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References (46)

Title : The genome of the blood fluke Schistosoma mansoni - Berriman_2009_Nature_460_352
Author(s) : Berriman M , Haas BJ , LoVerde PT , Wilson RA , Dillon GP , Cerqueira GC , Mashiyama ST , Al-Lazikani B , Andrade LF , Ashton PD , Aslett MA , Bartholomeu DC , Blandin G , Caffrey CR , Coghlan A , Coulson R , Day TA , Delcher A , DeMarco R , Djikeng A , Eyre T , Gamble JA , Ghedin E , Gu Y , Hertz-Fowler C , Hirai H , Hirai Y , Houston R , Ivens A , Johnston DA , Lacerda D , Macedo CD , McVeigh P , Ning Z , Oliveira G , Overington JP , Parkhill J , Pertea M , Pierce RJ , Protasio AV , Quail MA , Rajandream MA , Rogers J , Sajid M , Salzberg SL , Stanke M , Tivey AR , White O , Williams DL , Wortman J , Wu W , Zamanian M , Zerlotini A , Fraser-Liggett CM , Barrell BG , El-Sayed NM
Ref : Nature , 460 :352 , 2009
Abstract :
PubMedSearch : Berriman_2009_Nature_460_352
PubMedID: 19606141
Gene_locus related to this paper: schma-ACHE1 , schma-ACHE2 , schma-c4qb79 , schma-c4qmk4 , schma-g4v9h7 , schma-BCHE , schma-g4vmf3

Title : Comparative genomics of the neglected human malaria parasite Plasmodium vivax - Carlton_2008_Nature_455_757
Author(s) : Carlton JM , Adams JH , Silva JC , Bidwell SL , Lorenzi H , Caler E , Crabtree J , Angiuoli SV , Merino EF , Amedeo P , Cheng Q , Coulson RM , Crabb BS , Del Portillo HA , Essien K , Feldblyum TV , Fernandez-Becerra C , Gilson PR , Gueye AH , Guo X , Kang'a S , Kooij TW , Korsinczky M , Meyer EV , Nene V , Paulsen I , White O , Ralph SA , Ren Q , Sargeant TJ , Salzberg SL , Stoeckert CJ , Sullivan SA , Yamamoto MM , Hoffman SL , Wortman JR , Gardner MJ , Galinski MR , Barnwell JW , Fraser-Liggett CM
Ref : Nature , 455 :757 , 2008
Abstract :
PubMedSearch : Carlton_2008_Nature_455_757
PubMedID: 18843361
Gene_locus related to this paper: plakh-b3lb44 , plavi-a5kcq0 , plavs-a5k2k6 , plavs-a5k3z4 , plavs-a5k4s6 , plavs-a5k5e4 , plavs-a5k7t5 , plavs-a5k686 , plavs-a5kaa1 , plavs-a5kaa3 , plavs-a5kas6 , plavs-a5kcm2

Title : Draft genome of the filarial nematode parasite Brugia malayi - Ghedin_2007_Science_317_1756
Author(s) : Ghedin E , Wang S , Spiro D , Caler E , Zhao Q , Crabtree J , Allen JE , Delcher AL , Guiliano DB , Miranda-Saavedra D , Angiuoli SV , Creasy T , Amedeo P , Haas B , El-Sayed NM , Wortman JR , Feldblyum T , Tallon L , Schatz M , Shumway M , Koo H , Salzberg SL , Schobel S , Pertea M , Pop M , White O , Barton GJ , Carlow CK , Crawford MJ , Daub J , Dimmic MW , Estes CF , Foster JM , Ganatra M , Gregory WF , Johnson NM , Jin J , Komuniecki R , Korf I , Kumar S , Laney S , Li BW , Li W , Lindblom TH , Lustigman S , Ma D , Maina CV , Martin DM , McCarter JP , McReynolds L , Mitreva M , Nutman TB , Parkinson J , Peregrin-Alvarez JM , Poole C , Ren Q , Saunders L , Sluder AE , Smith K , Stanke M , Unnasch TR , Ware J , Wei AD , Weil G , Williams DJ , Zhang Y , Williams SA , Fraser-Liggett C , Slatko B , Blaxter ML , Scott AL
Ref : Science , 317 :1756 , 2007
Abstract :
PubMedSearch : Ghedin_2007_Science_317_1756
PubMedID: 17885136
Gene_locus related to this paper: bruma-a8ndk6 , bruma-a8njt8 , bruma-a8nl88 , bruma-a8npi4 , bruma-a8npi6 , bruma-a8p6g9 , bruma-a8pah3 , bruma-a8pc38 , bruma-a8pek5 , bruma-a8piq4 , bruma-a8pnw8 , bruma-a8psu4 , bruma-a8pte1 , bruma-a8q606 , bruma-a8q632 , bruma-a8q937 , bruma-a8qav5 , bruma-a8qbd9 , bruma-a8qgj6 , bruma-a8qh78 , bruma-a8q143 , bruma-a0a024mej5 , bruma-a0a0k0jju9 , bruma-a0a0i9n517

Title : Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis - Carlton_2007_Science_315_207
Author(s) : Carlton JM , Hirt RP , Silva JC , Delcher AL , Schatz M , Zhao Q , Wortman JR , Bidwell SL , Alsmark UC , Besteiro S , Sicheritz-Ponten T , Noel CJ , Dacks JB , Foster PG , Simillion C , Van de Peer Y , Miranda-Saavedra D , Barton GJ , Westrop GD , Muller S , Dessi D , Fiori PL , Ren Q , Paulsen I , Zhang H , Bastida-Corcuera FD , Simoes-Barbosa A , Brown MT , Hayes RD , Mukherjee M , Okumura CY , Schneider R , Smith AJ , Vanacova S , Villalvazo M , Haas BJ , Pertea M , Feldblyum TV , Utterback TR , Shu CL , Osoegawa K , de Jong PJ , Hrdy I , Horvathova L , Zubacova Z , Dolezal P , Malik SB , Logsdon JM, Jr. , Henze K , Gupta A , Wang CC , Dunne RL , Upcroft JA , Upcroft P , White O , Salzberg SL , Tang P , Chiu CH , Lee YS , Embley TM , Coombs GH , Mottram JC , Tachezy J , Fraser-Liggett CM , Johnson PJ
Ref : Science , 315 :207 , 2007
Abstract :
PubMedSearch : Carlton_2007_Science_315_207
PubMedID: 17218520
Gene_locus related to this paper: triva-a2d7i4 , triva-a2d9w5 , triva-a2d766 , triva-a2dah5 , triva-a2dlx9 , triva-a2dul1 , triva-a2dy49 , triva-a2e6h5 , triva-a2e7p9 , triva-a2e9l3 , triva-a2e414 , triva-a2e613 , triva-a2e983 , triva-a2eau8 , triva-a2ekb9 , triva-a2en58 , triva-a2erp5 , triva-a2et59 , triva-a2f7u4 , triva-a2f801 , triva-a2fa76 , triva-a2fbq3 , triva-a2fe47 , triva-a2fgl0 , triva-a2fhp7 , triva-a2fie6 , triva-a2fk22 , triva-a2fla2 , triva-a2fqm0 , triva-a2fqq2 , triva-a2frq0 , triva-a2frr3 , triva-a2fsq9 , triva-a2fsz5 , triva-a2fux4 , triva-a2fz57 , triva-a2g2h0 , triva-a2g9x0 , triva-a2fqi4

Title : Genome sequence of Aedes aegypti, a major arbovirus vector - Nene_2007_Science_316_1718
Author(s) : Nene V , Wortman JR , Lawson D , Haas B , Kodira C , Tu ZJ , Loftus B , Xi Z , Megy K , Grabherr M , Ren Q , Zdobnov EM , Lobo NF , Campbell KS , Brown SE , Bonaldo MF , Zhu J , Sinkins SP , Hogenkamp DG , Amedeo P , Arensburger P , Atkinson PW , Bidwell S , Biedler J , Birney E , Bruggner RV , Costas J , Coy MR , Crabtree J , Crawford M , Debruyn B , Decaprio D , Eiglmeier K , Eisenstadt E , El-Dorry H , Gelbart WM , Gomes SL , Hammond M , Hannick LI , Hogan JR , Holmes MH , Jaffe D , Johnston JS , Kennedy RC , Koo H , Kravitz S , Kriventseva EV , Kulp D , LaButti K , Lee E , Li S , Lovin DD , Mao C , Mauceli E , Menck CF , Miller JR , Montgomery P , Mori A , Nascimento AL , Naveira HF , Nusbaum C , O'Leary S , Orvis J , Pertea M , Quesneville H , Reidenbach KR , Rogers YH , Roth CW , Schneider JR , Schatz M , Shumway M , Stanke M , Stinson EO , Tubio JM , Vanzee JP , Verjovski-Almeida S , Werner D , White O , Wyder S , Zeng Q , Zhao Q , Zhao Y , Hill CA , Raikhel AS , Soares MB , Knudson DL , Lee NH , Galagan J , Salzberg SL , Paulsen IT , Dimopoulos G , Collins FH , Birren B , Fraser-Liggett CM , Severson DW
Ref : Science , 316 :1718 , 2007
Abstract :
PubMedSearch : Nene_2007_Science_316_1718
PubMedID: 17510324
Gene_locus related to this paper: aedae-ACHE , aedae-ACHE1 , aedae-glita , aedae-q0iea6 , aedae-q0iev6 , aedae-q0ifn6 , aedae-q0ifn8 , aedae-q0ifn9 , aedae-q0ifp0 , aedae-q0ig41 , aedae-q1dgl0 , aedae-q1dh03 , aedae-q1dh19 , aedae-q1hqe6 , aedae-Q8ITU8 , aedae-Q8MMJ6 , aedae-Q8T9V6 , aedae-q16e91 , aedae-q16f04 , aedae-q16f25 , aedae-q16f26 , aedae-q16f28 , aedae-q16f29 , aedae-q16f30 , aedae-q16gq5 , aedae-q16iq5 , aedae-q16je0 , aedae-q16je1 , aedae-q16je2 , aedae-q16ks8 , aedae-q16lf2 , aedae-q16lv6 , aedae-q16m61 , aedae-q16mc1 , aedae-q16mc6 , aedae-q16mc7 , aedae-q16md1 , aedae-q16ms7 , aedae-q16nk5 , aedae-q16rl5 , aedae-q16rz9 , aedae-q16si8 , aedae-q16t49 , aedae-q16wf1 , aedae-q16x18 , aedae-q16xp8 , aedae-q16xu6 , aedae-q16xw5 , aedae-q16xw6 , aedae-q16y04 , aedae-q16y05 , aedae-q16y06 , aedae-q16y07 , aedae-q16y39 , aedae-q16y40 , aedae-q16yg4 , aedae-q16z03 , aedae-q17aa7 , aedae-q17av1 , aedae-q17av2 , aedae-q17av3 , aedae-q17av4 , aedae-q17b28 , aedae-q17b29 , aedae-q17b30 , aedae-q17b31 , aedae-q17b32 , aedae-q17bm3 , aedae-q17bm4 , aedae-q17bv7 , aedae-q17c44 , aedae-q17cz1 , aedae-q17d32 , aedae-q17g39 , aedae-q17g40 , aedae-q17g41 , aedae-q17g42 , aedae-q17g43 , aedae-q17g44 , aedae-q17gb8 , aedae-q17gr3 , aedae-q17if7 , aedae-q17if9 , aedae-q17ig1 , aedae-q17ig2 , aedae-q17is4 , aedae-q17l09 , aedae-q17m26 , aedae-q17mg9 , aedae-q17mv4 , aedae-q17mv5 , aedae-q17mv6 , aedae-q17mv7 , aedae-q17mw8 , aedae-q17mw9 , aedae-q17nw5 , aedae-q17nx5 , aedae-q17pa4 , aedae-q17q69 , aedae-q170k7 , aedae-q171y4 , aedae-q172e0 , aedae-q176i8 , aedae-q176j0 , aedae-q177k1 , aedae-q177k2 , aedae-q177l9 , aedae-j9hic3 , aedae-q179r9 , aedae-u483 , aedae-j9hj23 , aedae-q17d68 , aedae-q177c7 , aedae-q0ifp1 , aedae-a0a1s4fx83 , aedae-a0a1s4g2m0 , aedae-q1hr49

