| Title : Biocuration in the structure-function linkage database: the anatomy of a superfamily - Holliday_2017_Database.(Oxford)_2017_ |
| Author(s) : Holliday GL , Brown SD , Akiva E , Mischel D , Hicks MA , Morris JH , Huang CC , Meng EC , Pegg SC , Ferrin TE , Babbitt PC |
| Ref : Database (Oxford) , 2017 : , 2017 |
| Abstract : |
| PubMedSearch : Holliday_2017_Database.(Oxford)_2017_ |
| PubMedID: 28365730 |
| Title : Covalent docking predicts substrates for haloalkanoate dehalogenase superfamily phosphatases - London_2015_Biochemistry_54_528 |
| Author(s) : London N , Farelli JD , Brown SD , Liu C , Huang H , Korczynska M , Al-Obaidi NF , Babbitt PC , Almo SC , Allen KN , Shoichet BK |
| Ref : Biochemistry , 54 :528 , 2015 |
| Abstract : |
| PubMedSearch : London_2015_Biochemistry_54_528 |
| PubMedID: 25513739 |
| Title : Complete Genome Sequence of Pelosinus sp. Strain UFO1 Assembled Using Single-Molecule Real-Time DNA Sequencing Technology - Brown_2014_Genome.Announc_2_e00881 |
| Author(s) : Brown SD , Utturkar SM , Magnuson TS , Ray AE , Poole FL , Lancaster WA , Thorgersen MP , Adams MW , Elias DA |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : |
| PubMedSearch : Brown_2014_Genome.Announc_2_e00881 |
| PubMedID: 25189589 |
| Gene_locus related to this paper: 9firm-a0a075khn0 , 9firm-a0a075k9b8 , 9firm-a0a075kdm9 |
| Title : Draft Genome Sequence of Rhodococcus rhodochrous Strain ATCC 21198 - Shields-Menard_2014_Genome.Announc_2_e00054 |
| Author(s) : Shields-Menard SA , Brown SD , Klingeman DM , Indest K , Hancock D , Wewalwela JJ , French WT , Donaldson JR |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : |
| PubMedSearch : Shields-Menard_2014_Genome.Announc_2_e00054 |
| PubMedID: 24526639 |
| Gene_locus related to this paper: 9noca-m3a1c7 , 9noca-n1m5b5 , rhorh-w4a013 , rhorh-w3zyh7 |
| Title : Draft Genome Sequence of Serratia sp. Strain ATCC 39006, a Model Bacterium for Analysis of the Biosynthesis and Regulation of Prodigiosin, a Carbapenem, and Gas Vesicles - Fineran_2013_Genome.Announc_1_e01039 |
| Author(s) : Fineran PC , Iglesias Cans MC , Ramsay JP , Wilf NM , Cossyleon D , McNeil MB , Williamson NR , Monson RE , Becher SA , Stanton JA , Brugger K , Brown SD , Salmond GP |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : |
| PubMedSearch : Fineran_2013_Genome.Announc_1_e01039 |
| PubMedID: 24336377 |
| Gene_locus related to this paper: 9entr-v3trx3 , 9entr-v3tk51 , sers3-v3tpf2 |
| Title : Draft Genome Sequence for Caulobacter sp. Strain OR37, a Bacterium Tolerant to Heavy Metals - Utturkar_2013_Genome.Announc_1_E00322 |
| Author(s) : Utturkar SM , Bollmann A , Brzoska RM , Klingeman DM , Epstein SE , Palumbo AV , Brown SD |
| Ref : Genome Announc , 1 :E00322 , 2013 |
| Abstract : |
| PubMedSearch : Utturkar_2013_Genome.Announc_1_E00322 |
| PubMedID: 23792749 |
| Gene_locus related to this paper: cauce-r0d4h5 , cauce-r0czs8 , cauce-r0egx0 , cauce-r0ekv3 , cauce-r0el45 , cauce-r0d077 , cauce-r0d5n4 , cauce-r0d5h3 , cauvi-r0ell8 |
| Title : Draft genome sequences for three mercury-methylating, sulfate-reducing bacteria - Brown_2013_Genome.Announc_1_e00618 |
| Author(s) : Brown SD , Hurt RA, Jr. , Gilmour CC , Elias DA |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : |
| PubMedSearch : Brown_2013_Genome.Announc_1_e00618 |
| PubMedID: 23950126 |
| Gene_locus related to this paper: 9delt-s7u034 , 9delt-s7u937 , desml-s7vd27 |
