Plant_phospholipase
Relationship
Comment
Family close to Lipase_3. The DEFECTIVE IN ANTHER DEHISCIENCE gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis. AtDSEL, an Arabidopsis cytosolic DAD1-like acylhydrolase, is involved in negative regulation of storage oil mobilization during seedling establishment. This family is close to Plant_lipase_EDS1-like and belongs to Lipase_3 family
Database
Interpro : IPR000734 Lipase , IPR033556 Phospholipase A1-II PLA
PIRSF : No PIRSF
Pdoc : PDOC00110
Pfam : PF01764 Lipase_3
Prints : PR00821
EC Number : No EC Number
Sequences
| Peptide in | Fasta |
| Nucleotide in | Fasta |
| Alignment with Multalin | Text only |
| Seed alignment with MAFFT | No colour / coloured with Mview |
| Alignment with MAFFT | No colour / coloured with Mview |
| Dendrogram | The dnd file |
| Structure | Name | Proteins |
|---|---|---|
| 2YIJ | Crystal structure of Arabidopsis thaliana (Mouse-ear cress) phospholipase A1 | arath-At4g18550 |
| 7X0C | Crystal structure of Arabidopsis thaliana (Mouse-ear cress) phospholipase A1, AtDSEL | arath-At4g18550 |
| 7X0D | Crystal structure of Capsicum annuum (Capsicum pepper) phospholipase A1, CaPLA1 | capan-a5yw95 |
| Gene_locus | Name | Species |
|---|---|---|
| arath-AT2G42690 | Arabidopsis thaliana (Mouse-ear cress), Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) Phospholipase A1-IIdelta DAD1-like PLA20 | Arabidopsis thaliana |
| arath-AT4G16820 | Arabidopsis thaliana (Mouse-ear cress) (Triacylglycerol lipase like protein) Phospholipase A1-Ibeta2, chloroplastic DAD1-like PLA14 PLA-Ibeta2 | Arabidopsis thaliana |
| arath-At1g30370 | Arabidopsis thaliana (Mouse-ear cress) DAD1-like acylhydrolase lipase, DLAH putative At1g30370 T4K22.3 | Arabidopsis thaliana |
| arath-At4g18550 |  Arabidopsis thaliana (Mouse-ear cress) DSEL Phospholipase A1-IIgamma lipase-like protein |
Arabidopsis thaliana |
| arath-F9P14.11 | Arabidopsis thaliana (Mouse-ear cress) f9p14.11 protein Phospholipase A1-IIalpha PLA18 | Arabidopsis thaliana |
| arath-PLA11 | Arabidopsis thaliana (Mouse-ear cress)Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) T13E15.18 At2g44810 DAD1 DEFECTIVE IN ANTHER DEHISCENCE1 triacyglycerol lipase isolog | Arabidopsis thaliana |
| arath-PLA12 | Arabidopsis thaliana (Mouse-ear cress) Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) t20m3.6, At1g05800, DONGLE Chloroplast-Localized Galactolipase PLA-Ialpha1 | Arabidopsis thaliana |
| arath-PLA13 | Arabidopsis thaliana (Mouse-ear cress), Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) PLA13 At2g31690 T9H9 DAD1-like lipase 5, DALL5 | Arabidopsis thaliana |
| arath-PLA15 | Arabidopsis thaliana (Mouse-ear cress) Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) At1g06800 F4H5_10, PLA15, DAD1-Like Lipase 4, DALL4 Phospholipase A1-Igamma1, chloroplastic PLA-Igamma1 | Arabidopsis thaliana |
| arath-PLA16 | Arabidopsis thaliana (Mouse-ear cress) PLA16 T06B20.10 At2g30550 lipase isolog DAD1-Like Lipase 3, DALL3 PLA-Igamma2 | Arabidopsis thaliana |
| arath-PLA17 | Arabidopsis thaliana (Mouse-ear cress), Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress), PLA17 At1g51440 F5D21.19 Phospholipase A1-Igamma3, chloroplastic, DALL2 PLA-Igamma3 | Arabidopsis thaliana |
| arath-PLA19 | Arabidopsis thaliana (Mouse-ear cress) T16B12.9, At2g31100, PLA19 Phospholipase A1-IIbeta | Arabidopsis thaliana |
| braca-BRDAD1 | Brassica campestris (Field mustard), Brassica oleracea, Brassica rapa, dad1 | Brassica campestris |
