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psepu-PIP

Pseudomonas putida proline iminopeptidase

Comment

Other strains: Pseudomonas putida (strains KT2440\; F1 \/ ATCC 700007\; GB-1\; W619\; BIRD-1\; TJI-51\; S16\; ND6\; DOT-T1E\; GM84\; HB3267\; CSV86\; LS46\; TRO1\; H8234\; NBRC 14164\; LF54\; SJ3\; S12\; S610)\; Pseudomonas entomophila (strain L48)\; Pseudomonas plecoglossicida NB2011\; Pseudomonas sp. (VLB120\; FGI182)\; Pseudomonas monteilii (SB3078\; SB3101)

Relationship

Family : Proline_iminopeptidase

Block : X

Position in NCBI Life Tree : Pseudomonas putida

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Bacteria N E > Proteobacteria N E > Gammaproteobacteria N E > Pseudomonadales N E > Pseudomonadaceae N E > Pseudomonas N E > Pseudomonas putida group N E > Pseudomonas putida N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

MQTLYPQIKP YARHDLAVEA PHVLYVDESG SPEGLPVVFI HGGPGAGCDA QSRCYFDPNL YRIITFDQRG CGRSTPHASL ENNTTWHLVE DLERIREHLG IDKWVLFGGS WGSTLALAYA QAHPERVHGL ILRGIFLCRP QEIEWFYQEG ASRLFPDYWQ DYIAPIPPEE RGDLVRAFHK RLTGNDQIAQ MHAAKAWSTW EGRTATLRPN PLVVDRFSEP QRALSIARIE CHYFMNNAFL EPDQLIRDLP KIAHLPAVIV HGRYDVICPL DNAWALHQAW PNSELKVIRD AGHAASEPGI TDALVRAADQ MARRLLDLPL EEA

References (16)

Title : Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital - Molina_2014_PLoS.One_9_e81604
Author(s) : Molina L , Udaondo Z , Duque E , Fernandez M , Molina-Santiago C , Roca A , Porcel M , de la Torre J , Segura A , Plesiat P , Jeannot K , Ramos JL
Ref : PLoS ONE , 9 :e81604 , 2014
Abstract :
PubMedSearch : Molina_2014_PLoS.One_9_e81604
PubMedID: 24465371
Gene_locus related to this paper: psepu-PIP , psepu-PP4249 , psepu-PP4916 , psepu-q9wwz4

Title : The Complete Genome Sequence of Pseudomonas putida NBRC 14164T Confirms High Intraspecies Variation - Ohji_2014_Genome.Announc_2_e00029
Author(s) : Ohji S , Yamazoe A , Hosoyama A , Tsuchikane K , Ezaki T , Fujita N
Ref : Genome Announc , 2 : , 2014
Abstract :
PubMedSearch : Ohji_2014_Genome.Announc_2_e00029
PubMedID: 24526630
Gene_locus related to this paper: psepu-PIP , psepu-PP3943 , psepu-PP4249 , psepu-q9wwz4

Title : Metabolic potential of the organic-solvent tolerant Pseudomonas putida DOT-T1E deduced from its annotated genome - Udaondo_2013_Microb.Biotechnol_6_598
Author(s) : Udaondo Z , Molina L , Daniels C , Gomez MJ , Molina-Henares MA , Matilla MA , Roca A , Fernandez M , Duque E , Segura A , Ramos JL
Ref : Microb Biotechnol , 6 :598 , 2013
Abstract :
PubMedSearch : Udaondo_2013_Microb.Biotechnol_6_598
PubMedID: 23815283
Gene_locus related to this paper: psepu-PIP , psepu-PP3943 , psepu-PP4249 , psepu-q9wwz4

Title : Genome Sequence of Naphthalene-Degrading Soil Bacterium Pseudomonas putida CSV86 - Phale_2013_Genome.Announc_1_E00234
Author(s) : Phale PS , Paliwal V , Raju SC , Modak A , Purohit HJ
Ref : Genome Announc , 1 : , 2013
Abstract :
PubMedSearch : Phale_2013_Genome.Announc_1_E00234
PubMedID: 23469351
Gene_locus related to this paper: psepu-PIP , psepu-l1m569 , psepu-l1lyp4

Title : Draft Genome Sequence of Medium-Chain-Length Polyhydroxyalkanoate-Producing Pseudomonas putida Strain LS46 - Sharma_2013_Genome.Announc_1_e0015113
Author(s) : Sharma PK , Fu J , Zhang X , Fristensky BW , Davenport K , Chain PS , Sparling R , Levin DB
Ref : Genome Announc , 1 :e0015113 , 2013
Abstract :
PubMedSearch : Sharma_2013_Genome.Announc_1_e0015113
PubMedID: 23599293
Gene_locus related to this paper: psepu-PIP , psepu-PP1500 , psepu-PP4249 , psepu-q9wwz4