| Title : Draft Genome Sequence for Ralstonia sp. Strain OR214, a Bacterium with Potential for Bioremediation - Utturkar_2013_Genome.Announc_1_e00321 |
| Author(s) : Utturkar SM , Bollmann A , Brzoska RM , Klingeman DM , Epstein SE , Palumbo AV , Brown SD |
| Ref : Genome Announc , 1 :e00321 , 2013 |
| Abstract : |
| PubMedSearch : Utturkar_2013_Genome.Announc_1_e00321 |
| PubMedID: 23792748 |
| Gene_locus related to this paper: 9rals-e2t199 , ralpi-r0e2r5 , ralpi-r0e3r3 , ralpi-a0a080w8m5 |
| Title : Draft Genome Sequence for Desulfovibrio africanus Strain PCS - Brown_2013_Genome.Announc_1_e0014413 |
| Author(s) : Brown SD , Utturkar SM , Arkin AP , Deutschbauer AM , Elias DA , Hazen TC , Chakraborty R |
| Ref : Genome Announc , 1 :e0014413 , 2013 |
| Abstract : |
| PubMedSearch : Brown_2013_Genome.Announc_1_e0014413 |
| PubMedID: 23580709 |
| Gene_locus related to this paper: desaf-f3z0v1 , desaf-f3ywu6 |
| Title : Draft genome sequences for two metal-reducing Pelosinus fermentans strains isolated from a Cr(VI)-contaminated site and for type strain R7 - Brown_2012_J.Bacteriol_194_5147 |
| Author(s) : Brown SD , Podar M , Klingeman DM , Johnson CM , Yang ZK , Utturkar SM , Land ML , Mosher JJ , Hurt RA, Jr. , Phelps TJ , Palumbo AV , Arkin AP , Hazen TC , Elias DA |
| Ref : Journal of Bacteriology , 194 :5147 , 2012 |
| Abstract : |
| PubMedSearch : Brown_2012_J.Bacteriol_194_5147 |
| PubMedID: 22933770 |
| Gene_locus related to this paper: 9firm-i9num7 , 9firm-i9lkp7 |
| Title : Draft genome sequence of Rhizobium sp. strain PDO1-076, a bacterium isolated from Populus deltoides - Brown_2012_J.Bacteriol_194_2383 |
| Author(s) : Brown SD , Klingeman DM , Lu TY , Johnson CM , Utturkar SM , Land ML , Schadt CW , Doktycz MJ , Pelletier DA |
| Ref : Journal of Bacteriology , 194 :2383 , 2012 |
| Abstract : |
| PubMedSearch : Brown_2012_J.Bacteriol_194_2383 |
| PubMedID: 22493196 |
| Gene_locus related to this paper: 9rhiz-h4f7c5 , 9rhiz-h4f4d6 , 9rhiz-h4f3c4 , 9rhiz-h4fct0 |
| Title : Genome sequences for six Rhodanobacter strains, isolated from soils and the terrestrial subsurface, with variable denitrification capabilities - Kostka_2012_J.Bacteriol_194_4461 |
| Author(s) : Kostka JE , Green SJ , Rishishwar L , Prakash O , Katz LS , Marino-Ramirez L , Jordan IK , Munk C , Ivanova N , Mikhailova N , Watson DB , Brown SD , Palumbo AV , Brooks SC |
| Ref : Journal of Bacteriology , 194 :4461 , 2012 |
| Abstract : |
| PubMedSearch : Kostka_2012_J.Bacteriol_194_4461 |
| PubMedID: 22843592 |
| Gene_locus related to this paper: 9gamm-i4vlj9 , 9gamm-i4vny4 , 9gamm-i4vr63 , 9gamm-i4vrr3 , 9gamm-i4vwt1 , 9gamm-i4w9j1 , 9gamm-i4w583 , 9gamm-i4wcv0 , 9gamm-i4wm84 , 9gamm-i4wa25 , 9gamm-i4w709 , 9gamm-i4w119 , 9gamm-i4vhy2 , 9gamm-m4ni10 , 9gamm-i4vtb8 , 9gamm-i4vya7 , 9gamm-i4vpb1 , 9gamm-i4vzq8 , 9gamm-i4vw59 |
| Title : Draft genome sequence for Microbacterium laevaniformans strain OR221, a bacterium tolerant to metals, nitrate, and low pH - Brown_2012_J.Bacteriol_194_3279 |
| Author(s) : Brown SD , Palumbo AV , Panikov N , Ariyawansa T , Klingeman DM , Johnson CM , Land ML , Utturkar SM , Epstein SS |
| Ref : Journal of Bacteriology , 194 :3279 , 2012 |
| Abstract : |
| PubMedSearch : Brown_2012_J.Bacteriol_194_3279 |
| PubMedID: 22628508 |
| Gene_locus related to this paper: 9mico-h8e8b0 |
| Title : Genome sequence of the mercury-methylating strain Desulfovibrio desulfuricans ND132 - Brown_2011_J.Bacteriol_193_2078 |
