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Gene_locus Report for: arath-T5M16.2

Arabidopsis thaliana (Mouse-ear cress) AtMAGL5 T5M16_2 At1g77420 putative lipase

Comment
AtMAGL5 monoacylglycerol lipase, Has no MAGL activity, targeted to the chloroplasts. Kim et al.2016


Relationship
Family|Monoglyceridelipase_lysophospholip
Block| X
Position in NCBI Life Tree|Arabidopsis thaliana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Brassicales: N E > Brassicaceae: N E > Camelineae: N E > Arabidopsis: N E > Arabidopsis thaliana: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 1 more: AC078898, AC010704, AY084373
1 Ncbi-nid : 12323375
1 Ncbi-pid : 12323393
2 UniProt : Q9FVW6, Q8LGA7
2 Interpro : Q9FVW6, Q8LGA7
2 Prodom : Q9FVW6, Q8LGA7
2 Pfam : Q9FVW6, Q8LGA7
2 PIRSF : Q9FVW6, Q8LGA7
2 SUPERFAM : Q9FVW6, Q8LGA7
1 Tair database : At1g77420
Sequence
Graphical view for this peptide sequence: arath-T5M16.2
Colored MSA for Monoglyceridelipase_lysophospholip (raw)
MDRALTPRFDTPATLSPFRYRYGSSLAITRRFAPAIVCAKRSPIDGVSDE
LNLIASQNLDQAPARRLARSAFVDLQLQLDHCLFKKAPSGIRTEEWYERN
SKGEDIFCKSWLPKSGDEIKAAVCFCHGYGSTCTFFFDGIAKQIAGFGYG
VYAIDHPGFGLSDGLHGHIPSFDDLADNAIEQFTKMKGRSELRNLPRFLL
GQSMGGAVALKIHLKEPQAWDGLILVAPMCKISEDVKPPPLVLKTLILMS
TLFPKAKLFPKRDLSDFFFRDLSKRKLCEYDVICYDDQTRLKTAVELLNA
TRDIEMQVDKVSLPLLILHGDTDKVTDPTVSKFLHKHAVSQDKTLKLYPG
GYHCILEGDTDENIFTVINDIVAWLDARVDPK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MDRALTPRFDTPATLSPFRYRYGSSLAITRRFAPAIVCAKRSPIDGVSDE
LNLIASQNLDQAPARRLARSAFVDLQLQLDHCLFKKAPSGIRTEEWYERN
SKGEDIFCKSWLPKSGDEIKAAVCFCHGYGSTCTFFFDGIAKQIAGFGYG
VYAIDHPGFGLSDGLHGHIPSFDDLADNAIEQFTKMKGRSELRNLPRFLL
GQSMGGAVALKIHLKEPQAWDGLILVAPMCKISEDVKPPPLVLKTLILMS
TLFPKAKLFPKRDLSDFFFRDLSKRKLCEYDVICYDDQTRLKTAVELLNA
TRDIEMQVDKVSLPLLILHGDTDKVTDPTVSKFLHKHAVSQDKTLKLYPG
GYHCILEGDTDENIFTVINDIVAWLDARVDPK


References
    Title: Molecular and biochemical characterizations of the monoacylglycerol lipase gene family of Arabidopsis thaliana
    Kim RJ, Kim HJ, Shim D, Suh MC
    Ref: Plant J, 85:758, 2016 : PubMed

            

    Title: Full-length messenger RNA sequences greatly improve genome annotation
    Haas BJ, Volfovsky N, Town CD, Troukhan M, Alexandrov N, Feldmann KA, Flavell RB, White O, Salzberg SL
    Ref: Genome Biol, 3:RESEARCH0029, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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