Gene_Locus Report

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Gene_locus Report for: enthi-q50rh1

Entamoeba histolytica HM-1:IMSS hypothetical protein

Comment
Other strains: Entamoeba histolytica HM-3:IMSS HM-1:IMSS-A


Relationship
Family|Duf_676
Block| X
Position in NCBI Life Tree|Entamoeba histolytica HM-1:IMSS
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Amoebozoa: N E > Archamoebae: N E > Entamoebidae: N E > Entamoeba: N E > Entamoeba histolytica: N E > Entamoeba histolytica HM-1:IMSS: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : XP_649584
>3 UniProt links 1 more: A0A5K1UWI3, C4M9E7, M7W0L9
>3 Interpro links 1 more: A0A5K1UWI3, C4M9E7, M7W0L9
>3 Pfam links 1 more: A0A5K1UWI3, C4M9E7, M7W0L9
>3 PIRSF links 1 more: A0A5K1UWI3, C4M9E7, M7W0L9
>3 SUPERFAM links 1 more: A0A5K1UWI3, C4M9E7, M7W0L9
Sequence
Graphical view for this peptide sequence: enthi-q50rh1
Colored MSA for Duf_676 (raw)
MSDNETIPKDTNIEQKKPTIDYFFFVHGLLSLSINPKEHWAPFANALKNE
LQTNYIMRYCSCNSERVKTLDGIEVGGLRIANEICGCLKSNQQKRGDEKY
RIHFIGHSLGGLYLRFAIPILFKRGIFNNLNWIPFSFMTLETPHLGVQKP
LNNGSFDSMYRVISDVVFEGLTMNELQLQDKPFPPYDPTCLKEYPLLLRM
VENDVIAPLNKFKHLTLIQNIRFSFQVPYVSASIDRAIPYDREFLKDQFL
LDGFDFPSQYNDIMSGCNKHYQLQDERGEVFEERIDGCVVYDRIVKQLNT
LKWRRLNVHFRTKSSDAHMFIMGQMNRKRIFKNWGNDDVTSYLDTLCKLI
KRDIDIENGDIEILSLQQDGSDSQEIVQNSNSSTEEKLIDIQNPETLPLK
DEKEETSHPQIL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSDNETIPKDTNIEQKKPTIDYFFFVHGLLSLSINPKEHWAPFANALKNE
LQTNYIMRYCSCNSERVKTLDGIEVGGLRIANEICGCLKSNQQKRGDEKY
RIHFIGHSLGGLYLRFAIPILFKRGIFNNLNWIPFSFMTLETPHLGVQKP
LNNGSFDSMYRVISDVVFEGLTMNELQLQDKPFPPYDPTCLKEYPLLLRM
VENDVIAPLNKFKHLTLIQNIRFSFQVPYVSASIDRAIPYDREFLKDQFL
LDGFDFPSQYNDIMSGCNKHYQLQDERGEVFEERIDGCVVYDRIVKQLNT
LKWRRLNVHFRTKSSDAHMFIMGQMNRKRIFKNWGNDDVTSYLDTLCKLI
KRDIDIENGDIEILSLQQDGSDSQEIVQNSNSSTEEKLIDIQNPETLPLK
DEKEETSHPQIL


Reference
    Title: The genome of the protist parasite Entamoeba histolytica
    Loftus B, Anderson I, Davies R, Alsmark UC, Samuelson J, Amedeo P, Roncaglia P, Berriman M, Hirt RP and Hall N <44 more author(s)>
    Ref: Nature, 433:865, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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