| Title : Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34 - Anderson_2016_Stand.Genomic.Sci_11_70 |
| Author(s) : Anderson IJ , DasSarma P , Lucas S , Copeland A , Lapidus A , Del Rio TG , Tice H , Dalin E , Bruce DC , Goodwin L , Pitluck S , Sims D , Brettin TS , Detter JC , Han CS , Larimer F , Hauser L , Land M , Ivanova N , Richardson P , Cavicchioli R , DasSarma S , Woese CR , Kyrpides NC |
| Ref : Stand Genomic Sci , 11 :70 , 2016 |
| Abstract : Anderson_2016_Stand.Genomic.Sci_11_70 |
| ESTHER : Anderson_2016_Stand.Genomic.Sci_11_70 |
| PubMedSearch : Anderson_2016_Stand.Genomic.Sci_11_70 |
| PubMedID: 27617060 |
| Gene_locus related to this paper: hallt-metxa |
| Title : Complete genome sequences for 59 burkholderia isolates, both pathogenic and near neighbor - Johnson_2015_Genome.Announc_3_ |
| Author(s) : Johnson SL , Bishop-Lilly KA , Ladner JT , Daligault HE , Davenport KW , Jaissle J , Frey KG , Koroleva GI , Bruce DC , Coyne SR , Broomall SM , Li PE , Teshima H , Gibbons HS , Palacios GF , Rosenzweig CN , Redden CL , Xu Y , Minogue TD , Chain PS |
| Ref : Genome Announc , 3 : , 2015 |
| Abstract : Johnson_2015_Genome.Announc_3_ |
| ESTHER : Johnson_2015_Genome.Announc_3_ |
| PubMedSearch : Johnson_2015_Genome.Announc_3_ |
| PubMedID: 25931592 |
| Title : Complete Genome Sequence of Bacillus thuringiensis Serovar Israelensis Strain HD-789 - Doggett_2013_Genome.Announc_1_e01023 |
| Author(s) : Doggett NA , Stubben CJ , Chertkov O , Bruce DC , Detter JC , Johnson SL , Han CS |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : Doggett_2013_Genome.Announc_1_e01023 |
| ESTHER : Doggett_2013_Genome.Announc_1_e01023 |
| PubMedSearch : Doggett_2013_Genome.Announc_1_e01023 |
| PubMedID: 24309743 |
| Gene_locus related to this paper: bacce-BC2171 , bacce-BC2337 , bacce-BC4102 |
| Title : Complete Genome Sequence of the Encephalomyelitic Burkholderia pseudomallei Strain MSHR305 - Stone_2013_Genome.Announc_1_e00656 |
| Author(s) : Stone JK , Johnson SL , Bruce DC , Detter JC , Mayo M , Currie BJ , Gelhaus HC , Keim P , Tuanyok A |
| Ref : Genome Announc , 1 :e00656 , 2013 |
| Abstract : Stone_2013_Genome.Announc_1_e00656 |
| ESTHER : Stone_2013_Genome.Announc_1_e00656 |
| PubMedSearch : Stone_2013_Genome.Announc_1_e00656 |
| PubMedID: 23969058 |
| Gene_locus related to this paper: burma-a5tq93 , burma-q62mq7 |
| Title : Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens - Aylward_2013_Genome.Announc_1_E00238 |
| Author(s) : Aylward FO , Tremmel DM , Bruce DC , Chain P , Chen A , Walston Davenport K , Detter C , Han CS , Han J , Huntemann M , Ivanova NN , Kyrpides NC , Markowitz V , Mavrommatis K , Nolan M , Pagani I , Pati A , Pitluck S , Deshpande S , Goodwin L , Woyke T , Currie CR |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : Aylward_2013_Genome.Announc_1_E00238 |
| ESTHER : Aylward_2013_Genome.Announc_1_E00238 |
