| Title : Structural dynamics of the Ca(2+)-regulated cutinase towards structure-based improvement of PET degradation activity - Numoto_2024_Int.J.Biol.Macromol_281_136597 |
| Author(s) : Numoto N , Kondo F , Bekker GJ , Liao Z , Yamashita M , Iida A , Ito N , Kamiya N , Oda M |
| Ref : Int J Biol Macromol , 281 :136597 , 2024 |
| Abstract : |
| PubMedSearch : Numoto_2024_Int.J.Biol.Macromol_281_136597 |
| PubMedID: 39419144 |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Improvement of thermostability and activity of PET-degrading enzyme Cut190 towards a detailed understanding and application of the enzymatic reaction mechanism - Numoto_2023_bioRxiv__ |
| Author(s) : Numoto N , Kamiya N , Oda M |
| Ref : Biorxiv , : , 2023 |
| Abstract : |
| PubMedSearch : Numoto_2023_bioRxiv__ |
| PubMedID: |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Cutinases from thermophilic bacteria (actinomycetes): From identification to functional and structural characterization - Oda_2021_Methods.Enzymol_648_159 |
| Author(s) : Oda M , Numoto N , Bekker GJ , Kamiya N , Kawai F |
| Ref : Methods Enzymol , 648 :159 , 2021 |
| Abstract : |
| PubMedSearch : Oda_2021_Methods.Enzymol_648_159 |
| PubMedID: 33579402 |
| Title : Structural basis for Ca(2+)-dependent catalysis of a cutinase-like enzyme and its engineering: application to enzymatic PET depolymerization - Oda_2021_Biophys.Physicobiol_18_168 |
| Author(s) : Oda M |
| Ref : Biophys Physicobiol , 18 :168 , 2021 |
| Abstract : |
| PubMedSearch : Oda_2021_Biophys.Physicobiol_18_168 |
| PubMedID: 34386313 |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Structural basis of mutants of PET-degrading enzyme from Saccharomonospora viridis AHK190 with high activity and thermal stability - Emori_2021_Proteins_89_502 |
| Author(s) : Emori M , Numoto N , Senga A , Bekker GJ , Kamiya N , Kobayashi Y , Ito N , Kawai F , Oda M |
| Ref : Proteins , 89 :502 , 2021 |
| Abstract : |
| PubMedSearch : Emori_2021_Proteins_89_502 |
| PubMedID: 33340163 |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Multiple structural states of Ca2+-regulated PET hydrolase, Cut190, and its correlation with activity and stability - Senga_2021_J.Biochem_169_207 |
| Author(s) : Senga A , Numoto N , Yamashita M , Iida A , Ito N , Kawai F , Oda M |
| Ref : J Biochem , 169 :207 , 2021 |
| Abstract : |
| PubMedSearch : Senga_2021_J.Biochem_169_207 |
| PubMedID: 32882044 |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Current knowledge on enzymatic PET degradation and its possible application to waste stream management and other fields - Kawai_2019_Appl.Microbiol.Biotechnol_103_4253 |
| Author(s) : Kawai F , Kawabata T , Oda M |
| Ref : Applied Microbiology & Biotechnology , 103 :4253 , 2019 |
| Abstract : |
| PubMedSearch : Kawai_2019_Appl.Microbiol.Biotechnol_103_4253 |
| PubMedID: 30957199 |
| Title : Metal binding to cutinase-like enzyme from Saccharomonospora viridis AHK190 and its effects on enzyme activity and stability - Senga_2019_J.Biochem_166_149 |
| Author(s) : Senga A , Hantani Y , Bekker GJ , Kamiya N , Kimura Y , Kawai F , Oda M |
| Ref : J Biochem , 166 :149 , 2019 |
| Abstract : |
| PubMedSearch : Senga_2019_J.Biochem_166_149 |
| PubMedID: 30825308 |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Folding thermodynamics of PET-hydrolyzing enzyme Cut190 depending on Ca2+ concentration - Inaba_2019_J.Therm.Anal.Calorim_135_2655 |
| Author(s) : Inaba S , Kamiya N , Bekker GJ , Kawai F , Oda M |
| Ref : Journal of Thermal Analysis and Calorimetry , 135 :2655 , 2019 |
| Abstract : |
| PubMedSearch : Inaba_2019_J.Therm.Anal.Calorim_135_2655 |
| PubMedID: |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Structural Dynamics of the PET-Degrading Cutinase-like Enzyme from Saccharomonospora viridis AHK190 in Substrate-Bound States Elucidates the Ca(2+)-Driven Catalytic Cycle - Numoto_2018_Biochemistry_57_5289 |
| Author(s) : Numoto N , Kamiya N , Bekker GJ , Yamagami Y , Inaba S , Ishii K , Uchiyama S , Kawai F , Ito N , Oda M |
| Ref : Biochemistry , 57 :5289 , 2018 |
| Abstract : |
| PubMedSearch : Numoto_2018_Biochemistry_57_5289 |
