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arath-SOBR1

Arabidopsis thaliana AtSOBER1 AT4G22305 gene, chromosome 4 locus:6530298215

Comment

Conserved Carboxylesterase (SOBER1, Is a SUPPRESSOR OF AVRBST-ELICITED RESISTANCE in Arabidopsis by Cunnac et al.. AL021712 O49635 a repetition of the same sequence in tandem Q8GYK2 Q84WK4 are only the N-term part of O49635. Burger et al.<\/A> show that Acyl-protein thioesterase structures present a long tunnel for accommodation of long-chain fatty acids and release the product by use of a flexible loop tunnel lid. Homologous deacetylases use a hydrophobic residue to fix the lid and another residue to close the tunnel entrance. This causes loop rigidity changing the catalytic preference to deacetylation. SOBER1 is a protein deacetylase and not an acylprotein thioesterase

Relationship

Family : LYsophospholipase_carboxylesterase

Block : X

Position in NCBI Life Tree : Arabidopsis thaliana

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Eukaryota N E > Viridiplantae N E > Streptophyta N E > Streptophytina N E > Embryophyta N E > Tracheophyta N E > Euphyllophyta N E > Spermatophyta N E > Magnoliophyta N E > Mesangiospermae N E > eudicotyledons N E > Gunneridae N E > Pentapetalae N E > rosids N E > malvids N E > Brassicales N E > Brassicaceae N E > Camelineae N E > Arabidopsis N E > Arabidopsis thaliana N E

Molecular evidence

Database

Sequence

Peptide

MARTFILWLH GLGDSGPANE PIQTQFKSSE LSNASWLFPS APFNPVTCNN GAVMRSWFDV PELPFKVGSP IDESSVLEAV KNVHAIIDQE IAEGTNPENV FICGLSQGGA LTLASVLLYP KTLGGGAVLS GWVPFTSSII SQFPEEAKKT PILWSHGTDD RMVLFEAGQA ALPFLKEAGV TCEFKAYPGL GHSISNKELK YIESWIKRRL KGSSSTCLQL NCLKEMFH

References (3)

Title : A hydrophobic anchor mechanism defines a deacetylase family that suppresses host response against YopJ effectors - Burger_2017_Nat.Commun_8_2201
Author(s) : Burger M , Willige BC , Chory J
Ref : Nat Commun , 8 :2201 , 2017
Abstract :
PubMedSearch : Burger_2017_Nat.Commun_8_2201
PubMedID: 29259199
Gene_locus related to this paper: maize-b6t1C9 , arath-SOBR1 , arath-SOBRL , arath-AT5G20060

Title : A conserved carboxylesterase is a SUPPRESSOR OF AVRBST-ELICITED RESISTANCE in Arabidopsis - Cunnac_2007_Plant.Cell_19_688
Author(s) : Cunnac S , Wilson A , Nuwer J , Kirik A , Baranage G , Mudgett MB
Ref : Plant Cell , 19 :688 , 2007
Abstract :
PubMedSearch : Cunnac_2007_Plant.Cell_19_688
PubMedID: 17293566
Gene_locus related to this paper: arath-SOBR1 , arath-SOBRL

Title : Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana. - Bevan_1998_Nature_391_485
Author(s) : Bevan M , Bancroft I , Bent E , Love K , Goodman H , Dean C , Bergkamp R , Dirkse W , van Staveren M , Stiekema W , Drost L , Ridley P , Hudson SA , Patel K , Murphy G , Piffanelli P , Wedler H , Wedler E , Wambutt R , Weitzenegger T , Pohl TM , Terryn N , Gielen J , Villarroel R , De Clerck R , van Montagu M , Lecharny A , Auborg S , Gy I , Kreis M , Lao N , Kavanagh T , Hempel S , Kotter P , Entian KD , Rieger M , Schaeffer M , Funk B , Mueller-Auer S , Silvey M , James R , Montfort A , Pons A , Puigdomenech P , Douka A , Voukelatou E , Milioni D , Hatzopoulos P , Piravandi E , Obermaier B , Hilbert H , Duesterhoft A , Moores T , Jones JDG , Eneva T , Palme K , Benes V , Rechman S , Ansorge W , Cooke R , Berger C , Delseny M , Voet M , Volckaert G , Mewes HW , Klosterman S , Schueller C , Chalwatzis N
Ref : Nature , 391 :485 , 1998
Abstract :
PubMedSearch : Bevan_1998_Nature_391_485
PubMedID: 9461215
Gene_locus related to this paper: arath-a4vcl8 , arath-AT4G00500 , arath-AT4g09900 , arath-AT4g12830 , arath-AT4G14290 , arath-AT4G15100 , arath-AT4G16070 , arath-AT4G16690 , arath-AT4G17150 , arath-AT4G17470 , arath-AT4G17480 , arath-AT4G17483 , arath-At4g18550 , arath-SOBR1 , arath-SOBRL , arath-AT4G24380 , arath-AT4G25770 , arath-AT4g30610 , arath-AT4G31020 , arath-AT4G36195 , arath-AT4G37150 , arath-SCP29 , arath-At3g54240 , arath-KAI2.D14L