| PubMedSearch : Aylward_2013_Genome.Announc_1_E00238 |
| PubMedID: 23469353 |
| Gene_locus related to this paper: entbf-l0m2y4 , ecolx-e0qx45 , entbf-l0lyj5 , entbf-l0m5k3 , entbf-l0m5q3 |
| Title : Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens - Aylward_2013_Genome.Announc_1_e0023912 |
| Author(s) : Aylward FO , Tremmel DM , Starrett GJ , Bruce DC , Chain P , Chen A , Davenport KW , Detter C , Han CS , Han J , Huntemann M , Ivanova NN , Kyrpides NC , Markowitz V , Mavrommatis K , Nolan M , Pagani I , Pati A , Pitluck S , Teshima H , Deshpande S , Goodwin L , Woyke T , Currie CR |
| Ref : Genome Announc , 1 :e0023912 , 2013 |
| Abstract : Aylward_2013_Genome.Announc_1_e0023912 |
| ESTHER : Aylward_2013_Genome.Announc_1_e0023912 |
| PubMedSearch : Aylward_2013_Genome.Announc_1_e0023912 |
| PubMedID: 23516234 |
| Gene_locus related to this paper: serma-l0mn97 , serma-l0mh84 , serma-l0mif0 |
| Title : Temperature regulation of virulence factors in the pathogen Vibrio coralliilyticus - Kimes_2012_ISME.J_6_835 |
| Author(s) : Kimes NE , Grim CJ , Johnson WR , Hasan NA , Tall BD , Kothary MH , Kiss H , Munk AC , Tapia R , Green L , Detter C , Bruce DC , Brettin TS , Colwell RR , Morris PJ |
| Ref : Isme J , 6 :835 , 2012 |
| Abstract : Kimes_2012_ISME.J_6_835 |
| ESTHER : Kimes_2012_ISME.J_6_835 |
| PubMedSearch : Kimes_2012_ISME.J_6_835 |
| PubMedID: 22158392 |
| Gene_locus related to this paper: 9vibr-c9nnl3 , 9vibr-c9nqc3 , 9vibr-c9ntb8 , vibcr-c9nnv6 , 9vibr-u0f626 |
| Title : Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park - Mead_2012_Stand.Genomic.Sci_6_381 |
| Author(s) : Mead DA , Lucas S , Copeland A , Lapidus A , Cheng JF , Bruce DC , Goodwin LA , Pitluck S , Chertkov O , Zhang X , Detter JC , Han CS , Tapia R , Land M , Hauser LJ , Chang YJ , Kyrpides NC , Ivanova NN , Ovchinnikova G , Woyke T , Brumm C , Hochstein R , Schoenfeld T , Brumm P |
| Ref : Stand Genomic Sci , 6 :381 , 2012 |
| Abstract : Mead_2012_Stand.Genomic.Sci_6_381 |
| ESTHER : Mead_2012_Stand.Genomic.Sci_6_381 |
| PubMedSearch : Mead_2012_Stand.Genomic.Sci_6_381 |
| PubMedID: 23408395 |
| Gene_locus related to this paper: geos4-d3efm9 |
| Title : Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20 - Hauser_2011_J.Bacteriol_193_4268 |
| Author(s) : Hauser LJ , Land ML , Brown SD , Larimer F , Keller KL , Rapp-Giles BJ , Price MN , Lin M , Bruce DC , Detter JC , Tapia R , Han CS , Goodwin LA , Cheng JF , Pitluck S , Copeland A , Lucas S , Nolan M , Lapidus AL , Palumbo AV , Wall JD |
| Ref : Journal of Bacteriology , 193 :4268 , 2011 |
| Abstract : Hauser_2011_J.Bacteriol_193_4268 |
| ESTHER : Hauser_2011_J.Bacteriol_193_4268 |
| PubMedSearch : Hauser_2011_J.Bacteriol_193_4268 |
| PubMedID: 21685289 |
| Gene_locus related to this paper: desag-q310n6 |
| Title : Genome Sequence of the ethene- and vinyl chloride-oxidizing actinomycete Nocardioides sp. strain JS614 - Coleman_2011_J.Bacteriol_193_3399 |