Title : Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234 - Molina_2013_Genome.Announc_1_e00496
Author(s) : Molina L , Bernal P , Udaondo Z , Segura A , Ramos JL
Ref : Genome Announc , 1 :e00496 , 2013
Abstract :
PubMedSearch : Molina_2013_Genome.Announc_1_e00496
PubMedID: 23868128
Gene_locus related to this paper: psepu-PIP , psepu-PP1500 , psepu-PP3943 , psepu-PP4249 , psepu-q9wwz4

Title : Dechlorination of chloral hydrate is influenced by the biofilm adhesin protein LapA in Pseudomonas putida LF54 - Zhang_2013_Appl.Environ.Microbiol_79_4166
Author(s) : Zhang W , Huhe , Pan Y , Toyofuku M , Nomura N , Nakajima T , Uchiyama H
Ref : Applied Environmental Microbiology , 79 :4166 , 2013
Abstract :
PubMedSearch : Zhang_2013_Appl.Environ.Microbiol_79_4166
PubMedID: 23603683
Gene_locus related to this paper: psepu-PIP , psepu-PP1500 , psepu-PP4249 , psepu-q9wwz4 , psepu-u2t3m5

Title : Draft Genome Sequence of Pseudomonas putida Strain S610, a Seed-Borne Bacterium of Wheat - Wang_2013_Genome.Announc_1_e01048
Author(s) : Wang D , Han CS , Dichosa AE , Gleasner CD , Johnson SL , Daligault HE , Davenport KW , Li PE , Pierson EA , Pierson LS, 3rd
Ref : Genome Announc , 1 : , 2013
Abstract :
PubMedSearch : Wang_2013_Genome.Announc_1_e01048
PubMedID: 24371199
Gene_locus related to this paper: psepu-PIP , psepu-v6jk66 , psepu-v6j3y1

Title : Draft Genome Sequence of Pseudomonas plecoglossicida Strain NB2011, the Causative Agent of White Nodules in Large Yellow Croaker (Larimichthys crocea) - Mao_2013_Genome.Announc_1_e00586
Author(s) : Mao Z , Li M , Chen J
Ref : Genome Announc , 1 : , 2013
Abstract :
PubMedSearch : Mao_2013_Genome.Announc_1_e00586
PubMedID: 23929479
Gene_locus related to this paper: 9psed-s2k464 , psepu-PIP , 9psed-s2k0h8 , 9psed-s2jxx1 , 9psed-s2kmi2

Title : Complete genome sequence of the naphthalene-degrading Pseudomonas putida strain ND6 - Li_2012_J.Bacteriol_194_5154
Author(s) : Li S , Zhao H , Li Y , Niu S , Cai B
Ref : Journal of Bacteriology , 194 :5154 , 2012
Abstract :
PubMedSearch : Li_2012_J.Bacteriol_194_5154
PubMedID: 22933774
Gene_locus related to this paper: psepu-PIP , psepu-PP3943 , psepu-PP4249 , psepu-q9wwz4

Title : Kinetics of medium-chain-length polyhydroxyalkanoate production by a novel isolate of Pseudomonas putida LS46 - Sharma_2012_Can.J.Microbiol_58_982
Author(s) : Sharma PK , Fu J , Cicek N , Sparling R , Levin DB
Ref : Can J Microbiol , 58 :982 , 2012
Abstract :
PubMedSearch : Sharma_2012_Can.J.Microbiol_58_982
PubMedID: 22804681
Gene_locus related to this paper: psepu-PIP , psepu-PP1500 , psepu-PP4249 , psepu-q9wwz4