| capan-a5yw95 | Capsicum annuum (Capsicum pepper) phospholipase A1, CaPLA1 |
Capsicum annuum |
| diaca-Q9ZTW1 | Dianthus caryophyllus (Carnation) (Clove pink) lipase (fragment) | Dianthus caryophyllus |
| elagv-a0a6i9r390 | Elaeis guineensis var. tenera (Oil palm) phospholipase A1-Ibeta2, chloroplastic LIP2 | Elaeis guineensis |
| nicat-a0a1j6j5f9 | Nicotiana attenuata (Coyote tobacco) Phospholipase a1-ibeta2, chloroplastic Glycerolipase A1 GLA2 NaGLA2 | Nicotiana attenuata |
| nicat-d2stm8 | Nicotiana attenuata (Coyote tobacco) Glycerolipase A1 GLA1 NaGLA1 | Nicotiana attenuata |
| orysa-Q5N8V4 | Oryza sativa subsp. japonica subsp. indica (Rice) p0035f12.13 protein putative dad1 | Oryza sativa |
| orysa-Q5NAI4 | Oryza sativa (Rice) putative lipase. Phospholipase A1-II 5 PLA5 | Oryza sativa |
| orysa-Q5VP27 | Oryza sativa (japonica cultivar-group)\; subsp. indica (Rice), Phospholipase A1-II 2 | Oryza sativa |
| orysa-Q6H8G1 | Oryza sativa subsp. indica subsp. japonica (Rice) lipase-like protein putative defective in anther dehiscence1 | Oryza sativa |
| orysa-Q7XC50 | Oryza sativa subsp. japonica subsp. indica (Rice) putative lipase | Oryza sativa |
| orysa-Q8RZ40 | Oryza sativa subsp. japonica subsp. indica (Rice) lipase-like protein | Oryza sativa |
| orysa-Q8S1D9 | Oryza sativa subsp. indica subsp. japonica (Rice) putative triacylglycerol lipase | Oryza sativa |
| orysa-q2qm78 | Oryza sativa subsp. japonica subsp. indica (Rice) lipase, putative | Oryza sativa |
| orysa-q2qm81 | Oryza sativa (japonica cultivar-group) lipase, putative | Oryza sativa |
| orysa-q2qm82 | Oryza sativa subsp. japonica subsp. indica (Rice) lipase-like protein | Oryza sativa |
| orysa-q2ram0 | Oryza sativa subsp. indica subsp. japonica (Rice) triacylglycerol lipase at2g44810, putative | Oryza sativa |
| orysa-q53mi7 | Oryza sativa (japonica cultivar-group) lipase, putative | Oryza sativa |
| orysa-q53p41 | Oryza sativa (japonica cultivar-group) lipase, putative | Oryza sativa |
| orysa-q6f358 | Oryza sativa subsp. indica subsp. japonica (Rice) PLA6 putative lipase | Oryza sativa |
| orysa-q6i5x8 | Oryza sativa (japonica cultivar-group) 'putative lipase class 3 family protein, pf01764' | Oryza sativa |
| orysa-q6zdm3 | Oryza sativa (japonica cultivar-group) putative defective in anther dehiscence1 | Oryza sativa |
| orysj-PLA7 | Oryza sativa subsp. japonica subsp. indica (Rice) Phospholipase A1-II 7 | Oryza sativa |
| orysj-pla1 | Oryza sativa subsp. japonica \; indica (Rice). Phospholipase A1-II 1 | Oryza sativa subsp. japonica |
| orysj-pla4 | Oryza sativa subsp. japonica (Rice). Phospholipase A1-II 4 | Oryza sativa subsp. japonica |
| parke-chGL | Parachlorella kessleri (green microalga) chGL mRNA for galactolipase | Parachlorella kessleri |
| phani-Q96470 | Pharbitis nil (Violet) (Japanese morning glory) pn47p | Pharbitis nil |
| tobac-a0a1s4ct86 | Nicotiana tabacum (Common tobacco)\; Nicotiana sylvestris Phospholipase A1-Ibeta2, chloroplastic-like GLA1 NtGLA1 | Nicotiana tabacum |
| Gene_locus_frgt | Name | Species |
|---|---|---|
| 9bras-d6pn64 | Capsella grandiflora AT1G06800-like protein | Capsella grandiflora |
| orysa-Q5JLG2 | Oryza sativa subsp. japonica subsp. indica (Rice) OJ1656_A11.13 lipase-like protein | Oryza sativa |
| orysa-q6h7k1 | Oryza sativa (japonica cultivar-group) putative defective in anther dehiscence1 | Oryza sativa |
| solme-EEF53 | Solanum melongena EEF53 mRNA, partial cds | Solanum melongena |
| Substrate | Chemical Nomenclature | Proteins |