Title : Genome sequence of Babesia bovis and comparative analysis of apicomplexan hemoprotozoa - Brayton_2007_PLoS.Pathog_3_1401
Author(s) : Brayton KA , Lau AO , Herndon DR , Hannick L , Kappmeyer LS , Berens SJ , Bidwell SL , Brown WC , Crabtree J , Fadrosh D , Feldblum T , Forberger HA , Haas BJ , Howell JM , Khouri H , Koo H , Mann DJ , Norimine J , Paulsen IT , Radune D , Ren Q , Smith RK, Jr. , Suarez CE , White O , Wortman JR , Knowles DP, Jr. , McElwain TF , Nene VM
Ref : PLoS Pathog , 3 :1401 , 2007
Abstract :
PubMedSearch : Brayton_2007_PLoS.Pathog_3_1401
PubMedID: 17953480
Gene_locus related to this paper: babbo-a7amu4 , babbo-a7as90 , babbo-a7au28 , babbo-a7avh4

Title : Comparative genomics of emerging human ehrlichiosis agents - Dunning Hotopp_2006_PLoS.Genet_2_e21
Author(s) : Dunning Hotopp JC , Lin M , Madupu R , Crabtree J , Angiuoli SV , Eisen JA , Seshadri R , Ren Q , Wu M , Utterback TR , Smith S , Lewis M , Khouri H , Zhang C , Niu H , Lin Q , Ohashi N , Zhi N , Nelson W , Brinkac LM , Dodson RJ , Rosovitz MJ , Sundaram J , Daugherty SC , Davidsen T , Durkin AS , Gwinn M , Haft DH , Selengut JD , Sullivan SA , Zafar N , Zhou L , Benahmed F , Forberger H , Halpin R , Mulligan S , Robinson J , White O , Rikihisa Y , Tettelin H
Ref : PLoS Genet , 2 :e21 , 2006
Abstract :
PubMedSearch : Dunning Hotopp_2006_PLoS.Genet_2_e21
PubMedID: 16482227
Gene_locus related to this paper: anapz-q2gj80 , anapz-q2gle9 , anapz-q2glf0 , anapz-q2gln7 , ehrch-q40iu0 , ehrch-q40jj7 , ehrcr-q2gfq9 , neosm-q2gcq8 , neosm-q2gdf2 , neosm-q2gcn8 , anapz-q2gk48 , ehrcr-q2ggj6

Title : Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition - Joardar_2005_J.Bacteriol_187_6488
Author(s) : Joardar V , Lindeberg M , Jackson RW , Selengut J , Dodson R , Brinkac LM , Daugherty SC , Deboy R , Durkin AS , Giglio MG , Madupu R , Nelson WC , Rosovitz MJ , Sullivan S , Crabtree J , Creasy T , Davidsen T , Haft DH , Zafar N , Zhou L , Halpin R , Holley T , Khouri H , Feldblyum T , White O , Fraser CM , Chatterjee AK , Cartinhour S , Schneider DJ , Mansfield J , Collmer A , Buell CR
Ref : Journal of Bacteriology , 187 :6488 , 2005
Abstract :
PubMedSearch : Joardar_2005_J.Bacteriol_187_6488
PubMedID: 16159782
Gene_locus related to this paper: pse14-q48cb3 , pse14-q48ck7 , pse14-q48cs3 , pse14-q48ct2 , pse14-q48d82 , pse14-q48da3 , pse14-q48dj9 , pse14-q48dq5 , pse14-q48e33 , pse14-q48es1 , pse14-q48f84 , pse14-q48fg2 , pse14-q48g47 , pse14-q48g51 , pse14-q48gq9 , pse14-q48h40 , pse14-q48ha4 , pse14-q48hb4 , pse14-q48he1 , pse14-q48hq0 , pse14-q48hq2 , pse14-q48ia0 , pse14-q48im0 , pse14-q48j48 , pse14-q48ji2 , pse14-q48k54 , pse14-q48k55 , pse14-q48k63 , pse14-q48kc1 , pse14-q48kt9 , pse14-q48ku0 , pse14-q48lb6 , pse14-q48lj1 , pse14-q48ln2 , pse14-q48m56 , pse14-q48mh5 , pse14-q48mq7 , pse14-q48nt0 , pse14-q48p24 , pse14-q48pi7 , pse14-q48pi8 , pse14-q48pi9 , pse14-q48pq2 , pse14-q48pq5 , psesm-METX , psesm-q87y20 , psesm-q889k3 , psesy-PIP , psesy-PSPTO0162 , psesy-PSPTO1766 , psesy-PSPTO2134 , psesy-PSPTO3135 , pseu2-q4zwv7 , psesg-e7p3i0

Title : Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial pan-genome - Tettelin_2005_Proc.Natl.Acad.Sci.U.S.A_102_13950
Author(s) : Tettelin H , Masignani V , Cieslewicz MJ , Donati C , Medini D , Ward NL , Angiuoli SV , Crabtree J , Jones AL , Durkin AS , DeBoy RT , Davidsen TM , Mora M , Scarselli M , Margarit y Ros I , Peterson JD , Hauser CR , Sundaram JP , Nelson WC , Madupu R , Brinkac LM , Dodson RJ , Rosovitz MJ , Sullivan SA , Daugherty SC , Haft DH , Selengut J , Gwinn ML , Zhou L , Zafar N , Khouri H , Radune D , Dimitrov G , Watkins K , O'Connor KJ , Smith S , Utterback TR , White O , Rubens CE , Grandi G , Madoff LC , Kasper DL , Telford JL , Wessels MR , Rappuoli R , Fraser CM
Ref : Proc Natl Acad Sci U S A , 102 :13950 , 2005
Abstract :
PubMedSearch : Tettelin_2005_Proc.Natl.Acad.Sci.U.S.A_102_13950
PubMedID: 16172379
Gene_locus related to this paper: strag-ESTA , strag-GBS0040 , strag-GBS0107 , strag-GBS1828 , strag-pepx , strag-q3dah6 , strag-SAG0246 , strag-SAG0383 , strag-SAG0679 , strag-SAG0680 , strag-SAG0785 , strag-SAG0912 , strag-SAG1562 , strag-SAG2132

Title : The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease - El-Sayed_2005_Science_309_409
Author(s) : El-Sayed NM , Myler PJ , Bartholomeu DC , Nilsson D , Aggarwal G , Tran AN , Ghedin E , Worthey EA , Delcher AL , Blandin G , Westenberger SJ , Caler E , Cerqueira GC , Branche C , Haas B , Anupama A , Arner E , Aslund L , Attipoe P , Bontempi E , Bringaud F , Burton P , Cadag E , Campbell DA , Carrington M , Crabtree J , Darban H , da Silveira JF , de Jong P , Edwards K , Englund PT , Fazelina G , Feldblyum T , Ferella M , Frasch AC , Gull K , Horn D , Hou L , Huang Y , Kindlund E , Klingbeil M , Kluge S , Koo H , Lacerda D , Levin MJ , Lorenzi H , Louie T , Machado CR , McCulloch R , McKenna A , Mizuno Y , Mottram JC , Nelson S , Ochaya S , Osoegawa K , Pai G , Parsons M , Pentony M , Pettersson U , Pop M , Ramirez JL , Rinta J , Robertson L , Salzberg SL , Sanchez DO , Seyler A , Sharma R , Shetty J , Simpson AJ , Sisk E , Tammi MT , Tarleton R , Teixeira S , Van Aken S , Vogt C , Ward PN , Wickstead B , Wortman J , White O , Fraser CM , Stuart KD , Andersson B
Ref : Science , 309 :409 , 2005
Abstract :
PubMedSearch : El-Sayed_2005_Science_309_409
PubMedID: 16020725
Gene_locus related to this paper: tryb2-q6h9e3 , tryb2-q6ha27 , tryb2-q38cd5 , tryb2-q38cd6 , tryb2-q38cd7 , tryb2-q38dc1 , tryb2-q38de4 , tryb2-q38ds6 , tryb2-q38dx1 , tryb2-q380z6 , tryb2-q382l4 , tryb2-q383a9 , tryb2-q386e3 , tryb2-q387r7 , tryb2-q388n1 , tryb2-q389w3 , trybr-PEPTB , trycr-q4cq28 , trycr-q4cq94 , trycr-q4cq95 , trycr-q4cq96 , trycr-q4cqq5 , trycr-q4csm0 , trycr-q4cwv3 , trycr-q4cx66 , trycr-q4cxr6 , trycr-q4cyc3 , trycr-q4cyc5 , trycr-q4cyf6 , trycr-q4czy3 , trycr-q4d1s2 , trycr-q4d2n1 , trycr-q4d3a2 , trycr-q4d3x3 , trycr-q4d3y4 , trycr-q4d6h1 , trycr-q4d8h8 , trycr-q4d8h9 , trycr-q4d8i0 , trycr-q4d786 , trycr-q4d975 , trycr-q4da08 , trycr-q4dab1 , trycr-q4dap6 , trycr-q4dap7 , trycr-q4dbm2 , trycr-q4dbn1 , trycr-q4ddw7 , trycr-q4de42 , trycr-q4dhn8 , trycr-q4dkk8 , trycr-q4dkk9 , trycr-q4dm56 , trycr-q4dp03 , trycr-q4dqa6 , trycr-q4dry8 , trycr-q4dt91 , trycr-q4dvl8 , trycr-q4dvp1 , trycr-q4dvp2 , trycr-q4dw34 , trycr-q4dwm3 , trycr-q4dy49 , trycr-q4dy82 , trycr-q4dzp6 , trycr-q4e3m8 , trycr-q4e4t5 , trycr-q4e5d1 , trycr-q4e5z2 , trycr-q6y3z8 , trycr-Q94795 , trycr-TCPO