Title : Twenty-one genome sequences from Pseudomonas species and 19 genome sequences from diverse bacteria isolated from the rhizosphere and endosphere of Populus deltoides - Brown_2012_J.Bacteriol_194_5991
Author(s) : Brown SD , Utturkar SM , Klingeman DM , Johnson CM , Martin SL , Land ML , Lu TY , Schadt CW , Doktycz MJ , Pelletier DA
Ref : Journal of Bacteriology , 194 :5991 , 2012
Abstract :
PubMedSearch : Brown_2012_J.Bacteriol_194_5991
PubMedID: 23045501
Gene_locus related to this paper: 9burk-j0kac2 , 9burk-j0kqh2 , 9burk-j1epu6 , 9rhiz-j3hsc6 , agrrk-b9jlj2 , agrrk-b9jlr1 , braja-pcaD , brebn-c0z527 , psepf-q3k919 , psepu-PIP , 9rhiz-j2b0t6 , 9rhiz-j2b5v7 , 9sphn-j2csl5 , 9sphn-j2da91 , 9sphn-j2dss9 , 9burk-j2kvv7 , 9rhiz-j2l8v8 , 9rhiz-j2lcz2 , 9entr-j2lgp0 , 9flao-j2sqj3 , 9brad-j2w5i6 , 9brad-j2w6z0 , 9sphn-j2w924 , 9sphn-j2wk32 , 9sphn-j2wv03 , 9sphn-j2zvl4 , 9caul-j3aar6 , 9sphn-j3aj11 , 9caul-j3aj83 , 9caul-j3an06 , 9sphn-j3aqd5 , 9caul-j3ati4 , 9entr-j3c1e1 , 9brad-j3cpx3 , 9burk-j3cy68 , 9entr-j3de95 , 9rhiz-j3hvd3 , 9brad-j3hza4 , 9rhiz-j2asm7 , 9rhiz-j2idv1 , 9burk-j2l7t2 , 9psed-j2lun4 , 9psed-j2p2u8 , 9psed-j2pci7 , 9psed-j3dng2 , 9psed-j3dpc9 , 9psed-j3dtv9 , 9psed-j3ebe9 , 9psed-j3ey90 , 9psed-j3ezm7 , 9psed-j3g853 , 9psed-j3gq12 , 9psed-j3har6 , 9psed-j3hd18 , 9brad-j3i495 , 9brad-j3hvp0 , 9rhiz-j3htx9 , 9sphn-j2lbm8 , 9psed-j3a9q8 , 9psed-j2n8k4 , 9sphn-j2gm31 , 9rhiz-j2kud1 , 9burk-j2kv91 , 9burk-j2ktg3 , 9psed-j2na56 , 9psed-w6ve15 , 9psed-j2wmk3 , 9psed-j2rmx2 , 9psed-j2t106 , 9psed-j3gvm6 , 9psed-j2q9u0 , 9psed-j2wr89 , 9burk-j3d9h4 , 9burk-j3cg20 , 9burk-j0kgm2 , 9entr-j2ua00 , 9entr-j2v6d3 , 9entr-j3diy7 , 9burk-j3dit4 , 9rhiz-j3bsd5 , 9psed-j2x4z3 , 9caul-j2gqn4 , 9caul-j2gw95 , 9sphn-j2pjy3 , 9sphn-j2ws91 , 9sphn-j2zyh1 , 9burk-j2lbr7 , 9caul-j2gky7 , 9rhiz-j2ww97 , 9rhiz-j3hls4 , 9rhiz-j2ic95 , 9psed-w6w1j7 , 9rhiz-j2l3f6 , 9psed-a0a068aip7 , 9psed-s2jxx1 , 9burk-j1eha9 , sphya-a0a084e4h2 , 9burk-j3cy50 , 9psed-j3e058 , 9psed-w6v6a4 , 9psed-j3gxm0 , 9rhiz-j2lcu3 , 9rhiz-j2rcz3 , 9burk-j2m4l9 , 9psed-j3b3h3 , 9burk-j3dhf9 , 9burk-j2vbc2 , 9psed-j2nei8 , 9burk-j2vlm0 , 9bacl-l5mp14 , 9psed-w6wbi3 , 9sphn-j2dbb2 , 9rhiz-j2ij37 , 9rhiz-j2kw28 , 9psed-j2n6d9 , 9caul-j2pfh5 , 9sphn-j2wci4 , 9psed-j2wi64 , 9sphn-j3ap33 , 9rhiz-j3hp99 , 9psed-j3ivu6 , 9rhiz-j2v1w2 , 9psed-j2t819 , 9flao-j2krx6 , 9burk-j1eg31 , 9burk-j2kx41 , 9rhiz-j2l0y1 , 9sphn-j2gj61

Title : Complete genome of the plant growth-promoting rhizobacterium Pseudomonas putida BIRD-1 - Matilla_2011_J.Bacteriol_193_1290
Author(s) : Matilla MA , Pizarro-Tobias P , Roca A , Fernandez M , Duque E , Molina L , Wu X , van der Lelie D , Gomez MJ , Segura A , Ramos JL
Ref : Journal of Bacteriology , 193 :1290 , 2011
Abstract :
PubMedSearch : Matilla_2011_J.Bacteriol_193_1290
PubMedID: 21183676
Gene_locus related to this paper: psepk-q88nk6 , psepk-q88qt0 , psepu-ESTB , psepu-PHAC1 , psepu-PHAZ , psepu-PIP , psepu-PP1184 , psepu-PP1500 , psepu-PP3807 , psepu-PP3812 , psepu-PP4178 , psepu-PP4249 , psepu-PP4551 , psepu-PP4583 , psepu-PP4634 , psepu-PP4916 , psepu-PP5117 , psepu-PP5161 , psepu-PP5167 , psepu-PPSD , psepu-q9wwz4

