| Title : Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4(T)) - Anderson_2012_Stand.Genomic.Sci_6_174 |
| Author(s) : Anderson I , Held B , Lapidus A , Nolan M , Lucas S , Tice H , Del Rio TG , Cheng JF , Han C , Tapia R , Goodwin LA , Pitluck S , Liolios K , Mavromatis K , Pagani I , Ivanova N , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Brambilla EM , Rohde M , Spring S , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 6 :174 , 2012 |
| Abstract : |
| PubMedSearch : Anderson_2012_Stand.Genomic.Sci_6_174 |
| PubMedID: 22768361 |
| Gene_locus related to this paper: 9bact-h1nzy5 |
| Title : Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8(T)) - Anderson_2012_Stand.Genomic.Sci_7_210 |
| Author(s) : Anderson I , Munk C , Lapidus A , Nolan M , Lucas S , Tice H , Del Rio TG , Cheng JF , Han C , Tapia R , Goodwin L , Pitluck S , Liolios K , Mavromatis K , Pagani I , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Rohde M , Tindall BJ , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Ivanova N |
| Ref : Stand Genomic Sci , 7 :210 , 2012 |
| Abstract : |
| PubMedSearch : Anderson_2012_Stand.Genomic.Sci_7_210 |
| PubMedID: 23408178 |
| Title : Complete genome sequence of Halopiger xanaduensis type strain (SH-6(T)) - Anderson_2012_Stand.Genomic.Sci_6_31 |
| Author(s) : Anderson I , Tindall BJ , Rohde M , Lucas S , Han J , Lapidus A , Cheng JF , Goodwin L , Pitluck S , Peters L , Pati A , Mikhailova N , Pagani I , Teshima H , Han C , Tapia R , Land M , Woyke T , Klenk HP , Kyrpides N , Ivanova N |
| Ref : Stand Genomic Sci , 6 :31 , 2012 |
| Abstract : |
| PubMedSearch : Anderson_2012_Stand.Genomic.Sci_6_31 |
| PubMedID: 22675596 |
| Gene_locus related to this paper: halxs-f8dda6 |
| Title : Complete genome sequence of Thermocrinis albus type strain (HI 11\/12) - Wirth_2010_Stand.Genomic.Sci_2_194 |
| Author(s) : Wirth R , Sikorski J , Brambilla E , Misra M , Lapidus A , Copeland A , Nolan M , Lucas S , Chen F , Tice H , Cheng JF , Han C , Detter JC , Tapia R , Bruce D , Goodwin L , Pitluck S , Pati A , Anderson I , Ivanova N , Mavromatis K , Mikhailova N , Chen A , Palaniappan K , Bilek Y , Hader T , Land M , Hauser L , Chang YJ , Jeffries CD , Tindall BJ , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 2 :194 , 2010 |
| Abstract : |
| PubMedSearch : Wirth_2010_Stand.Genomic.Sci_2_194 |
| PubMedID: 21304702 |
| Gene_locus related to this paper: theah-d3smz6 |
| Title : Complete genome sequence of Methanothermus fervidus type strain (V24S) - Anderson_2010_Stand.Genomic.Sci_3_315 |
| Author(s) : Anderson I , Djao OD , Misra M , Chertkov O , Nolan M , Lucas S , Lapidus A , Del Rio TG , Tice H , Cheng JF , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Brambilla E , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Sikorski J , Spring S , Rohde M , Eichinger K , Huber H , Wirth R , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 3 :315 , 2010 |
| Abstract : |
| PubMedSearch : Anderson_2010_Stand.Genomic.Sci_3_315 |
| PubMedID: 21304736 |
| Title : Complete genome sequence of Halogeometricum borinquense type strain (PR3) - Malfatti_2009_Stand.Genomic.Sci_1_150 |
| Author(s) : Malfatti S , Tindall BJ , Schneider S , Fahnrich R , Lapidus A , Labuttii K , Copeland A , Glavina Del Rio T , Nolan M , Chen F , Lucas S , Tice H , Cheng JF , Bruce D , Goodwin L , Pitluck S , Anderson I , Pati A , Ivanova N , Mavromatis K , Chen A , Palaniappan K , D'Haeseleer P , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Chain P |
| Ref : Stand Genomic Sci , 1 :150 , 2009 |
| Abstract : |
| PubMedSearch : Malfatti_2009_Stand.Genomic.Sci_1_150 |
| PubMedID: 21304651 |
