| Title : Complete Genome Sequence of Algoriphagus sp. Strain M8-2, Isolated from a Brackish Lake - Muraguchi_2016_Genome.Announc_4_e00347 |
| Author(s) : Muraguchi Y , Kushimoto K , Ohtsubo Y , Suzuki T , Dohra H , Kimbara K , Shintani M |
| Ref : Genome Announc , 4 : , 2016 |
| Abstract : |
| PubMedSearch : Muraguchi_2016_Genome.Announc_4_e00347 |
| PubMedID: 27174266 |
| Gene_locus related to this paper: 9bact-a0a142ekx2 |
| Title : Complete Genome Sequence of Polychlorinated Biphenyl Degrader Comamonas testosteroni TK102 (NBRC 109938) - Fukuda_2014_Genome.Announc_2_e00865 |
| Author(s) : Fukuda K , Hosoyama A , Tsuchikane K , Ohji S , Yamazoe A , Fujita N , Shintani M , Kimbara K |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : |
| PubMedSearch : Fukuda_2014_Genome.Announc_2_e00865 |
| PubMedID: 25212615 |
| Gene_locus related to this paper: comte-a0h7e1 , comte-d8d186 |
| Title : Complete Genome Sequence of the Thermophilic Polychlorinated Biphenyl Degrader Geobacillus sp. Strain JF8 (NBRC 109937) - Shintani_2014_Genome.Announc_2_e01213 |
| Author(s) : Shintani M , Ohtsubo Y , Fukuda K , Hosoyama A , Ohji S , Yamazoe A , Fujita N , Nagata Y , Tsuda M , Hatta T , Kimbara K |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : |
| PubMedSearch : Shintani_2014_Genome.Announc_2_e01213 |
| PubMedID: 24459274 |
| Gene_locus related to this paper: geotn-a4isp0 , 9baci-s5yvc0 , 9baci-s5yzj8 |
| Title : Complete Genome Sequence of the Carbazole Degrader Pseudomonas resinovorans Strain CA10 (NBRC 106553) - Shintani_2013_Genome.Announc_1_e00488 |
| Author(s) : Shintani M , Hosoyama A , Ohji S , Tsuchikane K , Takarada H , Yamazoe A , Fujita N , Nojiri H |
| Ref : Genome Announc , 1 :e00488 , 2013 |
| Abstract : |
| PubMedSearch : Shintani_2013_Genome.Announc_1_e00488 |
| PubMedID: 23887915 |
| Gene_locus related to this paper: psere-s6ale3 , psere-s6ans1 , psere-s6aji0 , psere-s6aev9 , psere-s6amt1 , psere-s6agn4 |
| Title : Pmr, a histone-like protein H1 (H-NS) family protein encoded by the IncP-7 plasmid pCAR1, is a key global regulator that alters host function - Yun_2010_J.Bacteriol_192_4720 |
| Author(s) : Yun CS , Suzuki C , Naito K , Takeda T , Takahashi Y , Sai F , Terabayashi T , Miyakoshi M , Shintani M , Nishida H , Yamane H , Nojiri H |
| Ref : Journal of Bacteriology , 192 :4720 , 2010 |
| Abstract : |
| PubMedSearch : Yun_2010_J.Bacteriol_192_4720 |
| PubMedID: 20639326 |
| Gene_locus related to this paper: psest-bpdF |
| Title : Response of the Pseudomonas host chromosomal transcriptome to carriage of the IncP-7 plasmid pCAR1 - Shintani_2010_Environ.Microbiol_12_1413 |
| Author(s) : Shintani M , Takahashi Y , Tokumaru H , Kadota K , Hara H , Miyakoshi M , Naito K , Yamane H , Nishida H , Nojiri H |
| Ref : Environ Microbiol , 12 :1413 , 2010 |
| Abstract : |
| PubMedSearch : Shintani_2010_Environ.Microbiol_12_1413 |
| PubMedID: 19930443 |
| Gene_locus related to this paper: psest-bpdF |
| Title : The complete nucleotide sequence of pCAR2: pCAR2 and pCAR1 were structurally identical IncP-7 carbazole degradative plasmids - Takahashi_2009_Biosci.Biotechnol.Biochem_73_744 |
| Author(s) : Takahashi Y , Shintani M , Yamane H , Nojiri H |
| Ref : Biosci Biotechnol Biochem , 73 :744 , 2009 |
| Abstract : |
| PubMedSearch : Takahashi_2009_Biosci.Biotechnol.Biochem_73_744 |
| PubMedID: 19270415 |
| Gene_locus related to this paper: psest-bpdF |
| Title : Carbazole-degradative IncP-7 plasmid pCAR1.2 is structurally unstable in Pseudomonas fluorescens Pf0-1, which accumulates catechol, the intermediate of the carbazole degradation pathway - Takahashi_2009_Appl.Environ.Microbiol_75_3920 |
