Pseudomonas stutzeri, Pseudomonas putida, Pseudomonas resinovorans Pseudomonas sp., 2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2, 4-dienoate hydrolase
Other strains: Pseudomonas stutzeri (Pseudomonas perfectomarina), Pseudomonas putida (Arthrobacter siderocapsulatus), Pseudomonas resinovorans Pseudomonas sp. XLDN4-9 || . AB047548|13094180 meta-cleavage compound hydrolase [Pseudomonas sp. CA10] is completly identical to psest-bpdF Pseudomonas sp. XLDN4-9 carc || . Pseudomonas resinovorans meta cleavage compound hydrolase Q8GI17 AB088420 completly identical to psest-bpdF
Family : Carbon-carbon_bond_hydrolase
Block : X
Position in NCBI Life Tree : Pseudomonas stutzeri
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms N E > Bacteria N E > Proteobacteria N E > Gammaproteobacteria N E > Pseudomonadales N E > Pseudomonadaceae N E > Pseudomonas N E > Pseudomonas stutzeri group N E > Pseudomonas stutzeri subgroup N E > Pseudomonas stutzeri N EMLNKAEQISE KSESAYVERF VNAGGVETRY LEAGKGQPVI LIHGGGAGAE SEGNWRNVIP ILARHYRVIA MDMLGFGKTA KPDIEYTQDR RIRHLHDFIK AMNFDGKVSI VGNSMGGATG LGVSVLHSEL VNALVLMGSA GLVVEIHEDL RPIINYDFTR EGMVHLVKAL TNDGYKIDDA MINSRYTYAT DEATRKAYVA TMQWIREQGG LFYDPEFIRK VPVPTLVVHG KDDKVVPVET AYKFLDLIDD SWGYIIPHCG HWAMIEHPED FANATLSFLS RRADITRAAA
Title : Pmr, a histone-like protein H1 (H-NS) family protein encoded by the IncP-7 plasmid pCAR1, is a key global regulator that alters host function - Yun_2010_J.Bacteriol_192_4720 |
Author(s) : Yun CS , Suzuki C , Naito K , Takeda T , Takahashi Y , Sai F , Terabayashi T , Miyakoshi M , Shintani M , Nishida H , Yamane H , Nojiri H |
Ref : Journal of Bacteriology , 192 :4720 , 2010 |
Abstract : |
PubMedSearch : Yun_2010_J.Bacteriol_192_4720 |
PubMedID: 20639326 |
Gene_locus related to this paper: psest-bpdF |
Title : Response of the Pseudomonas host chromosomal transcriptome to carriage of the IncP-7 plasmid pCAR1 - Shintani_2010_Environ.Microbiol_12_1413 |
Author(s) : Shintani M , Takahashi Y , Tokumaru H , Kadota K , Hara H , Miyakoshi M , Naito K , Yamane H , Nishida H , Nojiri H |
Ref : Environ Microbiol , 12 :1413 , 2010 |
Abstract : |
PubMedSearch : Shintani_2010_Environ.Microbiol_12_1413 |
PubMedID: 19930443 |
Gene_locus related to this paper: psest-bpdF |
Title : The complete nucleotide sequence of pCAR2: pCAR2 and pCAR1 were structurally identical IncP-7 carbazole degradative plasmids - Takahashi_2009_Biosci.Biotechnol.Biochem_73_744 |
Author(s) : Takahashi Y , Shintani M , Yamane H , Nojiri H |
Ref : Biosci Biotechnol Biochem , 73 :744 , 2009 |
Abstract : |
PubMedSearch : Takahashi_2009_Biosci.Biotechnol.Biochem_73_744 |
PubMedID: 19270415 |
Gene_locus related to this paper: psest-bpdF |
Title : Carbazole-degradative IncP-7 plasmid pCAR1.2 is structurally unstable in Pseudomonas fluorescens Pf0-1, which accumulates catechol, the intermediate of the carbazole degradation pathway - Takahashi_2009_Appl.Environ.Microbiol_75_3920 |
Author(s) : Takahashi Y , Shintani M , Li L , Yamane H , Nojiri H |
Ref : Applied Environmental Microbiology , 75 :3920 , 2009 |
Abstract : |
PubMedSearch : Takahashi_2009_Appl.Environ.Microbiol_75_3920 |
PubMedID: 19376894 |
Gene_locus related to this paper: psest-bpdF |
Title : High-resolution mapping of plasmid transcriptomes in different host bacteria - Miyakoshi_2009_BMC.Genomics_10_12 |
Author(s) : Miyakoshi M , Nishida H , Shintani M , Yamane H , Nojiri H |
Ref : BMC Genomics , 10 :12 , 2009 |
Abstract : |
PubMedSearch : Miyakoshi_2009_BMC.Genomics_10_12 |
PubMedID: 19134166 |
Gene_locus related to this paper: psest-bpdF |
Title : Large plasmid pCAR2 and class II transposon Tn4676 are functional mobile genetic elements to distribute the carbazole\/dioxin-degradative car gene cluster in different bacteria - Shintani_2005_Appl.Microbiol.Biotechnol_67_370 |
Author(s) : Shintani M , Yoshida T , Habe H , Omori T , Nojiri H |
Ref : Applied Microbiology & Biotechnology , 67 :370 , 2005 |
Abstract : |
PubMedSearch : Shintani_2005_Appl.Microbiol.Biotechnol_67_370 |
PubMedID: 15856217 |