Title : Complete genome sequence of the nicotine-degrading Pseudomonas putida strain S16 - Yu_2011_J.Bacteriol_193_5541
Author(s) : Yu H , Tang H , Wang L , Yao Y , Wu G , Xu P
Ref : Journal of Bacteriology , 193 :5541 , 2011
Abstract :
PubMedSearch : Yu_2011_J.Bacteriol_193_5541
PubMedID: 21914868
Gene_locus related to this paper: psep6-f8g0m2 , psepu-PIP , psepu-PP4249 , psepu-PP4916 , psepu-q9wwz4

Title : Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila - Vodovar_2006_Nat.Biotechnol_24_673
Author(s) : Vodovar N , Vallenet D , Cruveiller S , Rouy Z , Barbe V , Acosta C , Cattolico L , Jubin C , Lajus A , Segurens B , Vacherie B , Wincker P , Weissenbach J , Lemaitre B , Medigue C , Boccard F
Ref : Nat Biotechnol , 24 :673 , 2006
Abstract :
PubMedSearch : Vodovar_2006_Nat.Biotechnol_24_673
PubMedID: 16699499
Gene_locus related to this paper: pseae-PA1622 , psee4-q1i2k0 , psee4-q1i3a7 , psee4-q1i3n8 , psee4-q1i4y6 , psee4-q1i4z6 , psee4-q1i5s3 , psee4-q1i5s9 , psee4-q1i6r6 , psee4-q1i9a0 , psee4-q1i9c3 , psee4-q1i9h5 , psee4-q1i9t2 , psee4-q1iaa7 , psee4-q1ibu9 , psee4-q1icm5 , psee4-q1idp8 , psee4-q1idv7 , psee4-q1ie27 , psee4-q1ie44 , psee4-q1ifj6 , psee4-q1ifn8 , psee4-q1ig13 , psee4-q1ige4 , psep1-a5wax1 , psepg-b0kir7 , psepk-q88nk6 , psepu-METX , psepu-PHAZ , psepu-PIP , psepu-PP1617 , psepu-PP4178 , psepu-PP4551 , psee4-q1icg3

Title : Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440 - Nelson_2002_Environ.Microbiol_4_799
Author(s) : Nelson KE , Weinel C , Paulsen IT , Dodson RJ , Hilbert H , Martins dos Santos VA , Fouts DE , Gill SR , Pop M , Holmes M , Brinkac L , Beanan M , DeBoy RT , Daugherty S , Kolonay J , Madupu R , Nelson W , White O , Peterson J , Khouri H , Hance I , Chris Lee P , Holtzapple E , Scanlan D , Tran K , Moazzez A , Utterback T , Rizzo M , Lee K , Kosack D , Moestl D , Wedler H , Lauber J , Stjepandic D , Hoheisel J , Straetz M , Heim S , Kiewitz C , Eisen JA , Timmis KN , Dusterhoft A , Tummler B , Fraser CM
Ref : Environ Microbiol , 4 :799 , 2002
Abstract :
PubMedSearch : Nelson_2002_Environ.Microbiol_4_799
PubMedID: 12534463
Gene_locus related to this paper: psep1-a5wa77 , psep1-a5wax1 , psepk-q88nk6 , psepk-q88qt0 , psepu-acoc , psepu-BIOH , psepu-bpest , psepu-ESTB , psepu-LIP , psepu-METX , psepu-PHAC1 , psepu-PHAC2 , psepu-PHAG , psepu-PHAZ , psepu-PIP , psepu-PP0375 , psepu-PP0498 , psepu-PP0532 , psepu-PP1064 , psepu-PP1184 , psepu-PP1310 , psepu-PP1500 , psepu-PP1617 , psepu-PP1829 , psepu-PP1979 , psepu-PP2083 , psepu-PP2201 , psepu-PP2236 , psepu-PP2567 , psepu-PP2804 , psepu-PP2934 , psepu-PP3195 , psepu-PP3367 , psepu-PP3404 , psepu-PP3645 , psepu-PP3807 , psepu-PP3812 , psepu-PP3943 , psepu-PP4164 , psepu-PP4165 , psepu-PP4178 , psepu-PP4249 , psepu-PP4540 , psepu-PP4551 , psepu-PP4583 , psepu-PP4624 , psepu-PP4634 , psepu-PP4916 , psepu-PP5117 , psepu-PP5161 , psepu-PP5167 , psepu-PPSD , psepu-Q8KQK1 , psepu-q9wwz4