| Author(s) : Coleman NV , Wilson NL , Barry K , Brettin TS , Bruce DC , Copeland A , Dalin E , Detter JC , Del Rio TG , Goodwin LA , Hammon NM , Han S , Hauser LJ , Israni S , Kim E , Kyrpides N , Land ML , Lapidus A , Larimer FW , Lucas S , Pitluck S , Richardson P , Schmutz J , Tapia R , Thompson S , Tice HN , Spain JC , Gossett JG , Mattes TE |
| Ref : Journal of Bacteriology , 193 :3399 , 2011 |
| Abstract : Coleman_2011_J.Bacteriol_193_3399 |
| ESTHER : Coleman_2011_J.Bacteriol_193_3399 |
| PubMedSearch : Coleman_2011_J.Bacteriol_193_3399 |
| PubMedID: 21551312 |
| Gene_locus related to this paper: nocsj-a1sil5 |
| Title : Complete genome sequences of Krokinobacter sp. strain 4H-3-7-5 and Lacinutrix sp. strain 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae - Klippel_2011_J.Bacteriol_193_4545 |
| Author(s) : Klippel B , Lochner A , Bruce DC , Davenport KW , Detter C , Goodwin LA , Han J , Han S , Hauser L , Land ML , Nolan M , Ovchinnikova G , Pennacchio L , Pitluck S , Tapia R , Woyke T , Wiebusch S , Basner A , Abe F , Horikoshi K , Keller M , Antranikian G |
| Ref : Journal of Bacteriology , 193 :4545 , 2011 |
| Abstract : Klippel_2011_J.Bacteriol_193_4545 |
| ESTHER : Klippel_2011_J.Bacteriol_193_4545 |
| PubMedSearch : Klippel_2011_J.Bacteriol_193_4545 |
| PubMedID: 21725025 |
| Gene_locus related to this paper: lacs5-f6gdi8 , doks4-f4b2f7 |
| Title : Genome sequence of the methanotrophic alphaproteobacterium Methylocystis sp. strain Rockwell (ATCC 49242) - Stein_2011_J.Bacteriol_193_2668 |
| Author(s) : Stein LY , Bringel F , DiSpirito AA , Han S , Jetten MS , Kalyuzhnaya MG , Kits KD , Klotz MG , Op den Camp HJ , Semrau JD , Vuilleumier S , Bruce DC , Cheng JF , Davenport KW , Goodwin L , Hauser L , Lajus A , Land ML , Lapidus A , Lucas S , Medigue C , Pitluck S , Woyke T |
| Ref : Journal of Bacteriology , 193 :2668 , 2011 |
| Abstract : Stein_2011_J.Bacteriol_193_2668 |
| ESTHER : Stein_2011_J.Bacteriol_193_2668 |
| PubMedSearch : Stein_2011_J.Bacteriol_193_2668 |
| PubMedID: 21441518 |
| Gene_locus related to this paper: 9rhiz-e8ky64 , 9rhiz-e8l0f5 , 9rhiz-e8l1r9 , 9rhiz-e8l2p9 , 9rhiz-e8l5j3 , 9rhiz-e8l733 |
| Title : Genome sequence of the mercury-methylating strain Desulfovibrio desulfuricans ND132 - Brown_2011_J.Bacteriol_193_2078 |
| Author(s) : Brown SD , Gilmour CC , Kucken AM , Wall JD , Elias DA , Brandt CC , Podar M , Chertkov O , Held B , Bruce DC , Detter JC , Tapia R , Han CS , Goodwin LA , Cheng JF , Pitluck S , Woyke T , Mikhailova N , Ivanova NN , Han J , Lucas S , Lapidus AL , Land ML , Hauser LJ , Palumbo AV |
| Ref : Journal of Bacteriology , 193 :2078 , 2011 |
| Abstract : Brown_2011_J.Bacteriol_193_2078 |
| ESTHER : Brown_2011_J.Bacteriol_193_2078 |
| PubMedSearch : Brown_2011_J.Bacteriol_193_2078 |
| PubMedID: 21357488 |
| Gene_locus related to this paper: desde-f0jku0 |