| Author(s) : Takahashi Y , Shintani M , Li L , Yamane H , Nojiri H |
| Ref : Applied Environmental Microbiology , 75 :3920 , 2009 |
| Abstract : |
| PubMedSearch : Takahashi_2009_Appl.Environ.Microbiol_75_3920 |
| PubMedID: 19376894 |
| Gene_locus related to this paper: psest-bpdF |
| Title : High-resolution mapping of plasmid transcriptomes in different host bacteria - Miyakoshi_2009_BMC.Genomics_10_12 |
| Author(s) : Miyakoshi M , Nishida H , Shintani M , Yamane H , Nojiri H |
| Ref : BMC Genomics , 10 :12 , 2009 |
| Abstract : |
| PubMedSearch : Miyakoshi_2009_BMC.Genomics_10_12 |
| PubMedID: 19134166 |
| Gene_locus related to this paper: psest-bpdF |
| Title : The Sphingomonas plasmid pCAR3 is involved in complete mineralization of carbazole - Shintani_2007_J.Bacteriol_189_2007 |
| Author(s) : Shintani M , Urata M , Inoue K , Eto K , Habe H , Omori T , Yamane H , Nojiri H |
| Ref : Journal of Bacteriology , 189 :2007 , 2007 |
| Abstract : |
| PubMedSearch : Shintani_2007_J.Bacteriol_189_2007 |
| PubMedID: 17172338 |
| Gene_locus related to this paper: 9sphn-q0kj70 , 9sphn-q0kjk5 , 9sphn-q0kjm1 , 9sphn-q0kjt3 |
| Title : Large plasmid pCAR2 and class II transposon Tn4676 are functional mobile genetic elements to distribute the carbazole\/dioxin-degradative car gene cluster in different bacteria - Shintani_2005_Appl.Microbiol.Biotechnol_67_370 |
| Author(s) : Shintani M , Yoshida T , Habe H , Omori T , Nojiri H |
| Ref : Applied Microbiology & Biotechnology , 67 :370 , 2005 |
| Abstract : |
| PubMedSearch : Shintani_2005_Appl.Microbiol.Biotechnol_67_370 |
| PubMedID: 15856217 |
| Gene_locus related to this paper: psest-bpdF |
| Title : Recipient range of IncP-7 conjugative plasmid pCAR2 from Pseudomonas putida HS01 is broader than from other Pseudomonas strains - Shintani_2005_Biotechnol.Lett_27_1847 |
| Author(s) : Shintani M , Habe H , Tsuda M , Omori T , Yamane H , Nojiri H |
| Ref : Biotechnol Lett , 27 :1847 , 2005 |
| Abstract : |
| PubMedSearch : Shintani_2005_Biotechnol.Lett_27_1847 |
| PubMedID: 16328978 |
| Gene_locus related to this paper: psest-bpdF |
| Title : Divergent structures of carbazole degradative car operons isolated from gram-negative bacteria - Inoue_2004_Biosci.Biotechnol.Biochem_68_1467 |
| Author(s) : Inoue K , Widada J , Nakai S , Endoh T , Urata M , Ashikawa Y , Shintani M , Saiki Y , Yoshida T , Habe H , Omori T , Nojiri H |
| Ref : Biosci Biotechnol Biochem , 68 :1467 , 2004 |
| Abstract : |
| PubMedSearch : Inoue_2004_Biosci.Biotechnol.Biochem_68_1467 |
| PubMedID: 15277751 |
| Gene_locus related to this paper: 9sphn-q0kj70 , 9sphn-q0kjk5 , 9sphn-q0kjm1 , 9sphn-q0kjt3 , 9sphn-q2pfa3 |
| Title : Complete nucleotide sequence of carbazole\/dioxin-degrading plasmid pCAR1 in Pseudomonas resinovorans strain CA10 indicates its mosaicity and the presence of large catabolic transposon Tn4676 - Maeda_2003_J.Mol.Biol_326_21 |
| Author(s) : Maeda K , Nojiri H , Shintani M , Yoshida T , Habe H , Omori T |
| Ref : Journal of Molecular Biology , 326 :21 , 2003 |
| Abstract : |
| PubMedSearch : Maeda_2003_J.Mol.Biol_326_21 |
| PubMedID: 12547188 |
| Gene_locus related to this paper: psere-Q8GI31 , psest-bpdF |
| Title : Organization and transcriptional characterization of catechol degradation genes involved in carbazole degradation by Pseudomonas resinovorans strain CA10 - Nojiri_2002_Biosci.Biotechnol.Biochem_66_897 |
| Author(s) : Nojiri H , Maeda K , Sekiguchi H , Urata M , Shintani M , Yoshida T , Habe H , Omori T |
| Ref : Biosci Biotechnol Biochem , 66 :897 , 2002 |
| Abstract : |
| PubMedSearch : Nojiri_2002_Biosci.Biotechnol.Biochem_66_897 |
| PubMedID: 12036072 |
| Gene_locus related to this paper: psesp-Q9AQQ0 |