Title : The genome of the African trypanosome Trypanosoma brucei - Berriman_2005_Science_309_416
Author(s) : Berriman M , Ghedin E , Hertz-Fowler C , Blandin G , Renauld H , Bartholomeu DC , Lennard NJ , Caler E , Hamlin NE , Haas B , Bohme U , Hannick L , Aslett MA , Shallom J , Marcello L , Hou L , Wickstead B , Alsmark UC , Arrowsmith C , Atkin RJ , Barron AJ , Bringaud F , Brooks K , Carrington M , Cherevach I , Chillingworth TJ , Churcher C , Clark LN , Corton CH , Cronin A , Davies RM , Doggett J , Djikeng A , Feldblyum T , Field MC , Fraser A , Goodhead I , Hance Z , Harper D , Harris BR , Hauser H , Hostetler J , Ivens A , Jagels K , Johnson D , Johnson J , Jones K , Kerhornou AX , Koo H , Larke N , Landfear S , Larkin C , Leech V , Line A , Lord A , MacLeod A , Mooney PJ , Moule S , Martin DM , Morgan GW , Mungall K , Norbertczak H , Ormond D , Pai G , Peacock CS , Peterson J , Quail MA , Rabbinowitsch E , Rajandream MA , Reitter C , Salzberg SL , Sanders M , Schobel S , Sharp S , Simmonds M , Simpson AJ , Tallon L , Turner CM , Tait A , Tivey AR , Van Aken S , Walker D , Wanless D , Wang S , White B , White O , Whitehead S , Woodward J , Wortman J , Adams MD , Embley TM , Gull K , Ullu E , Barry JD , Fairlamb AH , Opperdoes F , Barrell BG , Donelson JE , Hall N , Fraser CM , Melville SE , El-Sayed NM
Ref : Science , 309 :416 , 2005
Abstract :
PubMedSearch : Berriman_2005_Science_309_416
PubMedID: 16020726
Gene_locus related to this paper: tryb2-q6h9e3 , tryb2-q6ha27 , tryb2-q38cd5 , tryb2-q38cd6 , tryb2-q38cd7 , tryb2-q38dc1 , tryb2-q38de4 , tryb2-q38ds6 , tryb2-q38dx1 , tryb2-q380z6 , tryb2-q382c1 , tryb2-q382l4 , tryb2-q383a9 , tryb2-q386e3 , tryb2-q387r7 , tryb2-q388n1 , tryb2-q389w3 , trybr-PEPTB , trycr-q4cq28 , trycr-q4cq94 , trycr-q4cq95 , trycr-q4cq96 , trycr-q4csm0 , trycr-q4cwv3 , trycr-q4cx66 , trycr-q4cxr6 , trycr-q4cyc5 , trycr-q4cyf6 , trycr-q4d3a2 , trycr-q4d3x3 , trycr-q4d3y4 , trycr-q4d6h1 , trycr-q4d8h8 , trycr-q4d8h9 , trycr-q4d8i0 , trycr-q4d786 , trycr-q4d975 , trycr-q4da08 , trycr-q4dap6 , trycr-q4dbm2 , trycr-q4dbn1 , trycr-q4ddw7 , trycr-q4de42 , trycr-q4dhn8 , trycr-q4dkk8 , trycr-q4dkk9 , trycr-q4dm56 , trycr-q4dqa6 , trycr-q4dt91 , trycr-q4dvp2 , trycr-q4dw34 , trycr-q4dwm3 , trycr-q4dy49 , trycr-q4dy82 , trycr-q4dzp6 , trycr-q4e3m8 , trycr-q4e4t5 , trycr-q4e5d1 , trycr-q4e5z2

Title : Comparative genomics of trypanosomatid parasitic protozoa - El-Sayed_2005_Science_309_404
Author(s) : El-Sayed NM , Myler PJ , Blandin G , Berriman M , Crabtree J , Aggarwal G , Caler E , Renauld H , Worthey EA , Hertz-Fowler C , Ghedin E , Peacock C , Bartholomeu DC , Haas BJ , Tran AN , Wortman JR , Alsmark UC , Angiuoli S , Anupama A , Badger J , Bringaud F , Cadag E , Carlton JM , Cerqueira GC , Creasy T , Delcher AL , Djikeng A , Embley TM , Hauser C , Ivens AC , Kummerfeld SK , Pereira-Leal JB , Nilsson D , Peterson J , Salzberg SL , Shallom J , Silva JC , Sundaram J , Westenberger S , White O , Melville SE , Donelson JE , Andersson B , Stuart KD , Hall N
Ref : Science , 309 :404 , 2005
Abstract :
PubMedSearch : El-Sayed_2005_Science_309_404
PubMedID: 16020724
Gene_locus related to this paper: tryb2-q382c1 , trycr-q4dhv2 , trycr-q4dpt2 , trycr-q4dpy4

Title : Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species - Buell_2005_Genome.Res_15_1284
Author(s) : Buell CR , Yuan Q , Ouyang S , Liu J , Zhu W , Wang A , Maiti R , Haas B , Wortman J , Pertea M , Jones KM , Kim M , Overton L , Tsitrin T , Fadrosh D , Bera J , Weaver B , Jin S , Johri S , Reardon M , Webb K , Hill J , Moffat K , Tallon L , Van Aken S , Lewis M , Utterback T , Feldblyum T , Zismann V , Iobst S , Hsiao J , de Vazeille AR , Salzberg SL , White O , Fraser C , Yu Y , Kim H , Rambo T , Currie J , Collura K , Kernodle-Thompson S , Wei F , Kudrna K , Ammiraju JS , Luo M , Goicoechea JL , Wing RA , Henry D , Oates R , Palmer M , Pries G , Saski C , Simmons J , Soderlund C , Nelson W , de la Bastide M , Spiegel L , Nascimento L , Huang E , Preston R , Zutavern T , Palmer LE , O'Shaughnessy A , Dike S , McCombie WR , Minx P , Cordum H , Wilson R , Jin W , Lee HR , Jiang J , Jackson S
Ref : Genome Res , 15 :1284 , 2005
Abstract :
PubMedSearch : Buell_2005_Genome.Res_15_1284
PubMedID: 16109971
Gene_locus related to this paper: orysa-Q852M6 , orysa-Q8S5X5 , orysa-Q84QZ6 , orysa-Q84QY7 , orysa-Q851E3 , orysa-q6ave2 , orysj-cgep , orysj-q0dud7 , orysj-q10j20 , orysj-q10ss2

Title : Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus - Nierman_2005_Nature_438_1151
Author(s) : Nierman WC , Pain A , Anderson MJ , Wortman JR , Kim HS , Arroyo J , Berriman M , Abe K , Archer DB , Bermejo C , Bennett J , Bowyer P , Chen D , Collins M , Coulsen R , Davies R , Dyer PS , Farman M , Fedorova N , Feldblyum TV , Fischer R , Fosker N , Fraser A , Garcia JL , Garcia MJ , Goble A , Goldman GH , Gomi K , Griffith-Jones S , Gwilliam R , Haas B , Haas H , Harris D , Horiuchi H , Huang J , Humphray S , Jimenez J , Keller N , Khouri H , Kitamoto K , Kobayashi T , Konzack S , Kulkarni R , Kumagai T , Lafon A , Latge JP , Li W , Lord A , Lu C , Majoros WH , May GS , Miller BL , Mohamoud Y , Molina M , Monod M , Mouyna I , Mulligan S , Murphy L , O'Neil S , Paulsen I , Penalva MA , Pertea M , Price C , Pritchard BL , Quail MA , Rabbinowitsch E , Rawlins N , Rajandream MA , Reichard U , Renauld H , Robson GD , Rodriguez de Cordoba S , Rodriguez-Pena JM , Ronning CM , Rutter S , Salzberg SL , Sanchez M , Sanchez-Ferrero JC , Saunders D , Seeger K , Squares R , Squares S , Takeuchi M , Tekaia F , Turner G , Vazquez de Aldana CR , Weidman J , White O , Woodward J , Yu JH , Fraser C , Galagan JE , Asai K , Machida M , Hall N , Barrell B , Denning DW
Ref : Nature , 438 :1151 , 2005
Abstract :
PubMedSearch : Nierman_2005_Nature_438_1151
PubMedID: 16372009
Gene_locus related to this paper: aspfc-b0xp50 , aspfc-b0xu40 , aspfc-b0xzj6 , aspfc-dpp5 , aspfu-apth1 , aspfu-axe1 , aspfu-CBPYA , aspfu-faec , aspfu-kex1 , aspfu-ppme1 , aspfu-q4wa39 , aspfu-q4wa78 , aspfu-q4wf56 , aspfu-q4wg73 , aspfu-q4wk44 , aspfu-q4wkh6 , aspfu-q4wnx3 , aspfu-q4wpb9 , aspfu-q4wqv2 , aspfu-q4wub2 , aspfu-q4wxr1 , aspfu-q4x0n6 , aspfu-q4x1n0 , aspfu-q5vjg7 , neofi-a1cwa6 , neofi-a1dfr9 , aspfm-a0a084bf80 , aspfu-fmac