| Title : Complete genome sequence of the marine cellulose- and xylan-degrading bacterium Glaciecola sp. strain 4H-3-7+YE-5 - Klippel_2011_J.Bacteriol_193_4547 |
| Author(s) : Klippel B , Lochner A , Bruce DC , Davenport KW , Detter C , Goodwin LA , Han J , Han S , Land ML , Mikhailova N , Nolan M , Pennacchio L , Pitluck S , Tapia R , Woyke T , Wiebusch S , Basner A , Abe F , Horikoshi K , Keller M , Antranikian G |
| Ref : Journal of Bacteriology , 193 :4547 , 2011 |
| Abstract : Klippel_2011_J.Bacteriol_193_4547 |
| ESTHER : Klippel_2011_J.Bacteriol_193_4547 |
| PubMedSearch : Klippel_2011_J.Bacteriol_193_4547 |
| PubMedID: 21705587 |
| Gene_locus related to this paper: glas4-f4ahz5 , glas4-f4aq74 , glas4-f4ajt2 |
| Title : Complete genome of the cellulolytic ruminal bacterium Ruminococcus albus 7 - Suen_2011_J.Bacteriol_193_5574 |
| Author(s) : Suen G , Stevenson DM , Bruce DC , Chertkov O , Copeland A , Cheng JF , Detter C , Detter JC , Goodwin LA , Han CS , Hauser LJ , Ivanova NN , Kyrpides NC , Land ML , Lapidus A , Lucas S , Ovchinnikova G , Pitluck S , Tapia R , Woyke T , Boyum J , Mead D , Weimer PJ |
| Ref : Journal of Bacteriology , 193 :5574 , 2011 |
| Abstract : Suen_2011_J.Bacteriol_193_5574 |
| ESTHER : Suen_2011_J.Bacteriol_193_5574 |
| PubMedSearch : Suen_2011_J.Bacteriol_193_5574 |
| PubMedID: 21914885 |
| Gene_locus related to this paper: ruma7-e6ujm0 , ruma7-e6ukm6 , rumal-a0a011v2q8 , ruma7-e6ukb2 |
| Title : Comparative genomics of clinical and environmental Vibrio mimicus - Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134 |
| Author(s) : Hasan NA , Grim CJ , Haley BJ , Chun J , Alam M , Taviani E , Hoq M , Munk AC , Saunders E , Brettin TS , Bruce DC , Challacombe JF , Detter JC , Han CS , Xie G , Nair GB , Huq A , Colwell RR |
| Ref : Proc Natl Acad Sci U S A , 107 :21134 , 2010 |
| Abstract : Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134 |
| ESTHER : Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134 |
| PubMedSearch : Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134 |
| PubMedID: 21078967 |
| Gene_locus related to this paper: vibch-VC2610 , vibch-VC2718 , vibch-VCA0688 , vibch-y1892 , vibch-y2276 , vibmi-d0gt41 , vibmi-u4zh77 |
| Title : Complete genome sequence of the cellulolytic thermophile Caldicellulosiruptor obsidiansis OB47T - Elkins_2010_J.Bacteriol_192_6099 |
| Author(s) : Elkins JG , Lochner A , Hamilton-Brehm SD , Davenport KW , Podar M , Brown SD , Land ML , Hauser LJ , Klingeman DM , Raman B , Goodwin LA , Tapia R , Meincke LJ , Detter JC , Bruce DC , Han CS , Palumbo AV , Cottingham RW , Keller M , Graham DE |
| Ref : Journal of Bacteriology , 192 :6099 , 2010 |
| Abstract : Elkins_2010_J.Bacteriol_192_6099 |
| ESTHER : Elkins_2010_J.Bacteriol_192_6099 |
| PubMedSearch : Elkins_2010_J.Bacteriol_192_6099 |
| PubMedID: 20851897 |
| Gene_locus related to this paper: caloo-d9tg02 |