| Gene_locus related to this paper: 9eury-c1v4h6 , 9eury-c1v4p7 , 9eury-c1v4w8 , 9eury-c1v5h9 , 9eury-c1v5q3 , 9eury-c1v5t3 , 9eury-c1v7y6 , 9eury-c1v8n9 , 9eury-c1v568 , 9eury-c1vb62 , 9eury-c1vc42 , 9eury-c1vcz1 , 9eury-c1vd75 , 9eury-c1vdd8 , 9eury-c1ve13 , 9eury-c1ve51 , 9eury-c1vei1 , 9eury-c1vet7 , halbp-e4nkx5 , halbp-e4nra7 , halbp-e4nub0 , halbp-e4nmr3 |
| Title : Genome analysis of the anaerobic thermohalophilic bacterium Halothermothrix orenii - Mavromatis_2009_PLoS.One_4_e4192 |
| Author(s) : Mavromatis K , Ivanova N , Anderson I , Lykidis A , Hooper SD , Sun H , Kunin V , Lapidus A , Hugenholtz P , Patel B , Kyrpides NC |
| Ref : PLoS ONE , 4 :e4192 , 2009 |
| Abstract : |
| PubMedSearch : Mavromatis_2009_PLoS.One_4_e4192 |
| PubMedID: 19145256 |
| Gene_locus related to this paper: haloh-b8cwa6 , haloh-b8czv0 |
| Title : The genomic basis of trophic strategy in marine bacteria - Lauro_2009_Proc.Natl.Acad.Sci.U.S.A_106_15527 |
| Author(s) : Lauro FM , McDougald D , Thomas T , Williams TJ , Egan S , Rice S , DeMaere MZ , Ting L , Ertan H , Johnson J , Ferriera S , Lapidus A , Anderson I , Kyrpides N , Munk AC , Detter C , Han CS , Brown MV , Robb FT , Kjelleberg S , Cavicchioli R |
| Ref : Proc Natl Acad Sci U S A , 106 :15527 , 2009 |
| Abstract : |
| PubMedSearch : Lauro_2009_Proc.Natl.Acad.Sci.U.S.A_106_15527 |
| PubMedID: 19805210 |
| Gene_locus related to this paper: phoas-q1zm99 , phoas-q1zpt1 , phoas-q1zwh7 , phoas-q1zx01 , phoas-q1zlj9 , sphal-q1grs6 |
| Title : Complete genome sequence of Halorhabdus utahensis type strain (AX-2) - Anderson_2009_Stand.Genomic.Sci_1_218 |
| Author(s) : Anderson I , Tindall BJ , Pomrenke H , Goker M , Lapidus A , Nolan M , Copeland A , Glavina Del Rio T , Chen F , Tice H , Cheng JF , Lucas S , Chertkov O , Bruce D , Brettin T , Detter JC , Han C , Goodwin L , Land M , Hauser L , Chang YJ , Jeffries CD , Pitluck S , Pati A , Mavromatis K , Ivanova N , Ovchinnikova G , Chen A , Palaniappan K , Chain P , Rohde M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 1 :218 , 2009 |
| Abstract : |
| PubMedSearch : Anderson_2009_Stand.Genomic.Sci_1_218 |
| PubMedID: 21304660 |
| Gene_locus related to this paper: halud-c7npq6 , halud-c7npw0 , halud-c7nsl4 , halud-c7nut6 , halud-c7npw2 |
| Title : A korarchaeal genome reveals insights into the evolution of the Archaea - Elkins_2008_Proc.Natl.Acad.Sci.U.S.A_105_8102 |
| Author(s) : Elkins JG , Podar M , Graham DE , Makarova KS , Wolf Y , Randau L , Hedlund BP , Brochier-Armanet C , Kunin V , Anderson I , Lapidus A , Goltsman E , Barry K , Koonin EV , Hugenholtz P , Kyrpides N , Wanner G , Richardson P , Keller M , Stetter KO |
| Ref : Proc Natl Acad Sci U S A , 105 :8102 , 2008 |
| Abstract : |
| PubMedSearch : Elkins_2008_Proc.Natl.Acad.Sci.U.S.A_105_8102 |
| PubMedID: 18535141 |
| Title : Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction - Anderson_2008_J.Bacteriol_190_2957 |
| Author(s) : Anderson I , Rodriguez J , Susanti D , Porat I , Reich C , Ulrich LE , Elkins JG , Mavromatis K , Lykidis A , Kim E , Thompson LS , Nolan M , Land M , Copeland A , Lapidus A , Lucas S , Detter C , Zhulin IB , Olsen GJ , Whitman W , Mukhopadhyay B , Bristow J , Kyrpides N |
| Ref : Journal of Bacteriology , 190 :2957 , 2008 |
| Abstract : |
| PubMedSearch : Anderson_2008_J.Bacteriol_190_2957 |
| PubMedID: 18263724 |
| Gene_locus related to this paper: thepd-a1s004 |
| Title : Genome sequence and analysis of the soil cellulolytic actinomycete Thermobifida fusca YX - Lykidis_2007_J.Bacteriol_189_2477 |
| Author(s) : Lykidis A , Mavromatis K , Ivanova N , Anderson I , Land M , DiBartolo G , Martinez M , Lapidus A , Lucas S , Copeland A , Richardson P , Wilson DB , Kyrpides N |
| Ref : Journal of Bacteriology , 189 :2477 , 2007 |
| Abstract : |