Title : Structural flexibility in the Burkholderia mallei genome - Nierman_2004_Proc.Natl.Acad.Sci.U.S.A_101_14246
Author(s) : Nierman WC , DeShazer D , Kim HS , Tettelin H , Nelson KE , Feldblyum T , Ulrich RL , Ronning CM , Brinkac LM , Daugherty SC , Davidsen TD , DeBoy RT , Dimitrov G , Dodson RJ , Durkin AS , Gwinn ML , Haft DH , Khouri H , Kolonay JF , Madupu R , Mohammoud Y , Nelson WC , Radune D , Romero CM , Sarria S , Selengut J , Shamblin C , Sullivan SA , White O , Yu Y , Zafar N , Zhou L , Fraser CM
Ref : Proc Natl Acad Sci U S A , 101 :14246 , 2004
Abstract :
PubMedSearch : Nierman_2004_Proc.Natl.Acad.Sci.U.S.A_101_14246
PubMedID: 15377793
Gene_locus related to this paper: burma-a5j5w8 , burma-a5tj72 , burma-a5tq93 , burma-metx , burma-q62a61 , burma-q62ar2.1 , burma-q62ar2.2 , burma-q62ax8 , burma-q62b60 , burma-q62b79 , burma-q62bh9 , burma-q62bl4 , burma-q62bl7 , burma-q62c00 , burma-q62cg5 , burma-q62d41 , burma-q62d56 , burma-q62d83 , burma-q62dg2 , burma-q62du7 , burma-q62e67 , burma-q62eb8 , burma-q62ed8 , burma-q62f28 , burma-q62fx7 , burma-q62g26 , burma-q62gx9 , burma-q62gy2 , burma-q62hq2 , burma-q62i62 , burma-q62ib8 , burma-q62ie8 , burma-q62j07 , burma-q62j15 , burma-q62jn5 , burma-q62jy7 , burma-q62kb7 , burma-q62kg0 , burma-q62kh9 , burma-q62lp7 , burma-q62m40 , burma-q62mc3 , burma-q62mf4 , burma-q62mq7 , burma-q629m1 , burma-q629p4 , burma-q629u0 , burps-q3v7s4 , burps-hboh

Title : Whole genome comparisons of serotype 4b and 1\/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species - Nelson_2004_Nucleic.Acids.Res_32_2386
Author(s) : Nelson KE , Fouts DE , Mongodin EF , Ravel J , DeBoy RT , Kolonay JF , Rasko DA , Angiuoli SV , Gill SR , Paulsen IT , Peterson J , White O , Nelson WC , Nierman W , Beanan MJ , Brinkac LM , Daugherty SC , Dodson RJ , Durkin AS , Madupu R , Haft DH , Selengut J , Van Aken S , Khouri H , Fedorova N , Forberger H , Tran B , Kathariou S , Wonderling LD , Uhlich GA , Bayles DO , Luchansky JB , Fraser CM
Ref : Nucleic Acids Research , 32 :2386 , 2004
Abstract :
PubMedSearch : Nelson_2004_Nucleic.Acids.Res_32_2386
PubMedID: 15115801
Gene_locus related to this paper: lismc-c1l0d9 , lismf-q71xq4 , lismo-LMO0110 , lismo-LMO0493 , lismo-LMO0580 , lismo-LMO0752 , lismo-LMO0760 , lismo-LMO0857 , lismo-LMO0950 , lismo-LMO0951 , lismo-LMO0977 , lismo-LMO1128 , lismo-LMO1258 , lismo-LMO1674 , lismo-LMO2089 , lismo-LMO2109 , lismo-LMO2433 , lismo-LMO2450 , lismo-LMO2452 , lismo-LMO2453 , lismo-LMO2578 , lismo-LMO2677 , lismo-LMO2755 , lismo-metx

Title : The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria - Read_2003_Nature_423_81
Author(s) : Read TD , Peterson SN , Tourasse N , Baillie LW , Paulsen IT , Nelson KE , Tettelin H , Fouts DE , Eisen JA , Gill SR , Holtzapple EK , Okstad OA , Helgason E , Rilstone J , Wu M , Kolonay JF , Beanan MJ , Dodson RJ , Brinkac LM , Gwinn M , DeBoy RT , Madpu R , Daugherty SC , Durkin AS , Haft DH , Nelson WC , Peterson JD , Pop M , Khouri HM , Radune D , Benton JL , Mahamoud Y , Jiang L , Hance IR , Weidman JF , Berry KJ , Plaut RD , Wolf AM , Watkins KL , Nierman WC , Hazen A , Cline R , Redmond C , Thwaite JE , White O , Salzberg SL , Thomason B , Friedlander AM , Koehler TM , Hanna PC , Kolsto AB , Fraser CM
Ref : Nature , 423 :81 , 2003
Abstract :
PubMedSearch : Read_2003_Nature_423_81
PubMedID: 12721629
Gene_locus related to this paper: bacan-BA0160 , bacan-BA0950 , bacan-BA0954 , bacan-BA1019 , bacan-BA1242 , bacan-BA1727 , bacan-BA1747 , bacan-BA1866 , bacan-BA1914 , bacan-BA2015 , bacan-BA2392 , bacan-BA2417 , bacan-BA2557 , bacan-BA2607 , bacan-BA2687 , bacan-BA2694 , bacan-BA2738 , bacan-BA2865 , bacan-BA3068 , bacan-BA3165 , bacan-BA3178 , bacan-BA3187 , bacan-BA3343 , bacan-BA3372 , bacan-BA3703 , bacan-BA3805 , bacan-BA3863 , bacan-BA3877 , bacan-BA3887 , bacan-BA4324 , bacan-BA4328 , bacan-BA4338 , bacan-BA4577 , bacan-BA4983 , bacan-BA5009 , bacan-BA5110 , bacan-BA5136 , bacan-DHBF , bacan-q81tt2 , bacce-BC0192 , bacce-BC1788 , bacce-BC1954 , bacce-BC2141 , bacce-BC2171 , bacce-BC4730 , bacce-BC4862 , bacce-BC5130 , bacce-PHAC , bacce-q72yu1 , baccr-pepx

Title : The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000 - Buell_2003_Proc.Natl.Acad.Sci.U.S.A_100_10181
Author(s) : Buell CR , Joardar V , Lindeberg M , Selengut J , Paulsen IT , Gwinn ML , Dodson RJ , DeBoy RT , Durkin AS , Kolonay JF , Madupu R , Daugherty S , Brinkac L , Beanan MJ , Haft DH , Nelson WC , Davidsen T , Zafar N , Zhou L , Liu J , Yuan Q , Khouri H , Fedorova N , Tran B , Russell D , Berry K , Utterback T , Van Aken SE , Feldblyum TV , D'Ascenzo M , Deng WL , Ramos AR , Alfano JR , Cartinhour S , Chatterjee AK , Delaney TP , Lazarowitz SG , Martin GB , Schneider DJ , Tang X , Bender CL , White O , Fraser CM , Collmer A
Ref : Proc Natl Acad Sci U S A , 100 :10181 , 2003
Abstract :
PubMedSearch : Buell_2003_Proc.Natl.Acad.Sci.U.S.A_100_10181
PubMedID: 12928499
Gene_locus related to this paper: pse14-q48ia0 , psesm-IRP1 , psesm-METX , psesm-q87y20 , psesm-q88a39 , psesm-q881b4 , psesm-q889k3 , psesy-BIOH , psesy-CFA7 , psesy-CFA9 , psesy-CMAT , psesy-ESTA , psesy-IRP4 , psesy-PHAB , psesy-PHAC , psesy-PHAG1 , psesy-PHAG2 , psesy-PIP , psesy-PSPTO0162 , psesy-PSPTO0421 , psesy-PSPTO0508 , psesy-PSPTO0675 , psesy-PSPTO0715 , psesy-PSPTO1154 , psesy-PSPTO1504 , psesy-PSPTO1559 , psesy-PSPTO1580 , psesy-PSPTO1604 , psesy-PSPTO1677 , psesy-PSPTO1766 , psesy-PSPTO1863 , psesy-PSPTO2042 , psesy-PSPTO2134 , psesy-PSPTO2150 , psesy-PSPTO2209 , psesy-PSPTO2217 , psesy-PSPTO2218 , psesy-PSPTO2293 , psesy-PSPTO2495 , psesy-PSPTO2674 , psesy-PSPTO2830 , psesy-PSPTO3135 , psesy-PSPTO3138 , psesy-PSPTO3264 , psesy-PSPTO3282 , psesy-PSPTO3306 , psesy-PSPTO3485 , psesy-PSPTO3572 , psesy-PSPTO3911 , psesy-PSPTO4089 , psesy-PSPTO4178 , psesy-PSPTO4277 , psesy-PSPTO4430 , psesy-PSPTO4519 , psesy-PSPTO4540 , psesy-PSPTO4699 , psesy-PSPTO4708 , psesy-PSPTO4781 , psesy-PSPTO4843 , psesy-PSPTO4964 , psesy-PSPTO5218 , psesy-PSPTO5299 , psesy-PSPTO5448 , psesy-PSPTO5537 , psesy-SYLD , psesy-SYPC , psesy-SYRE , psesm-q87v84

Title : Genome of Geobacter sulfurreducens: metal reduction in subsurface environments - Methe_2003_Science_302_1967
Author(s) : Methe BA , Nelson KE , Eisen JA , Paulsen IT , Nelson W , Heidelberg JF , Wu D , Wu M , Ward N , Beanan MJ , Dodson RJ , Madupu R , Brinkac LM , Daugherty SC , DeBoy RT , Durkin AS , Gwinn M , Kolonay JF , Sullivan SA , Haft DH , Selengut J , Davidsen TM , Zafar N , White O , Tran B , Romero C , Forberger HA , Weidman J , Khouri H , Feldblyum TV , Utterback TR , Van Aken SE , Lovley DR , Fraser CM
Ref : Science , 302 :1967 , 2003
Abstract :
PubMedSearch : Methe_2003_Science_302_1967
PubMedID: 14671304
Gene_locus related to this paper: geosl-q74a54 , geosl-q74ac8 , geosl-q74eb1 , geosl-q747u4 , geosl-q747v8 , geosl-q749w4

