Gene_Locus Report

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Gene_locus Report for: synsp-Q55130

Synechocystis sp. PCC6803 slr0440 Q55130 BAA10264.1

Relationship
Family|RsbQ-like
Block| X
Position in NCBI Life Tree|Synechocystis sp.
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Cyanobacteria/Melainabacteria group: N E > Cyanobacteria: N E > Synechococcales: N E > Merismopediaceae: N E > Synechocystis: N E > Synechocystis sp.: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : D64001
1 Ncbi-nid : 1001102
1 Ncbi-pid : 1001124
1 UniProt : Q55130
1 Interpro : Q55130
1 Prodom : Q55130
1 Pfam : Q55130
1 PIRSF : Q55130
1 SUPERFAM : Q55130
Sequence
Graphical view for this peptide sequence: synsp-Q55130
Colored MSA for RsbQ-like (raw)
MEKYNIQVLGNVNSQETLVFAHGFGSEQNAWRSIYPAFEENYRIVLFDFP
GSKPANSKDFDIQNYNSLKDYADDLMEIAHLAGVRQGILIAHSASCMIGV
LASLRDPNLFKGMVFICGSPRYRDDGDYKGGFSQEKIATILNEMSHNYAE
WIRTYAPAAVNDPNKPELVEEFSHCLLQLRPDIGLVVFSLIIMSDYRREV
AQVEIPTLIVQPQEDIFVPPTVGAYLYRIMKNSELYWIDTPGHFPHLANP
TEITKAIADYLQENEFV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MEKYNIQVLGNVNSQETLVFAHGFGSEQNAWRSIYPAFEENYRIVLFDFP
GSKPANSKDFDIQNYNSLKDYADDLMEIAHLAGVRQGILIAHSASCMIGV
LASLRDPNLFKGMVFICGSPRYRDDGDYKGGFSQEKIATILNEMSHNYAE
WIRTYAPAAVNDPNKPELVEEFSHCLLQLRPDIGLVVFSLIIMSDYRREV
AQVEIPTLIVQPQEDIFVPPTVGAYLYRIMKNSELYWIDTPGHFPHLANP
TEITKAIADYLQENEFV


References
    Title: Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions
    Kaneko T, Sato S, Kotani H, Tanaka A, Asamizu E, Nakamura Y, Miyajima N, Hirosawa M, Sugiura M and Tabata S <14 more author(s)>
    Ref: DNA Research, 3:109, 1996 : PubMed

            

    Title: Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome
    Kaneko T, Tanaka A, Sato S, Kotani H, Sazuka T, Miyajima N, Sugiura M, Tabata S
    Ref: DNA Research, 2:153, 1995 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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