| PubMedSearch : Lykidis_2007_J.Bacteriol_189_2477 |
| PubMedID: 17209016 |
| Gene_locus related to this paper: thefu-q6a0i3 , thefy-q47l17 , thefy-q47p38 , thefy-q47pm5 |
| Title : The Methanosarcina barkeri genome: comparative analysis with Methanosarcina acetivorans and Methanosarcina mazei reveals extensive rearrangement within methanosarcinal genomes - Maeder_2006_J.Bacteriol_188_7922 |
| Author(s) : Maeder DL , Anderson I , Brettin TS , Bruce DC , Gilna P , Han CS , Lapidus A , Metcalf WW , Saunders E , Tapia R , Sowers KR |
| Ref : Journal of Bacteriology , 188 :7922 , 2006 |
| Abstract : |
| PubMedSearch : Maeder_2006_J.Bacteriol_188_7922 |
| PubMedID: 16980466 |
| Gene_locus related to this paper: metbf-q46ca9 , metbf-q469u5 |
| Title : Draft sequencing and comparative genomics of Xylella fastidiosa strains reveal novel biological insights - Bhattacharyya_2002_Genome.Res_12_1556 |
| Author(s) : Bhattacharyya A , Stilwagen S , Reznik G , Feil H , Feil WS , Anderson I , Bernal A , D'Souza M , Ivanova N , Kapatral V , Larsen N , Los T , Lykidis A , Selkov E, Jr. , Walunas TL , Purcell A , Edwards RA , Hawkins T , Haselkorn R , Overbeek R , Kyrpides NC , Predki PF |
| Ref : Genome Res , 12 :1556 , 2002 |
| Abstract : |
| PubMedSearch : Bhattacharyya_2002_Genome.Res_12_1556 |
| PubMedID: 12368248 |
| Title : Whole-genome comparative analysis of three phytopathogenic Xylella fastidiosa strains - Bhattacharyya_2002_Proc.Natl.Acad.Sci.U.S.A_99_12403 |
| Author(s) : Bhattacharyya A , Stilwagen S , Ivanova N , D'Souza M , Bernal A , Lykidis A , Kapatral V , Anderson I , Larsen N , Los T , Reznik G , Selkov E, Jr. , Walunas TL , Feil H , Feil WS , Purcell A , Lassez JL , Hawkins TL , Haselkorn R , Overbeek R , Predki PF , Kyrpides NC |
| Ref : Proceedings of the National Academy of Sciences of the United States of America , 99 :12403 , 2002 |
| Abstract : |
| PubMedSearch : Bhattacharyya_2002_Proc.Natl.Acad.Sci.U.S.A_99_12403 |
| PubMedID: 12205291 |
| Title : The genome sequence of the facultative intracellular pathogen Brucella melitensis - DelVecchio_2002_Proc.Natl.Acad.Sci.U.S.A_99_443 |
| Author(s) : DelVecchio VG , Kapatral V , Redkar RJ , Patra G , Mujer C , Los T , Ivanova N , Anderson I , Bhattacharyya A , Lykidis A , Reznik G , Jablonski L , Larsen N , D'Souza M , Bernal A , Mazur M , Goltsman E , Selkov E , Elzer PH , Hagius S , O'Callaghan D , Letesson JJ , Haselkorn R , Kyrpides N , Overbeek R |
| Ref : Proc Natl Acad Sci U S A , 99 :443 , 2002 |
| Abstract : |
| PubMedSearch : DelVecchio_2002_Proc.Natl.Acad.Sci.U.S.A_99_443 |
| PubMedID: 11756688 |
| Gene_locus related to this paper: brume-BMEI0552 , brume-BMEI0733 , brume-BMEI1044 , brume-BMEI1119 , brume-BMEI1365 , brume-BMEI1594 , brume-BMEI1608 , brume-BMEI1822 , brume-BMEI1884 , brume-BMEI1951 , brume-BMEI2011 , brume-BMEII0047 , brume-BMEII0306 , brume-BMEII0681 , brume-BMEII0989 , brume-dhE2 , brume-PCAD , brusu-BR0288 , brusu-BR1291 , brusu-BR1327 |
| Title : Genome sequence and analysis of the oral bacterium Fusobacterium nucleatum strain ATCC 25586 - Kapatral_2002_J.Bacteriol_184_2005 |
| Author(s) : Kapatral V , Anderson I , Ivanova N , Reznik G , Los T , Lykidis A , Bhattacharyya A , Bartman A , Gardner W , Grechkin G , Zhu L , Vasieva O , Chu L , Kogan Y , Chaga O , Goltsman E , Bernal A , Larsen N , D'Souza M , Walunas T , Pusch G , Haselkorn R , Fonstein M , Kyrpides N , Overbeek R |
| Ref : Journal of Bacteriology , 184 :2005 , 2002 |
| Abstract : |
| PubMedSearch : Kapatral_2002_J.Bacteriol_184_2005 |
| PubMedID: 11889109 |
| Gene_locus related to this paper: fusnn-FN0616 , fusnn-FN0752 , fusnu-FN0280 , fusnu-FN0484 , fusnu-FN0852 , fusnu-FN1062 , fusnu-FN1128 , fusnu-FN1345 , fusnv-q7p2e5 , fusnv-q7p338 |