Gene_Locus Report

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Gene_locus Report for: cupnh-q0jyv4

Ralstonia eutropha (Cupriavidus necator); Ralstonia sp. Transcriptional regulator AraC familydecarboxylase (EC 4.1.1.44)

Comment
Other strains: Ralstonia eutropha (Cupriavidus necator) (strains ATCC 17699 / H16 / DSM 428 / Stanier 337; N-1); Ralstonia sp. (GA3-3; SK-4)


Relationship
Family|Carboxymethylbutenolide_lactonase
Block| X
Position in NCBI Life Tree|Ralstonia eutropha
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > Burkholderiaceae: N E > Cupriavidus: N E > Cupriavidus necator: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AM260480, CP002878, AQPZ01000018
3 UniProt : Q0JYV4, F8GTF9, R7XKX8
3 UniProt : Q0JYV4, F8GTF9, R7XKX8
3 Interpro : Q0JYV4, F8GTF9, R7XKX8
3 Pfam : Q0JYV4, F8GTF9, R7XKX8
3 PIRSF : Q0JYV4, F8GTF9, R7XKX8
3 SUPERFAM : Q0JYV4, F8GTF9, R7XKX8
Sequence
Graphical view for this peptide sequence: cupnh-q0jyv4
Colored MSA for Carboxymethylbutenolide_lactonase (raw)
MPYLDHAGARLFYTVDGPESAPAILFSNSLGTDHTMWEPQAAALAGRYRV
VRYDTRGHGRSTAPGDAFTVAQLGQDVIAILDALGIGQAVFCGLSMGGLT
GMWLGIHAPQRFSHIVLANTAAKIGNADGWNTRIETVRREGMAVMVAPSV
ERWFTPEFAATAERALDGLRDVLAGLAPRGYAASCAAVRDADFRESVASI
QVPVLVIAGSQDPSTPAQEGRALADAIPGARFVELPAAHISSFEQPGRFT
AALLDFV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPYLDHAGARLFYTVDGPESAPAILFSNSLGTDHTMWEPQAAALAGRYRV
VRYDTRGHGRSTAPGDAFTVAQLGQDVIAILDALGIGQAVFCGLSMGGLT
GMWLGIHAPQRFSHIVLANTAAKIGNADGWNTRIETVRREGMAVMVAPSV
ERWFTPEFAATAERALDGLRDVLAGLAPRGYAASCAAVRDADFRESVASI
QVPVLVIAGSQDPSTPAQEGRALADAIPGARFVELPAAHISSFEQPGRFT
AALLDFV


References
    Title: Draft Genome Sequence of Ralstonia sp. Strain GA3-3, Isolated from Australian Suburban Soil
    Pearce SL, Pushiri H, Oakeshott JG, Russell RJ, Pandey G
    Ref: Genome Announc, 1:, 2013 : PubMed

            

    Title: Genome sequence of the bioplastic-producing Knallgas bacterium Ralstonia eutropha H16
    Pohlmann A, Fricke WF, Reinecke F, Kusian B, Liesegang H, Cramm R, Eitinger T, Ewering C, Potter M and Bowien B <6 more author(s)>
    Ref: Nat Biotechnol, 24:1257, 2006 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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