Gene_locus related to this paper: psest-bpdF |
Title : Recipient range of IncP-7 conjugative plasmid pCAR2 from Pseudomonas putida HS01 is broader than from other Pseudomonas strains - Shintani_2005_Biotechnol.Lett_27_1847 |
Author(s) : Shintani M , Habe H , Tsuda M , Omori T , Yamane H , Nojiri H |
Ref : Biotechnol Lett , 27 :1847 , 2005 |
Abstract : |
PubMedSearch : Shintani_2005_Biotechnol.Lett_27_1847 |
PubMedID: 16328978 |
Gene_locus related to this paper: psest-bpdF |
Title : Purification and properties of 2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2,4-dienoic acid hydrolase involved in microbial degradation of carbazole - Riddle_2003_Protein.Expr.Purif_28_182 |
Author(s) : Riddle RR , Gibbs PR , Willson RC , Benedik MJ |
Ref : Protein Expr Purif , 28 :182 , 2003 |
Abstract : |
PubMedSearch : Riddle_2003_Protein.Expr.Purif_28_182 |
PubMedID: 12651123 |
Gene_locus related to this paper: psest-bpdF |
Title : Recombinant carbazole-degrading strains for enhanced petroleum processing - Riddle_2003_J.Ind.Microbiol.Biotechnol_30_6 |
Author(s) : Riddle RR , Gibbs PR , Willson RC , Benedik MJ |
Ref : J Ind Microbiol Biotechnol , 30 :6 , 2003 |
Abstract : |
PubMedSearch : Riddle_2003_J.Ind.Microbiol.Biotechnol_30_6 |
PubMedID: 12545380 |
Gene_locus related to this paper: psest-bpdF |
Title : Crystal structure of a histidine-tagged serine hydrolase involved in the carbazole degradation (CarC enzyme) - Habe_2003_Biochem.Biophys.Res.Commun_303_631 |
Author(s) : Habe H , Morii K , Fushinobu S , Nam JW , Ayabe Y , Yoshida T , Wakagi T , Yamane H , Nojiri H , Omori T |
Ref : Biochemical & Biophysical Research Communications , 303 :631 , 2003 |
Abstract : |
PubMedSearch : Habe_2003_Biochem.Biophys.Res.Commun_303_631 |
PubMedID: 12659866 |
Gene_locus related to this paper: jansp-Carc , psest-bpdF |
Title : Complete nucleotide sequence of carbazole\/dioxin-degrading plasmid pCAR1 in Pseudomonas resinovorans strain CA10 indicates its mosaicity and the presence of large catabolic transposon Tn4676 - Maeda_2003_J.Mol.Biol_326_21 |
Author(s) : Maeda K , Nojiri H , Shintani M , Yoshida T , Habe H , Omori T |
Ref : Journal of Molecular Biology , 326 :21 , 2003 |
Abstract : |
PubMedSearch : Maeda_2003_J.Mol.Biol_326_21 |
PubMedID: 12547188 |
Gene_locus related to this paper: psere-Q8GI31 , psest-bpdF |
Title : Genetic characterization and evolutionary implications of a car gene cluster in the carbazole degrader Pseudomonas sp. strain CA10 - Nojiri_2001_J.Bacteriol_183_3663 |
Author(s) : Nojiri H , Sekiguchi H , Maeda K , Urata M , Nakai S , Yoshida T , Habe H , Omori T |
Ref : Journal of Bacteriology , 183 :3663 , 2001 |
Abstract : |
PubMedSearch : Nojiri_2001_J.Bacteriol_183_3663 |
PubMedID: 11371531 |
Gene_locus related to this paper: psesp-Q9AQN6 , psest-bpdF |
Title : Cloning and nucleotide sequence of carbazole catabolic genes from Pseudomonas stutzeri strain OM1, isolated from activated sludge - Ouchiyama_1998_J.Gen.Appl.Microbiol_44_57 |
Author(s) : Ouchiyama N , Miyachi S , Omori T |
Ref : J Gen Appl Microbiol , 44 :57 , 1998 |
Abstract : |
PubMedSearch : Ouchiyama_1998_J.Gen.Appl.Microbiol_44_57 |
PubMedID: 12501294 |
Gene_locus related to this paper: psest-bpdF |
Title : Cloning of genes involved in carbazole degradation of Pseudomonas sp. strain CA10: nucleotide sequences of genes and characterization of meta-cleavage enzymes and hydrolase - Sato_1997_J.Bacteriol_179_4841 |
Author(s) : Sato SI , Ouchiyama N , Kimura T , Nojiri H , Yamane H , Omori T |
Ref : Journal of Bacteriology , 179 :4841 , 1997 |
Abstract : |
PubMedSearch : Sato_1997_J.Bacteriol_179_4841 |
PubMedID: 9244273 |
Gene_locus related to this paper: psesp-Q9AQN6 , psest-bpdF |
Title : Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10 - Sato_1997_J.Bacteriol_179_4850 |
Author(s) : Sato SI , Nam JW , Kasuga K , Nojiri H , Yamane H , Omori T |
Ref : Journal of Bacteriology , 179 :4850 , 1997 |
Abstract : |
PubMedSearch : Sato_1997_J.Bacteriol_179_4850 |
PubMedID: 9244274 |
Gene_locus related to this paper: psesp-Q9AQN6 , psest-bpdF |