YcjY-like
Relationship
Comment
Bacterial proteins. Enzymes of unknown function. YcjY gene involved in uptake and degradation of murein tripeptide under nitrogen starvation in E.Coli. Bacterial cell division gene (PTHR47751 Polyketide transferase af380)
Database
Interpro : IPR051411 Polyketide transferase af380 Polyketide_trans_af380
PIRSF : No PIRSF
Pdoc : No Pdoc
Pfam : No Pfam
Prints : No Print
EC Number : No EC Number
Sequences
| Peptide in | Fasta |
| Nucleotide in | Fasta |
| Alignment with Multalin | Text only |
| Seed alignment with MAFFT | No colour / coloured with Mview |
| Alignment with MAFFT | No colour / coloured with Mview |
| Dendrogram | The dnd file |
| Structure | Name | Proteins |
|---|---|---|
| 2HDW | Crystal structure of hypothetical protein PA2218 from Pseudomonas Aeruginosa | pseae-Y2218 |
| 5XB6 | Crystal structure of YcjY from E. Coli | ecoli-ycjy |
| Gene_locus | Name | Species |
|---|---|---|
| 9baci-q2avg2 | Bacillus weihenstephanensis KBAB4 dienelactone hydrolase | Bacillus weihenstephanensis KBAB4 |
| anade-q2ieh1 | Anaeromyxobacter dehalogenans (strain 2CP-C) hypothetical protein precursor | Anaeromyxobacter dehalogenans |
| bacc1-q73c56 | Bacillus cereus (strain ATCC 10987 and strain G9241) Bacillus thuringiensis serovar israelensis ATCC 35646 hypothetical protein | Bacillus cereus |
| bacfr-q64uj8 | Bacteroides fragilis hypothetical protein | Bacteroides fragilis |
| bacth-BT1121 | Bacteroides thetaiotaomicron decarboxylase domain | Bacteroides thetaiotaomicron |
| bacth-BT1400 | Bacteroides thetaiotaomicron conserved hypothetical protein | Bacteroides thetaiotaomicron |
| brume-BMEI1884 | Brucella melitensis, B. suis B. abortus, B. ceti, dienelactone hydrolase and related enzymes | Brucella melitensis |
| burs3-q39ln1 | Burkholderia lata alpha\/beta superfamily-like hydrolase | Burkholderia sp. |
| chrvo-q7nu54 | Chromobacterium violaceum hypothetical protein | Chromobacterium violaceum |
| ecoli-C0410 | Escherichia coli, Escherichia albertii, protein YcjY Dienelactone_hydrolase | Escherichia coli |
| ecoli-Z0347 | Escherichia coli, hypothetical protein z0347 | Escherichia coli |
| ecoli-Z2445 | Escherichia coli Dienelactone hydrolase hypothetical protein z2445 | Escherichia coli |
| ecoli-ycjy |  Escherichia coli hypothetical protein ycjy Dienelactone hydrolase domain protein |
Escherichia coli |
| metac-MA0419 | Methanosarcina acetivorans membrane protein | Methanosarcina acetivorans |
| pseae-Y2218 | Pseudomonas aeruginosa hypothetical protein pa2218 |
Pseudomonas aeruginosa |
| psesy-PSPTO1580 | Pseudomonas syringae (pv. tomato) conserved hypothetical protein | Pseudomonas syringae |
| ralso-RSC0206 | Ralstonia solanacearum (Pseudomonas solanacearum) hypothetical signal peptide protein rsc0206 | Ralstonia solanacearum |
| shifl-SF1334 | Shigella flexneri, Shigella sonnei, Shigella boydii, Shigella dysenteriae, Putative dienelactone hydrolase and related enzymes | Shigella flexneri |
| shifl-YCJY | Shigella flexneri, Shigella dysenteriae, Shigella sonnei, Shigella boydii, ycjY Dienelactone hydrolase | Shigella flexneri |
| solus-q446e0 | Solibacter usitatus Ellin6076 twin-arginine translocation pathway signal precursor | Solibacter usitatus Ellin6076 |
| staau-c8mfq3 | Staphylococcus aureus Dienelactone hydrolase | Staphylococcus aureus |
| vibpa-VP1677 | Vibrio parahaemolyticus hypothetical protein | Vibrio parahaemolyticus |
| vibpa-VP1678 | Vibrio parahaemolyticus putative dienelactone hydrolase and related enzymes | Vibrio parahaemolyticus |
| xylfa-XF1745 | Xylella fastidiosa hypothetical protein xf1745 | Xylella fastidiosa |
| xylfa-XF1750 | Xylella fastidiosa hypothetical protein xf1750 | Xylella fastidiosa |
| yerpe-YPO2002 | Yersinia pestis Yersinia pseudotuberculosis hypothetical protein ypo2002 | Yersinia pestis |
| zymmo-Q9RH25 | Zymomonas mobilis hypothetical protein | Zymomonas mobilis |
References (2)
| Title : Increased expression of genes involved in uptake and degradation of murein tripeptide under nitrogen starvation in Escherichia coli - Choi_2016_FEMS.Microbiol.Lett_363_ |
| Author(s) : Choi U , Park YH , Kim YR , Seok YJ , Lee CR |
| Ref : FEMS Microbiology Letters , 363 : , 2016 |
| Abstract : |
| PubMedSearch : Choi_2016_FEMS.Microbiol.Lett_363_ |
| PubMedID: 27231238 |
| Gene_locus related to this paper: ecoli-ycjy |
| Title : Harnessing single cell sorting to identify cell division genes and regulators in bacteria - Burke_2013_PLoS.One_8_e60964 |
| Author(s) : Burke C , Liu M , Britton W , Triccas JA , Thomas T , Smith AL , Allen S , Salomon R , Harry E |
| Ref : PLoS ONE , 8 :e60964 , 2013 |
| Abstract : |
| PubMedSearch : Burke_2013_PLoS.One_8_e60964 |
| PubMedID: 23565292 |
| Gene_locus related to this paper: ecoli-ycjy |