| Title : Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae - Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442 |
| Author(s) : Chun J , Grim CJ , Hasan NA , Lee JH , Choi SY , Haley BJ , Taviani E , Jeon YS , Kim DW , Brettin TS , Bruce DC , Challacombe JF , Detter JC , Han CS , Munk AC , Chertkov O , Meincke L , Saunders E , Walters RA , Huq A , Nair GB , Colwell RR |
| Ref : Proc Natl Acad Sci U S A , 106 :15442 , 2009 |
| Abstract : Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442 |
| ESTHER : Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442 |
| PubMedSearch : Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442 |
| PubMedID: 19720995 |
| Gene_locus related to this paper: vibch-lipas , vibch-VC0135 , vibch-VC1418 , vibch-VC1974 , vibch-VC2432 , vibch-VC2718 , vibch-VCA0063 , vibch-VCA0490 , vibch-VCA0688 , vibch-VCA0754 , vibch-y1892 , vibch-y2276 |
| Title : Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT\/A3, \/Ba4 and \/B1 clusters are located within plasmids - Smith_2007_PLoS.One_2_e1271 |
| Author(s) : Smith TJ , Hill KK , Foley BT , Detter JC , Munk AC , Bruce DC , Doggett NA , Smith LA , Marks JD , Xie G , Brettin TS |
| Ref : PLoS ONE , 2 :e1271 , 2007 |
| Abstract : Smith_2007_PLoS.One_2_e1271 |
| ESTHER : Smith_2007_PLoS.One_2_e1271 |
| PubMedSearch : Smith_2007_PLoS.One_2_e1271 |
| PubMedID: 18060065 |
| Gene_locus related to this paper: clob1-a7fqm2 , clob1-a7fv94 , clobl-a7gbn0 , clobh-pip , clobh-a5i3m0 , clob1-a7fvd9 , clobl-a7gbt4 |
| Title : Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii - Xie_2007_Appl.Environ.Microbiol_73_3536 |
| Author(s) : Xie G , Bruce DC , Challacombe JF , Chertkov O , Detter JC , Gilna P , Han CS , Lucas S , Misra M , Myers GL , Richardson P , Tapia R , Thayer N , Thompson LS , Brettin TS , Henrissat B , Wilson DB , McBride MJ |
| Ref : Applied Environmental Microbiology , 73 :3536 , 2007 |
| Abstract : Xie_2007_Appl.Environ.Microbiol_73_3536 |
| ESTHER : Xie_2007_Appl.Environ.Microbiol_73_3536 |
| PubMedSearch : Xie_2007_Appl.Environ.Microbiol_73_3536 |
| PubMedID: 17400776 |
| Gene_locus related to this paper: cyth3-q11pu3 , cyth3-q11rb1 , cyth3-q11sp5 , cyth3-q11sp6 , cyth3-q11ty5 , cyth3-q11vh6 , cyth3-q11vj5 , cyth3-q11w17 , cyth3-q11xy0 |
| Title : The Methanosarcina barkeri genome: comparative analysis with Methanosarcina acetivorans and Methanosarcina mazei reveals extensive rearrangement within methanosarcinal genomes - Maeder_2006_J.Bacteriol_188_7922 |
| Author(s) : Maeder DL , Anderson I , Brettin TS , Bruce DC , Gilna P , Han CS , Lapidus A , Metcalf WW , Saunders E , Tapia R , Sowers KR |
| Ref : Journal of Bacteriology , 188 :7922 , 2006 |
| Abstract : Maeder_2006_J.Bacteriol_188_7922 |
| ESTHER : Maeder_2006_J.Bacteriol_188_7922 |
| PubMedSearch : Maeder_2006_J.Bacteriol_188_7922 |
| PubMedID: 16980466 |
| Gene_locus related to this paper: metbf-q46ca9 , metbf-q469u5 |