|---|---|---|
| 1-palmitoyl-2-linoleoylphosphatidylcholine | [3-hexadecanoyloxy-2-[(9Z,12Z)-octadeca-9,12-dienoyl]oxypropyl] 2-(trimethylazaniumyl)ethyl phosphate | arath-PLA12 human-LCAT human-LIPC human-LIPG |
| DGDG | 3-O-(6-O-R-D-galactopyranosyl-beta-D-galactopyranosyl)-1,2-di-O-dodecanoyl-sn-gycerol | human-PNLIPRP2 talth-f6lqk7 nech7-c7yuz1 helam-a0a2w1b5z2 arath-PLA12 |
| MGDG | [2-octadecanoyloxy-3-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypropyl] octadecanoate | human-PNLIPRP2 nech7-c7yuz1 talth-f6lqk7 helam-a0a2w1b5z2 rhimi-lipas arath-PLA12 cavpo-2plrp |
| POPC | [(2R)-3-hexadecanoyloxy-2-[(Z)-octadec-9-enoyl]oxypropyl] 2-(trimethylazaniumyl)ethyl phosphate | 9entr-PLAA |
| Inhibitor | Chemical Nomenclature | Proteins |
|---|---|---|
| alpha-linolenic-acid | (9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid | nicat-d2stm8 nicat-a0a1j6j5f9 arath-AT4G16820 |
References (6)
| Title : Crystal Structures of the Plant Phospholipase A1 Proteins Reveal a Unique Dimerization Domain - Heo_2022_Molecules_27_2317 |
| Author(s) : Heo Y , Lee I , Moon S , Yun JH , Kim EY , Park SY , Park JH , Kim WT , Lee W |
| Ref : Molecules , 27 : , 2022 |
| Abstract : |
| PubMedSearch : Heo_2022_Molecules_27_2317 |
| PubMedID: 35408716 |
| Gene_locus related to this paper: capan-a5yw95 , arath-At4g18550 |
| Title : Comparative genomic analysis of the Lipase3 gene family in five plant species reveals distinct evolutionary origins - Wang_2018_Genetica_146_179 |
| Author(s) : Wang D , Zhang L , Hu J , Gao D , Liu X , Sha Y |
| Ref : Genetica , 146 :179 , 2018 |
| Abstract : |
| PubMedSearch : Wang_2018_Genetica_146_179 |
| PubMedID: 29468429 |
| Title : AtDSEL, an Arabidopsis cytosolic DAD1-like acylhydrolase, is involved in negative regulation of storage oil mobilization during seedling establishment - Kim_2011_J.Plant.Physiol_168_1705 |
| Author(s) : Kim EY , Seo YS , Kim WT |
| Ref : J Plant Physiol , 168 :1705 , 2011 |
| Abstract : |
| PubMedSearch : Kim_2011_J.Plant.Physiol_168_1705 |
| PubMedID: 21477884 |
| Gene_locus related to this paper: arath-At4g18550 |
| Title : Involvement of DAD1-like lipases in response to salt and osmotic stress in Arabidopsis thaliana - Ellinger_2010_Plant.Signal.Behav_5_1269 |
| Author(s) : Ellinger D , Kubigsteltig, II |
| Ref : Plant Signal Behav , 5 :1269 , 2010 |
| Abstract : |
| PubMedSearch : Ellinger_2010_Plant.Signal.Behav_5_1269 |
| PubMedID: 20855949 |
| Gene_locus related to this paper: arath-At2g15230 , arath-AT4G16820 , arath-PLA12 , arath-PLA15 , arath-PLA16 , arath-PLA17 |
| Title : Phospholipid-derived signaling mediated by phospholipase A in plants - |
| Author(s) : Ryu SB |
| Ref : Trends Plant Sci , 9 :229 , 2004 |
| PubMedID: 15130548 |
| Gene_locus related to this paper: arath-AT2G42690 , arath-AT4G16820 , arath-F9P14.11 , arath-PLA11 , arath-PLA12 , arath-PLA13 , arath-PLA15 , arath-PLA16 , arath-PLA17 , arath-PLA19 , arath-At1g30370 |
| Title : The DEFECTIVE IN ANTHER DEHISCIENCE gene encodes a novel phospholipase A1 catalyzing the initial step of jasmonic acid biosynthesis, which synchronizes pollen maturation, anther dehiscence, and flower opening in Arabidopsis - Ishiguro_2001_Plant.Cell_13_2191 |
| Author(s) : Ishiguro S , Kawai-Oda A , Ueda J , Nishida I , Okada K |
| Ref : Plant Cell , 13 :2191 , 2001 |
| Abstract : |
| PubMedSearch : Ishiguro_2001_Plant.Cell_13_2191 |
| PubMedID: 11595796 |
| Gene_locus related to this paper: arath-PLA11 |