| Author(s) : Brown SD , Gilmour CC , Kucken AM , Wall JD , Elias DA , Brandt CC , Podar M , Chertkov O , Held B , Bruce DC , Detter JC , Tapia R , Han CS , Goodwin LA , Cheng JF , Pitluck S , Woyke T , Mikhailova N , Ivanova NN , Han J , Lucas S , Lapidus AL , Land ML , Hauser LJ , Palumbo AV |
| Ref : Journal of Bacteriology , 193 :2078 , 2011 |
| Abstract : |
| PubMedSearch : Brown_2011_J.Bacteriol_193_2078 |
| PubMedID: 21357488 |
| Gene_locus related to this paper: desde-f0jku0 |
| Title : Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20 - Hauser_2011_J.Bacteriol_193_4268 |
| Author(s) : Hauser LJ , Land ML , Brown SD , Larimer F , Keller KL , Rapp-Giles BJ , Price MN , Lin M , Bruce DC , Detter JC , Tapia R , Han CS , Goodwin LA , Cheng JF , Pitluck S , Copeland A , Lucas S , Nolan M , Lapidus AL , Palumbo AV , Wall JD |
| Ref : Journal of Bacteriology , 193 :4268 , 2011 |
| Abstract : |
| PubMedSearch : Hauser_2011_J.Bacteriol_193_4268 |
| PubMedID: 21685289 |
| Gene_locus related to this paper: desag-q310n6 |
| Title : Draft genome sequence of the polycyclic aromatic hydrocarbon-degrading, genetically engineered bioluminescent bioreporter Pseudomonas fluorescens HK44 - Chauhan_2011_J.Bacteriol_193_5009 |
| Author(s) : Chauhan A , Layton AC , Williams DE , Smartt AE , Ripp S , Karpinets TV , Brown SD , Sayler GS |
| Ref : Journal of Bacteriology , 193 :5009 , 2011 |
| Abstract : |
| PubMedSearch : Chauhan_2011_J.Bacteriol_193_5009 |
| PubMedID: 21742869 |
| Gene_locus related to this paper: psefl-a0a010tcz6 , psefl-a0a010sip7 , psefl-a0a010suy3 , psefl-a0a010sig8 |
| Title : Draft genome sequence of the thermoalkaliphilic Caldalkalibacillus thermarum strain TA2.A1 - Kalamorz_2011_J.Bacteriol_193_4290 |
| Author(s) : Kalamorz F , Keis S , McMillan DG , Olsson K , Stanton JA , Stockwell P , Black MA , Klingeman DM , Land ML , Han CS , Martin SL , Becher SA , Peddie CJ , Morgan HW , Matthies D , Preiss L , Meier T , Brown SD , Cook GM |
| Ref : Journal of Bacteriology , 193 :4290 , 2011 |
| Abstract : |
| PubMedSearch : Kalamorz_2011_J.Bacteriol_193_4290 |
| PubMedID: 21685297 |
| Gene_locus related to this paper: 9baci-f5l4c2 , 9baci-f5l4h2 , 9baci-f5l4h3 |
| Title : Genome sequence of the mercury-methylating and pleomorphic Desulfovibrio africanus Strain Walvis Bay - Brown_2011_J.Bacteriol_193_4037 |
| Author(s) : Brown SD , Wall JD , Kucken AM , Gilmour CC , Podar M , Brandt CC , Teshima H , Detter JC , Han CS , Land ML , Lucas S , Han J , Pennacchio L , Nolan M , Pitluck S , Woyke T , Goodwin L , Palumbo AV , Elias DA |
| Ref : Journal of Bacteriology , 193 :4037 , 2011 |
| Abstract : |
| PubMedSearch : Brown_2011_J.Bacteriol_193_4037 |
| PubMedID: 21642452 |
| Gene_locus related to this paper: desaf-f3ywu6 |
| Title : Complete genome sequence of the cellulolytic thermophile Caldicellulosiruptor obsidiansis OB47T - Elkins_2010_J.Bacteriol_192_6099 |
| Author(s) : Elkins JG , Lochner A , Hamilton-Brehm SD , Davenport KW , Podar M , Brown SD , Land ML , Hauser LJ , Klingeman DM , Raman B , Goodwin LA , Tapia R , Meincke LJ , Detter JC , Bruce DC , Han CS , Palumbo AV , Cottingham RW , Keller M , Graham DE |
| Ref : Journal of Bacteriology , 192 :6099 , 2010 |
| Abstract : |
| PubMedSearch : Elkins_2010_J.Bacteriol_192_6099 |
| PubMedID: 20851897 |
| Gene_locus related to this paper: caloo-d9tg02 |