Title : Genome sequence of Chlamydophila caviae (Chlamydia psittaci GPIC): examining the role of niche-specific genes in the evolution of the Chlamydiaceae - Read_2003_Nucleic.Acids.Res_31_2134
Author(s) : Read TD , Myers GS , Brunham RC , Nelson WC , Paulsen IT , Heidelberg J , Holtzapple E , Khouri H , Federova NB , Carty HA , Umayam LA , Haft DH , Peterson J , Beanan MJ , White O , Salzberg SL , Hsia RC , McClarty G , Rank RG , Bavoil PM , Fraser CM
Ref : Nucleic Acids Research , 31 :2134 , 2003
Abstract :
PubMedSearch : Read_2003_Nucleic.Acids.Res_31_2134
PubMedID: 12682364
Gene_locus related to this paper: chlca-CCA00443 , chlca-CCA00510 , chlca-CCA00609 , chlca-CCA00614 , chlcv-p94660

Title : The genome of M. acetivorans reveals extensive metabolic and physiological diversity - Galagan_2002_Genome.Res_12_532
Author(s) : Galagan JE , Nusbaum C , Roy A , Endrizzi MG , Macdonald P , FitzHugh W , Calvo S , Engels R , Smirnov S , Atnoor D , Brown A , Allen N , Naylor J , Stange-Thomann N , DeArellano K , Johnson R , Linton L , McEwan P , McKernan K , Talamas J , Tirrell A , Ye W , Zimmer A , Barber RD , Cann I , Graham DE , Grahame DA , Guss AM , Hedderich R , Ingram-Smith C , Kuettner HC , Krzycki JA , Leigh JA , Li W , Liu J , Mukhopadhyay B , Reeve JN , Smith K , Springer TA , Umayam LA , White O , White RH , Conway de Macario E , Ferry JG , Jarrell KF , Jing H , Macario AJ , Paulsen I , Pritchett M , Sowers KR , Swanson RV , Zinder SH , Lander E , Metcalf WW , Birren B
Ref : Genome Res , 12 :532 , 2002
Abstract :
PubMedSearch : Galagan_2002_Genome.Res_12_532
PubMedID: 11932238
Gene_locus related to this paper: metac-MA0077 , metac-MA0362 , metac-MA0419 , metac-MA0736 , metac-MA0993 , metac-MA1571 , metac-MA1856 , metac-MA1857 , metac-MA2002 , metac-MA2343 , metac-MA2629 , metac-MA2691 , metac-MA2743 , metac-MA2933 , metac-MA3611 , metac-MA3635 , metac-MA3920 , metac-META

Title : The complete genome sequence of Chlorobium tepidum TLS, a photosynthetic, anaerobic, green-sulfur bacterium - Eisen_2002_Proc.Natl.Acad.Sci.U.S.A_99_9509
Author(s) : Eisen JA , Nelson KE , Paulsen IT , Heidelberg JF , Wu M , Dodson RJ , Deboy R , Gwinn ML , Nelson WC , Haft DH , Hickey EK , Peterson JD , Durkin AS , Kolonay JL , Yang F , Holt I , Umayam LA , Mason T , Brenner M , Shea TP , Parksey D , Nierman WC , Feldblyum TV , Hansen CL , Craven MB , Radune D , Vamathevan J , Khouri H , White O , Gruber TM , Ketchum KA , Venter JC , Tettelin H , Bryant DA , Fraser CM
Ref : Proceedings of the National Academy of Sciences of the United States of America , 99 :9509 , 2002
Abstract :
PubMedSearch : Eisen_2002_Proc.Natl.Acad.Sci.U.S.A_99_9509
PubMedID: 12093901
Gene_locus related to this paper: chlte-CT0177 , chlte-CT0524 , chlte-CT0717 , chlte-CT0947 , chlte-CT1208 , chlte-CT1253 , chlte-CT1301 , chlte-CT1312 , chlte-CT1856 , chlte-CT1908 , chlte-CT2087 , chlte-CT2271 , chlte-MENH , chlte-MET2 , chlte-q4w546 , chlte-q8kgb8

Title : Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440 - Nelson_2002_Environ.Microbiol_4_799
Author(s) : Nelson KE , Weinel C , Paulsen IT , Dodson RJ , Hilbert H , Martins dos Santos VA , Fouts DE , Gill SR , Pop M , Holmes M , Brinkac L , Beanan M , DeBoy RT , Daugherty S , Kolonay J , Madupu R , Nelson W , White O , Peterson J , Khouri H , Hance I , Chris Lee P , Holtzapple E , Scanlan D , Tran K , Moazzez A , Utterback T , Rizzo M , Lee K , Kosack D , Moestl D , Wedler H , Lauber J , Stjepandic D , Hoheisel J , Straetz M , Heim S , Kiewitz C , Eisen JA , Timmis KN , Dusterhoft A , Tummler B , Fraser CM
Ref : Environ Microbiol , 4 :799 , 2002
Abstract :
PubMedSearch : Nelson_2002_Environ.Microbiol_4_799
PubMedID: 12534463
Gene_locus related to this paper: psep1-a5wa77 , psep1-a5wax1 , psepk-q88nk6 , psepk-q88qt0 , psepu-acoc , psepu-BIOH , psepu-bpest , psepu-ESTB , psepu-LIP , psepu-METX , psepu-PHAC1 , psepu-PHAC2 , psepu-PHAG , psepu-PHAZ , psepu-PIP , psepu-PP0375 , psepu-PP0498 , psepu-PP0532 , psepu-PP1064 , psepu-PP1184 , psepu-PP1310 , psepu-PP1500 , psepu-PP1617 , psepu-PP1829 , psepu-PP1979 , psepu-PP2083 , psepu-PP2201 , psepu-PP2236 , psepu-PP2567 , psepu-PP2804 , psepu-PP2934 , psepu-PP3195 , psepu-PP3367 , psepu-PP3404 , psepu-PP3645 , psepu-PP3807 , psepu-PP3812 , psepu-PP3943 , psepu-PP4164 , psepu-PP4165 , psepu-PP4178 , psepu-PP4249 , psepu-PP4540 , psepu-PP4551 , psepu-PP4583 , psepu-PP4624 , psepu-PP4634 , psepu-PP4916 , psepu-PP5117 , psepu-PP5161 , psepu-PP5167 , psepu-PPSD , psepu-Q8KQK1 , psepu-q9wwz4

Title : The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts - Paulsen_2002_Proc.Natl.Acad.Sci.U.S.A_99_13148
Author(s) : Paulsen IT , Seshadri R , Nelson KE , Eisen JA , Heidelberg JF , Read TD , Dodson RJ , Umayam L , Brinkac LM , Beanan MJ , Daugherty SC , DeBoy RT , Durkin AS , Kolonay JF , Madupu R , Nelson WC , Ayodeji B , Kraul M , Shetty J , Malek J , Van Aken SE , Riedmuller S , Tettelin H , Gill SR , White O , Salzberg SL , Hoover DL , Lindler LE , Halling SM , Boyle SM , Fraser CM
Ref : Proc Natl Acad Sci U S A , 99 :13148 , 2002
Abstract :
PubMedSearch : Paulsen_2002_Proc.Natl.Acad.Sci.U.S.A_99_13148
PubMedID: 12271122
Gene_locus related to this paper: brume-BMEI0552 , brume-BMEI0733 , brume-BMEI1044 , brume-BMEI1119 , brume-BMEI1365 , brume-BMEI1594 , brume-BMEI1608 , brume-BMEI1822 , brume-BMEI1884 , brume-BMEI1951 , brume-BMEI2011 , brume-BMEII0047 , brume-BMEII0681 , brume-BMEII0989 , brume-PCAD , brusu-BR0288 , brusu-BR1291 , brusu-BR1327 , brusu-BRA0989

Title : Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains - Fleischmann_2002_J.Bacteriol_184_5479
Author(s) : Fleischmann RD , Alland D , Eisen JA , Carpenter L , White O , Peterson J , Deboy R , Dodson R , Gwinn M , Haft D , Hickey E , Kolonay JF , Nelson WC , Umayam LA , Ermolaeva M , Salzberg SL , Delcher A , Utterback T , Weidman J , Khouri H , Gill J , Mikula A , Bishai W , Jacobs Jr WR, Jr. , Venter JC , Fraser CM
Ref : Journal of Bacteriology , 184 :5479 , 2002
Abstract :
PubMedSearch : Fleischmann_2002_J.Bacteriol_184_5479
PubMedID: 12218036
Gene_locus related to this paper: myctu-a85a , myctu-a85b , myctu-a85c , myctu-bpoC , myctu-d5yk66 , myctu-ephA , myctu-ephB , myctu-ephc , myctu-ephd , myctu-ephE , myctu-ephF , myctu-hpx , myctu-linb , myctu-lipG , myctu-LPQP , myctu-MBTB , myctu-metx , myctu-mpt51 , myctu-MT3441 , myctu-p71654 , myctu-p95011 , myctu-PKS6 , myctu-PKS13 , myctu-ppe42 , myctu-ppe63 , myctu-Rv1430 , myctu-RV0045C , myctu-Rv0077c , myctu-Rv0151c , myctu-Rv0152c , myctu-Rv0159c , myctu-Rv0160c , myctu-rv0183 , myctu-Rv0217c , myctu-Rv0220 , myctu-Rv0272c , myctu-RV0293C , myctu-RV0421C , myctu-RV0457C , myctu-RV0519C , myctu-RV0774C , myctu-RV0782 , myctu-RV0840C , myctu-Rv1069c , myctu-Rv1076 , myctu-RV1123C , myctu-Rv1184c , myctu-Rv1190 , myctu-Rv1191 , myctu-RV1192 , myctu-RV1215C , myctu-Rv1399c , myctu-Rv1400c , myctu-RV1639C , myctu-RV1683 , myctu-RV1758 , myctu-Rv1800 , myctu-Rv1833c , myctu-Rv2045c , myctu-RV2054 , myctu-Rv2284 , myctu-RV2296 , myctu-Rv2385 , myctu-Rv2485c , myctu-RV2627C , myctu-RV2672 , myctu-RV2695 , myctu-RV2765 , myctu-RV2800 , myctu-RV2854 , myctu-Rv2970c , myctu-Rv3084 , myctu-Rv3097c , myctu-rv3177 , myctu-Rv3312c , myctu-RV3452 , myctu-Rv3487c , myctu-Rv3569c , myctu-Rv3591c , myctu-RV3724 , myctu-Rv3802c , myctu-Rv3822 , myctu-y0571 , myctu-y963 , myctu-Y1834 , myctu-y1835 , myctu-y2079 , myctu-Y2307 , myctu-yc88 , myctu-ym23 , myctu-ym24 , myctu-YR15 , myctu-yt28