| PubMedID: 30110540 |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Enzymatic hydrolysis of PET: functional roles of three Ca(2+) ions bound to a cutinase-like enzyme, Cut190*, and its engineering for improved activity - Oda_2018_Appl.Microbiol.Biotechnol_102_10067 |
| Author(s) : Oda M , Yamagami Y , Inaba S , Oida T , Yamamoto M , Kitajima S , Kawai F |
| Ref : Applied Microbiology & Biotechnology , 102 :10067 , 2018 |
| Abstract : |
| PubMedSearch : Oda_2018_Appl.Microbiol.Biotechnol_102_10067 |
| PubMedID: 30250976 |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Significance of Cholinergic and Peptidergic Nerves in Stress-Induced Ulcer and MALT Lymphoma Formation - Nakamura_2017_Curr.Pharm.Des_23_3993 |
| Author(s) : Nakamura M , Overby A , Uehara A , Oda M , Takahashi S , Murayama SY , Matsui H |
| Ref : Curr Pharm Des , 23 :3993 , 2017 |
| Abstract : |
| PubMedSearch : Nakamura_2017_Curr.Pharm.Des_23_3993 |
| PubMedID: 28190393 |
| Title : Mutational analysis of cutinase-like enzyme, Cut190, based on the 3D docking structure with model compounds of polyethylene terephthalate - Kawabata_2017_J.Biosci.Bioeng_124_28 |
| Author(s) : Kawabata T , Oda M , Kawai F |
| Ref : J Biosci Bioeng , 124 :28 , 2017 |
| Abstract : |
| PubMedSearch : Kawabata_2017_J.Biosci.Bioeng_124_28 |
| PubMedID: 28259444 |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Structural basis for the Ca(2+)-enhanced thermostability and activity of PET-degrading cutinase-like enzyme from Saccharomonospora viridis AHK190 - Miyakawa_2015_Appl.Microbiol.Biotechnol_99_4297 |
| Author(s) : Miyakawa T , Mizushima H , Ohtsuka J , Oda M , Kawai F , Tanokura M |
| Ref : Applied Microbiology & Biotechnology , 99 :4297 , 2015 |
| Abstract : |
| PubMedSearch : Miyakawa_2015_Appl.Microbiol.Biotechnol_99_4297 |
| PubMedID: 25492421 |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : A novel Ca-activated, thermostabilized polyesterase capable of hydrolyzing polyethylene terephthalate from Saccharomonospora viridis AHK190 - Kawai_2014_Appl.Microbiol.Biotechnol_98_10053 |
| Author(s) : Kawai F , Oda M , Tamashiro T , Waku T , Tanaka N , Yamamoto M , Mizushima H , Miyakawa T , Tanokura M |
| Ref : Applied Microbiology & Biotechnology , 98 :10053 , 2014 |
| Abstract : |
| PubMedSearch : Kawai_2014_Appl.Microbiol.Biotechnol_98_10053 |
| PubMedID: 24929560 |
| Gene_locus related to this paper: sacvd-c7mve8 |
| Title : Complete sequencing and pan-genomic analysis of Lactobacillus delbrueckii subsp. bulgaricus reveal its genetic basis for industrial yogurt production - Hao_2011_PLoS.One_6_e15964 |
| Author(s) : Hao P , Zheng H , Yu Y , Ding G , Gu W , Chen S , Yu Z , Ren S , Oda M , Konno T , Wang S , Li X , Ji ZS , Zhao G |
| Ref : PLoS ONE , 6 :e15964 , 2011 |
| Abstract : |
| PubMedSearch : Hao_2011_PLoS.One_6_e15964 |
| PubMedID: 21264216 |
| Gene_locus related to this paper: lacda-q1g8l1 , lacdl-pip |
| Title : Nafamostat is hydrolysed by human liver cytosolic long-chain acyl-CoA hydrolase - Yamaori_2007_Xenobiotica_37_260 |
| Author(s) : Yamaori S , Ukena E , Fujiyama N , Funahashi T , Kimura T , Yamamoto I , Ohshima T , Matsumura K , Oda M , Watanabe K |
| Ref : Xenobiotica , 37 :260 , 2007 |
| Abstract : |
| PubMedSearch : Yamaori_2007_Xenobiotica_37_260 |
| PubMedID: 17624024 |
| Title : Involvement of human blood arylesterases and liver microsomal carboxylesterases in nafamostat hydrolysis - Yamaori_2006_Drug.Metab.Pharmacokinet_21_147 |
| Author(s) : Yamaori S , Fujiyama N , Kushihara M , Funahashi T , Kimura T , Yamamoto I , Sone T , Isobe M , Ohshima T , Matsumura K , Oda M , Watanabe K |
| Ref : Drug Metab Pharmacokinet , 21 :147 , 2006 |
| Abstract : |
| PubMedSearch : Yamaori_2006_Drug.Metab.Pharmacokinet_21_147 |
| PubMedID: 16702735 |
| Title : [Pathophysiology and treatment of vascular dementia] - |
| Author(s) : Udaka F , Oda M , Kameyama M |
| Ref : Nihon Ronen Igakkai Zasshi , 41 :1 , 2004 |
| PubMedID: 14999902 |
| Title : Vascular endothelial growth factor increases fenestral permeability in hepatic sinusoidal endothelial cells - Yokomori_2003_Liver.Int_23_467 |
| Author(s) : Yokomori H , Oda M , Yoshimura K , Nagai T , Ogi M , Nomura M , Ishii H |
| Ref : Liver Int , 23 :467 , 2003 |
| Abstract : |
| PubMedSearch : Yokomori_2003_Liver.Int_23_467 |
| PubMedID: 14986821 |