Title : Genome sequence of the human malaria parasite Plasmodium falciparum - Gardner_2002_Nature_419_498
Author(s) : Gardner MJ , Hall N , Fung E , White O , Berriman M , Hyman RW , Carlton JM , Pain A , Nelson KE , Bowman S , Paulsen IT , James K , Eisen JA , Rutherford K , Salzberg SL , Craig A , Kyes S , Chan MS , Nene V , Shallom SJ , Suh B , Peterson J , Angiuoli S , Pertea M , Allen J , Selengut J , Haft D , Mather MW , Vaidya AB , Martin DM , Fairlamb AH , Fraunholz MJ , Roos DS , Ralph SA , McFadden GI , Cummings LM , Subramanian GM , Mungall C , Venter JC , Carucci DJ , Hoffman SL , Newbold C , Davis RW , Fraser CM , Barrell B
Ref : Nature , 419 :498 , 2002
Abstract :
PubMedSearch : Gardner_2002_Nature_419_498
PubMedID: 12368864
Gene_locus related to this paper: plaf7-c0h4q4 , plaf7-q8i5y6 , plaf7-q8iik5 , plafa-PF10.0018 , plafa-PF10.0020 , plafa-PF10.0379 , plafa-PF11.0211 , plafa-PF11.0276 , plafa-PF11.0441 , plafa-PF14.0015 , plafa-PF14.0017 , plafa-PF14.0099 , plafa-PF14.0250 , plafa-PF14.0395 , plafa-PF14.0737 , plafa-PF14.0738 , plafa-PFL2530W

Title : Sequence of Plasmodium falciparum chromosomes 2, 10, 11 and 14 - Gardner_2002_Nature_419_531
Author(s) : Gardner MJ , Shallom SJ , Carlton JM , Salzberg SL , Nene V , Shoaibi A , Ciecko A , Lynn J , Rizzo M , Weaver B , Jarrahi B , Brenner M , Parvizi B , Tallon L , Moazzez A , Granger D , Fujii C , Hansen C , Pederson J , Feldblyum T , Peterson J , Suh B , Angiuoli S , Pertea M , Allen J , Selengut J , White O , Cummings LM , Smith HO , Adams MD , Venter JC , Carucci DJ , Hoffman SL , Fraser CM
Ref : Nature , 419 :531 , 2002
Abstract :
PubMedSearch : Gardner_2002_Nature_419_531
PubMedID: 12368868
Gene_locus related to this paper: plafa-MAL3P8.11

Title : Genome sequence of the dissimilatory metal ion-reducing bacterium Shewanella oneidensis - Heidelberg_2002_Nat.Biotechnol_20_1118
Author(s) : Heidelberg JF , Paulsen IT , Nelson KE , Gaidos EJ , Nelson WC , Read TD , Eisen JA , Seshadri R , Ward N , Methe B , Clayton RA , Meyer T , Tsapin A , Scott J , Beanan M , Brinkac L , Daugherty S , DeBoy RT , Dodson RJ , Durkin AS , Haft DH , Kolonay JF , Madupu R , Peterson JD , Umayam LA , White O , Wolf AM , Vamathevan J , Weidman J , Impraim M , Lee K , Berry K , Lee C , Mueller J , Khouri H , Gill J , Utterback TR , McDonald LA , Feldblyum TV , Smith HO , Venter JC , Nealson KH , Fraser CM
Ref : Nat Biotechnol , 20 :1118 , 2002
Abstract :
PubMedSearch : Heidelberg_2002_Nat.Biotechnol_20_1118
PubMedID: 12368813
Gene_locus related to this paper: sheon-BIOH , sheon-LYPA , sheon-PIP , sheon-PTRB , sheon-q8ej95 , sheon-SO0071 , sheon-SO0614 , sheon-SO0616 , sheon-SO0801 , sheon-SO0880 , sheoe-SO0967 , sheon-SO1006 , sheon-SO1224 , sheon-SO1310 , sheon-SO1534 , sheon-SO1539 , sheon-SO1686 , sheon-SO1743 , sheon-SO1976 , sheon-SO1999 , sheon-SO2024 , sheon-SO2047 , sheon-SO2055 , sheon-SO2223 , sheon-SO2333 , sheon-SO2473 , sheon-SO2582 , sheon-SO2753 , sheon-SO2934 , sheon-SO3025 , sheon-SO3900 , sheon-SO3990 , sheon-SO4252 , sheon-SO4400 , sheon-SO4537 , sheon-SO4543 , sheon-SO4574 , sheon-SO4618 , sheon-SO4650 , sheon-SOA0048 , shefn-SfSFGH , sheon-ym51

Title : Full-length messenger RNA sequences greatly improve genome annotation - Haas_2002_Genome.Biol_3_RESEARCH0029
Author(s) : Haas BJ , Volfovsky N , Town CD , Troukhan M , Alexandrov N , Feldmann KA , Flavell RB , White O , Salzberg SL
Ref : Genome Biol , 3 :RESEARCH0029 , 2002
Abstract :
PubMedSearch : Haas_2002_Genome.Biol_3_RESEARCH0029
PubMedID: 12093376
Gene_locus related to this paper: arath-AT1G74640 , arath-At2g47630 , arath-AT4G17480 , arath-AT4G24380 , arath-At5g11650 , arath-AT5G19290 , arath-AT5G19630 , arath-AT5G20060 , arath-AT5G20520 , arath-AtD14 , arath-F1O17.3 , arath-F1O17.5 , arath-F1P2.110 , arath-F12L6.7 , arath-F22K18.40 , arath-At3g60340 , arath-LCAT1 , arath-PLA16 , arath-Q8L996 , arath-q8lae9 , arath-Q8LF34 , arath-Q8LFB7 , arath-Q8LFU1 , arath-q8s8g6 , arath-q9ffg7 , arath-Q9LNR2 , arath-SCP40 , arath-At4g12230 , arath-AT4G10030 , arath-T5M16.2 , arath-MES14 , arath-T19F11.2 , arath-Y1457 , arath-T26B15.8 , arath-SFGH , arath-f4jt64

Title : Complete genome sequence of Caulobacter crescentus - Nierman_2001_Proc.Natl.Acad.Sci.U.S.A_98_4136
Author(s) : Nierman WC , Feldblyum TV , Laub MT , Paulsen IT , Nelson KE , Eisen JA , Heidelberg JF , Alley MR , Ohta N , Maddock JR , Potocka I , Nelson WC , Newton A , Stephens C , Phadke ND , Ely B , DeBoy RT , Dodson RJ , Durkin AS , Gwinn ML , Haft DH , Kolonay JF , Smit J , Craven MB , Khouri H , Shetty J , Berry K , Utterback T , Tran K , Wolf A , Vamathevan J , Ermolaeva M , White O , Salzberg SL , Venter JC , Shapiro L , Fraser CM
Ref : Proc Natl Acad Sci U S A , 98 :4136 , 2001
Abstract :
PubMedSearch : Nierman_2001_Proc.Natl.Acad.Sci.U.S.A_98_4136
PubMedID: 11259647
Gene_locus related to this paper: caucr-CC0087 , caucr-CC0223 , caucr-CC0341 , caucr-CC0352 , caucr-CC0355 , caucr-CC0384 , caucr-CC0477 , caucr-CC0478 , caucr-CC0525 , caucr-CC0552 , caucr-CC0771 , caucr-CC0799 , caucr-CC0847 , caucr-CC0936 , caucr-CC0940 , caucr-CC1048 , caucr-CC1053 , caucr-CC1175 , caucr-CC1226 , caucr-CC1227 , caucr-CC1229 , caucr-CC1499 , caucr-CC1622 , caucr-CC1734 , caucr-CC1867 , caucr-CC1986 , caucr-CC2083 , caucr-CC2154 , caucr-CC2185 , caucr-CC2230 , caucr-CC2253 , caucr-CC2298 , caucr-CC2313 , caucr-CC2358 , caucr-CC2395 , caucr-CC2411 , caucr-CC2515 , caucr-CC2565 , caucr-CC2671 , caucr-CC2710 , caucr-CC2763 , caucr-CC2797 , caucr-CC3039 , caucr-CC3091 , caucr-CC3099 , caucr-CC3204 , caucr-CC3246 , caucr-CC3300 , caucr-CC3308 , caucr-CC3346 , caucr-CC3418 , caucr-CC3441 , caucr-CC3442 , caucr-CC3634 , caucr-CC3687 , caucr-CC3688 , caucr-CC3723 , caucr-CC3725 , caucr-CC3758 , caucr-PHAZ , caucr-PHBC , caucr-q9a8c1 , caucr-q9aac8

Title : Complete genome sequence of a virulent isolate of Streptococcus pneumoniae - Tettelin_2001_Science_293_498
Author(s) : Tettelin H , Nelson KE , Paulsen IT , Eisen JA , Read TD , Peterson S , Heidelberg J , DeBoy RT , Haft DH , Dodson RJ , Durkin AS , Gwinn M , Kolonay JF , Nelson WC , Peterson JD , Umayam LA , White O , Salzberg SL , Lewis MR , Radune D , Holtzapple E , Khouri H , Wolf AM , Utterback TR , Hansen CL , McDonald LA , Feldblyum TV , Angiuoli S , Dickinson T , Hickey EK , Holt IE , Loftus BJ , Yang F , Smith HO , Venter JC , Dougherty BA , Morrison DA , Hollingshead SK , Fraser CM
Ref : Science , 293 :498 , 2001
Abstract :
PubMedSearch : Tettelin_2001_Science_293_498
PubMedID: 11463916
Gene_locus related to this paper: strp2-q04l35 , strpj-b8zns7 , strpn-AXE1 , strpn-b2dz20 , strpn-pepx , strpn-SP0614 , strpn-SP0666 , strpn-SP0777 , strpn-SP0902 , strpn-SP1343

Title : Genome sequences of Chlamydia trachomatis MoPn and Chlamydia pneumoniae AR39 - Read_2000_Nucleic.Acids.Res_28_1397
Author(s) : Read TD , Brunham RC , Shen C , Gill SR , Heidelberg JF , White O , Hickey EK , Peterson J , Utterback T , Berry K , Bass S , Linher K , Weidman J , Khouri H , Craven B , Bowman C , Dodson R , Gwinn M , Nelson W , Deboy R , Kolonay J , McClarty G , Salzberg SL , Eisen J , Fraser CM
Ref : Nucleic Acids Research , 28 :1397 , 2000
Abstract :
PubMedSearch : Read_2000_Nucleic.Acids.Res_28_1397
PubMedID: 10684935
Gene_locus related to this paper: chlmu-TC0345 , chlmu-TC0413 , chlmu-TC0426 , chlmu-TC0478 , chlpn-CPJ0152 , chlpn-CPJ0342 , chlpn-CPN0161 , chlpn-CPN0271 , chlpn-q9jrv1 , chlpn-q9js10 , chlpn-q9k1u7 , chlpn-q9z6x9

Title : Complete genome sequence of Neisseria meningitidis serogroup B strain MC58 - Tettelin_2000_Science_287_1809
Author(s) : Tettelin H , Saunders NJ , Heidelberg J , Jeffries AC , Nelson KE , Eisen JA , Ketchum KA , Hood DW , Peden JF , Dodson RJ , Nelson WC , Gwinn ML , Deboy R , Peterson JD , Hickey EK , Haft DH , Salzberg SL , White O , Fleischmann RD , Dougherty BA , Mason T , Ciecko A , Parksey DS , Blair E , Cittone H , Clark EB , Cotton MD , Utterback TR , Khouri H , Qin H , Vamathevan J , Gill J , Scarlato V , Masignani V , Pizza M , Grandi G , Sun L , Smith HO , Fraser CM , Moxon ER , Rappuoli R , Venter JC
Ref : Science , 287 :1809 , 2000
Abstract :
PubMedSearch : Tettelin_2000_Science_287_1809
PubMedID: 10710307
Gene_locus related to this paper: neigo-pip , neima-metx , neimb-q9k0t9 , neime-ESD , neime-NMA2216 , neime-NMB0276 , neime-NMB0868 , neime-NMB1828 , neime-NMB1877

Title : DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae - Heidelberg_2000_Nature_406_477
Author(s) : Heidelberg JF , Eisen JA , Nelson WC , Clayton RA , Gwinn ML , Dodson RJ , Haft DH , Hickey EK , Peterson JD , Umayam L , Gill SR , Nelson KE , Read TD , Tettelin H , Richardson D , Ermolaeva MD , Vamathevan J , Bass S , Qin H , Dragoi I , Sellers P , McDonald L , Utterback T , Fleishmann RD , Nierman WC , White O , Salzberg SL , Smith HO , Colwell RR , Mekalanos JJ , Venter JC , Fraser CM
Ref : Nature , 406 :477 , 2000
Abstract :
PubMedSearch : Heidelberg_2000_Nature_406_477
PubMedID: 10952301
Gene_locus related to this paper: vibch-rtxAABH , vibch-lipas , vibch-VC0135 , vibch-VC0522 , vibch-VC1418 , vibch-VC1725 , vibch-VC1974 , vibch-VC1986 , vibch-VC2097 , vibch-VC2432 , vibch-VC2610 , vibch-VC2718 , vibch-VCA0063 , vibch-VCA0092 , vibch-VCA0490 , vibch-VCA0688 , vibch-VCA0754 , vibch-VCA0863 , vibch-y1892 , vibch-y2276

Title : Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana - Salanoubat_2000_Nature_408_820
Author(s) : Salanoubat M , Lemcke K , Rieger M , Ansorge W , Unseld M , Fartmann B , Valle G , Blocker H , Perez-Alonso M , Obermaier B , Delseny M , Boutry M , Grivell LA , Mache R , Puigdomenech P , de Simone V , Choisne N , Artiguenave F , Robert C , Brottier P , Wincker P , Cattolico L , Weissenbach J , Saurin W , Quetier F , Schafer M , Muller-Auer S , Gabel C , Fuchs M , Benes V , Wurmbach E , Drzonek H , Erfle H , Jordan N , Bangert S , Wiedelmann R , Kranz H , Voss H , Holland R , Brandt P , Nyakatura G , Vezzi A , D'Angelo M , Pallavicini A , Toppo S , Simionati B , Conrad A , Hornischer K , Kauer G , Lohnert TH , Nordsiek G , Reichelt J , Scharfe M , Schon O , Bargues M , Terol J , Climent J , Navarro P , Collado C , Perez-Perez A , Ottenwalder B , Duchemin D , Cooke R , Laudie M , Berger-Llauro C , Purnelle B , Masuy D , de Haan M , Maarse AC , Alcaraz JP , Cottet A , Casacuberta E , Monfort A , Argiriou A , Flores M , Liguori R , Vitale D , Mannhaupt G , Haase D , Schoof H , Rudd S , Zaccaria P , Mewes HW , Mayer KF , Kaul S , Town CD , Koo HL , Tallon LJ , Jenkins J , Rooney T , Rizzo M , Walts A , Utterback T , Fujii CY , Shea TP , Creasy TH , Haas B , Maiti R , Wu D , Peterson J , Van Aken S , Pai G , Militscher J , Sellers P , Gill JE , Feldblyum TV , Preuss D , Lin X , Nierman WC , Salzberg SL , White O , Venter JC , Fraser CM , Kaneko T , Nakamura Y , Sato S , Kato T , Asamizu E , Sasamoto S , Kimura T , Idesawa K , Kawashima K , Kishida Y , Kiyokawa C , Kohara M , Matsumoto M , Matsuno A , Muraki A , Nakayama S , Nakazaki N , Shinpo S , Takeuchi C , Wada T , Watanabe A , Yamada M , Yasuda M , Tabata S
Ref : Nature , 408 :820 , 2000
Abstract :
PubMedSearch : Salanoubat_2000_Nature_408_820
PubMedID: 11130713
Gene_locus related to this paper: arath-MES17 , arath-AT3G12150 , arath-At3g61680 , arath-AT3g62590 , arath-CXE12 , arath-eds1 , arath-SCP25 , arath-F1P2.110 , arath-F1P2.140 , arath-F11F8.28 , arath-F14D17.80 , arath-F16B3.4 , arath-SCP27 , arath-At3g50790 , arath-At3g05600 , arath-PAD4 , arath-At3g51000 , arath-SCP16 , arath-gid1 , arath-GID1B , arath-Q9LUG8 , arath-Q84JS1 , arath-Q9SFF6 , arath-q9m236 , arath-q9sr22 , arath-q9sr23 , arath-SCP7 , arath-SCP14 , arath-SCP15 , arath-SCP17 , arath-SCP36 , arath-SCP37 , arath-SCP39 , arath-SCP40 , arath-SCP49 , arath-T19F11.2

Title : Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana - Theologis_2000_Nature_408_816
Author(s) : Theologis A , Ecker JR , Palm CJ , Federspiel NA , Kaul S , White O , Alonso J , Altafi H , Araujo R , Bowman CL , Brooks SY , Buehler E , Chan A , Chao Q , Chen H , Cheuk RF , Chin CW , Chung MK , Conn L , Conway AB , Conway AR , Creasy TH , Dewar K , Dunn P , Etgu P , Feldblyum TV , Feng J , Fong B , Fujii CY , Gill JE , Goldsmith AD , Haas B , Hansen NF , Hughes B , Huizar L , Hunter JL , Jenkins J , Johnson-Hopson C , Khan S , Khaykin E , Kim CJ , Koo HL , Kremenetskaia I , Kurtz DB , Kwan A , Lam B , Langin-Hooper S , Lee A , Lee JM , Lenz CA , Li JH , Li Y , Lin X , Liu SX , Liu ZA , Luros JS , Maiti R , Marziali A , Militscher J , Miranda M , Nguyen M , Nierman WC , Osborne BI , Pai G , Peterson J , Pham PK , Rizzo M , Rooney T , Rowley D , Sakano H , Salzberg SL , Schwartz JR , Shinn P , Southwick AM , Sun H , Tallon LJ , Tambunga G , Toriumi MJ , Town CD , Utterback T , Van Aken S , Vaysberg M , Vysotskaia VS , Walker M , Wu D , Yu G , Fraser CM , Venter JC , Davis RW
Ref : Nature , 408 :816 , 2000
Abstract :
PubMedSearch : Theologis_2000_Nature_408_816
PubMedID: 11130712
Gene_locus related to this paper: arath-At1g05790 , arath-At1g09280 , arath-At1g09980 , arath-AT1G29120 , arath-AT1G52695 , arath-AT1G66900 , arath-At1g73750 , arath-AT1G73920 , arath-AT1G74640 , arath-AT1G76140 , arath-AT1G78210 , arath-clh1 , arath-F1O17.3 , arath-F1O17.4 , arath-F1O17.5 , arath-F5I6.3 , arath-At1g52700 , arath-F6D8.27 , arath-F6D8.32 , arath-F9L1.44 , arath-F9P14.11 , arath-F12A4.4 , arath-MES11 , arath-F14G24.2 , arath-F14G24.3 , arath-F14I3.4 , arath-F14O10.2 , arath-F16N3.25 , arath-LCAT2 , arath-At1g34340 , arath-MES15 , arath-CXE6 , arath-ICML1 , arath-At1g72620 , arath-LCAT1 , arath-PLA12 , arath-PLA15 , arath-PLA17 , arath-Q8L7S1 , arath-At1g15070 , arath-SCP2 , arath-SCP4 , arath-SCP5 , arath-SCP18 , arath-SCP32 , arath-SCP44 , arath-SCP45 , arath-SCPL6 , arath-F4IE65 , arath-At1g30370 , arath-T6L1.8 , arath-T6L1.20 , arath-T14P4.6 , arath-MES14 , arath-SCP3 , arath-AXR4 , arath-At1g10040 , arath-ZW18 , arath-pae2 , arath-pae1 , arath-a0a1p8awg3

Title : Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima - Nelson_1999_Nature_399_323
Author(s) : Nelson KE , Clayton RA , Gill SR , Gwinn ML , Dodson RJ , Haft DH , Hickey EK , Peterson JD , Nelson WC , Ketchum KA , McDonald L , Utterback TR , Malek JA , Linher KD , Garrett MM , Stewart AM , Cotton MD , Pratt MS , Phillips CA , Richardson D , Heidelberg J , Sutton GG , Fleischmann RD , Eisen JA , White O , Salzberg SL , Smith HO , Venter JC , Fraser CM
Ref : Nature , 399 :323 , 1999
Abstract :
PubMedSearch : Nelson_1999_Nature_399_323
PubMedID: 10360571
Gene_locus related to this paper: thema-ESTA , thema-q9x0d6 , thema-q9x042 , thema-TM0033 , thema-TM0053 , thema-TM0077 , thema-TM0336 , thema-TM1160 , thema-TM1350

Title : Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1 - White_1999_Science_286_1571
Author(s) : White O , Eisen JA , Heidelberg JF , Hickey EK , Peterson JD , Dodson RJ , Haft DH , Gwinn ML , Nelson WC , Richardson DL , Moffat KS , Qin H , Jiang L , Pamphile W , Crosby M , Shen M , Vamathevan JJ , Lam P , McDonald L , Utterback T , Zalewski C , Makarova KS , Aravind L , Daly MJ , Minton KW , Fleischmann RD , Ketchum KA , Nelson KE , Salzberg S , Smith HO , Venter JC , Fraser CM
Ref : Science , 286 :1571 , 1999
Abstract :
PubMedSearch : White_1999_Science_286_1571
PubMedID: 10567266
Gene_locus related to this paper: deira-aryla , deira-DR0165 , deira-DR0334 , deira-DR0553 , deira-DR0593 , deira-DR0654 , deira-DR0657 , deira-DR0779 , deira-DR0791 , deira-DR0945 , deira-DR0964 , deira-DR1053 , deira-DR1326 , deira-DR1351 , deira-DR1352 , deira-DR1403 , deira-DR1537 , deira-DR1915 , deira-DR1931 , deira-DR2078 , deira-DR2248 , deira-DR2478 , deira-DR2503 , deira-DR2506 , deira-DR2522 , deira-DR2549 , deira-DR2551 , deira-DRA0060 , deira-DRA0150 , deira-DRA0307 , deira-DRA0340 , deira-DRB0023 , deira-DRB0097 , deira-este1 , deira-este2 , deira-lip1 , deira-lip2 , deira-lipest , deira-metx

Title : Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana - Lin_1999_Nature_402_761
Author(s) : Lin X , Kaul S , Rounsley S , Shea TP , Benito MI , Town CD , Fujii CY , Mason T , Bowman CL , Barnstead M , Feldblyum TV , Buell CR , Ketchum KA , Lee J , Ronning CM , Koo HL , Moffat KS , Cronin LA , Shen M , Pai G , Van Aken S , Umayam L , Tallon LJ , Gill JE , Adams MD , Carrera AJ , Creasy TH , Goodman HM , Somerville CR , Copenhaver GP , Preuss D , Nierman WC , White O , Eisen JA , Salzberg SL , Fraser CM , Venter JC
Ref : Nature , 402 :761 , 1999
Abstract :
PubMedSearch : Lin_1999_Nature_402_761
PubMedID: 10617197
Gene_locus related to this paper: arath-At2g45610 , arath-AT2G03550 , arath-AT2G05260 , arath-AT2G12480 , arath-At2g15230 , arath-At2g18360 , arath-At2g19550 , arath-At2g19620 , arath-At2g24280 , arath-AT2G24320 , arath-At2g26740 , arath-At2g26750 , arath-SCP51 , arath-AT2G36290 , arath-At2g42450 , arath-AT2G42690 , arath-AT2G44970 , arath-At2g47630 , arath-AT3g62590 , arath-CGEP , arath-F12L6.6 , arath-F12L6.7 , arath-F12L6.8 , arath-At3g50790 , arath-MES6 , arath-MES7 , arath-MES4 , arath-MES8 , arath-MES2 , arath-MES3 , arath-MES1 , arath-o80731 , arath-pip , arath-PLA11 , arath-PLA13 , arath-PLA16 , arath-PLA19 , arath-q84w08 , arath-SCP8 , arath-SCP9 , arath-SCP10 , arath-SCP11 , arath-SCP12 , arath-SCP13 , arath-SCP23 , arath-SCP26 , arath-SCP28 , arath-SCP46 , arath-T26B15.8 , arath-SCP22 , arath-SFGH , arath-MES19

Title : Complete Genome Sequence of Treponema pallidum, the Syphilis Spirochete - Fraser_1998_Science_281_375
Author(s) : Fraser CM , Norris SJ , Weinstock GM , White O , Sutton GG , Dodson R , Gwinn M , Hickey EK , Clayton R , Ketchum KA , Sodergren E , Hardham JM , McLeod MP , Salzberg S , Peterson J , Khalak H , Richardson D , Howell JK , Chidambaram M , Utterback T , McDonald L , Artiach P , Bowman C , Cotton MD , Fujii C , Garland S , Hatch B , Horst K , Roberts K , Sandusky M , Weidman J , Smith HO , Venter JC
Ref : Science , 281 :375 , 1998
Abstract :
PubMedSearch : Fraser_1998_Science_281_375
PubMedID: 9665876
Gene_locus related to this paper: trepa-naptd , trepa-TP0902 , trepa-TP0952

Title : Chromosome 2 sequence of the human malaria parasite Plasmodium falciparum - Gardner_1998_Science_282_1126
Author(s) : Gardner MJ , Tettelin H , Carucci DJ , Cummings LM , Aravind L , Koonin EV , Shallom S , Mason T , Yu K , Fujii C , Pederson J , Shen K , Jing J , Aston C , Lai Z , Schwartz DC , Pertea M , Salzberg S , Zhou L , Sutton GG , Clayton R , White O , Smith HO , Fraser CM , Hoffman SL
Ref : Science , 282 :1126 , 1998
Abstract :
PubMedSearch : Gardner_1998_Science_282_1126
PubMedID: 9804551

Title : The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus - Klenk_1997_Nature_390_364
Author(s) : Klenk HP , Clayton RA , Tomb JF , White O , Nelson KE , Ketchum KA , Dodson RJ , Gwinn M , Hickey EK , Peterson JD , Richardson DL , Kerlavage AR , Graham DE , Kyrpides NC , Fleischmann RD , Quackenbush J , Lee NH , Sutton GG , Gill S , Kirkness EF , Dougherty BA , McKenney K , Adams MD , Loftus B , Peterson S , Reich CI , McNeil LK , Badger JH , Glodek A , Zhou L , Overbeek R , Gocayne JD , Weidman JF , McDonald L , Utterback T , Cotton MD , Spriggs T , Artiach P , Kaine BP , Sykes SM , Sadow PW , D'Andrea KP , Bowman C , Fujii C , Garland SA , Mason TM , Olsen GJ , Fraser CM , Smith HO , Woese CR , Venter JC
Ref : Nature , 390 :364 , 1997
Abstract :
PubMedSearch : Klenk_1997_Nature_390_364
PubMedID: 9389475
Gene_locus related to this paper: arcfu-AF0514 , arcfu-AF0675 , arcfu-AF1134 , arcfu-AF1563 , arcfu-AF1753 , arcfu-AF1763 , arcfu-est1 , arcfu-est2 , arcfu-est3 , arcfu-estea , arcfu-o28594 , arcfu-o29442 , arcfu-pcbd

Title : Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi - Fraser_1997_Nature_390_580
Author(s) : Fraser CM , Casjens S , Huang WM , Sutton GG , Clayton R , Lathigra R , White O , Ketchum KA , Dodson R , Hickey EK , Gwinn M , Dougherty B , Tomb JF , Fleischmann RD , Richardson D , Peterson J , Kerlavage AR , Quackenbush J , Salzberg S , Hanson M , van Vugt R , Palmer N , Adams MD , Gocayne J , Weidman J , Utterback T , Watthey L , McDonald L , Artiach P , Bowman C , Garland S , Fujii C , Cotton MD , Horst K , Roberts K , Hatch B , Smith HO , Venter JC
Ref : Nature , 390 :580 , 1997
Abstract :
PubMedSearch : Fraser_1997_Nature_390_580
PubMedID: 9403685
Gene_locus related to this paper: borbu-BB0646

Title : The complete genome sequence of the gastric pathogen Helicobacter pylori. - Tomb_1997_Nature_388_539
Author(s) : Tomb J-F , White O , Kerlavage AR , Clayton RA , Sutton GG , Fleischmann RD , Ketchum KA , Klenk H-P , Gill S , Dougherty BA , Nelson K , Quackenbush J , Zhou L , Kirkness EF , Peterson S , Loftus B , Richardson D , Dodson R , Khalak HG , Glodek A , McKenney K , FitzGerald LM , Lee N , Adams MD , Hickey EK , Berg DE , Gocayne JD , Utterback TR , Peterson JD , Kelley JM , Cotton MD , Weidman JM , Fujii C , Bowman C , Watthey L , Wallin E , Hayes WS , Borodovsky M , Karp PD , Smith HO , Fraser CM , Venter JC
Ref : Nature , 388 :539 , 1997
Abstract :
PubMedSearch : Tomb_1997_Nature_388_539
PubMedID: 9252185
Gene_locus related to this paper: helpy-HP0739 , helpy-o25061

Title : Whole-genome random sequencing and assembly of Haemophilus influenzae Rd - Fleischmann_1995_Science_269_496
Author(s) : Fleischmann RD , Adams MD , White O , Clayton RA , Kirkness EF , Kerlavage AR , Bult CJ , Tomb JF , Dougherty BA , Merrick JM , McKenney K , Sutton G , FitzHugh W , Fields C , Gocayne JD , Scott J , Shirley R , Liu LI , Glodek A , Kelley JM , Weidman JF , Phillips CA , Spriggs T , Hedblom E , Cotton MD , Utterback TR , Hanna MC , Nguyen DT , Saudek DM , Brandon RC , FineLD , Fritchman JL , Fuhrmann JL , Geoghagen NS , Gnehm CL , McDonald LA , Keith V , Small KV , Fraser CM , Smith HO , Venter JC
Ref : Science , 269 :496 , 1995
Abstract :
PubMedSearch : Fleischmann_1995_Science_269_496
PubMedID: 7542800
Gene_locus related to this paper: haein-HI0193 , haein-metx , haein-pldb , haein-sfgh , haein-y1552 , haein-yfbb

Title : The minimal gene complement of Mycoplasma genitalium - Fraser_1995_Science_270_397
Author(s) : Fraser CM , Gocayne JD , White O , Adams MD , Clayton RA , Fleischmann RD , Bult CJ , Kerlavage AR , Sutton G , Kelley JM , Fritchman RD , Weidman JF , Small KV , Sandusky M , Fuhrmann J , Nguyen D , Utterback TR , Saudek DM , Phillips CA , Merrick JM , Tomb JF , Dougherty BA , Bott KF , Hu PC , Lucier TS , Peterson SN , Smith HO , Hutchison CA, 3rd , Venter JC
Ref : Science , 270 :397 , 1995
Abstract :
PubMedSearch : Fraser_1995_Science_270_397
PubMedID: 7569993
Gene_locus related to this paper: mycge-esl1 , mycge-esl2 , mycge-esl3 , mycge-pip