setit-k4a377

Setaria italica (Foxtail millet) (Panicum italicum). AB hydrolase-1 domain-containing protein

Comment

Belongs to a group of large proteins (c.1500 aa) Homologous to wheat Ne1, triggers hybrid necrosis. Only N-term Alpha\/beta Hydrolase, c-term unrelated

Relationship

Family : abh_upf0017

Block : X

Position in NCBI Life Tree : Setaria italica

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Eukaryota N E > Viridiplantae N E > Streptophyta N E > Streptophytina N E > Embryophyta N E > Tracheophyta N E > Euphyllophyta N E > Spermatophyta N E > Magnoliophyta N E > Mesangiospermae N E > Liliopsida N E > Petrosaviidae N E > commelinids N E > Poales N E > Poaceae N E > PACMAD clade N E > Panicoideae N E > Panicodae N E > Paniceae N E > Cenchrinae N E > Setaria N E > Setaria italica N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

ISYQRICVAL EDGGVIALDW PDNLDLDKEH GLDSTVLVVP GTPEGSMERS IKVFVVDALK NGYFPIVMNP RGCGGSPLTT ARLFTAADSD DICTAVRFIN SKRPWTTLMG VGWGYGANML TKYLVEVGES TPLTAAVCID NPFDLQEATR SFPHHIALDQ KLTAGLVDIL RANKELFQGK AKDFDVQKAL SARSLRDFDG AISMVSHGFY TLDDFYSENS TRLSIARVKI PLLFIQSDDG TVPLLSVPRS SISEN

References (2)

Title : Genomic structural variation in an alpha\/beta hydrolase triggers hybrid necrosis in wheat - Si_2025_Nat.Commun_16_2655
Author(s) : Si Y , Zhang H , Ma S , Zheng S , Niu J , Tian S , Cui X , Zhu K , Yan X , Lu Q , Zhang Z , Du T , Lu P , Chen Y , Wu Q , Xie J , Guo G , Gu M , Wu H , Li Y , Yuan C , Li Z , Liu Z , Dong L , Ling HQ , Li M
Ref : Nat Commun , 16 :2655 , 2025
Abstract :
PubMedSearch : Si_2025_Nat.Commun_16_2655
PubMedID: 40102399
Gene_locus related to this paper: tobac-a0a1s4b3b3 , prupe-a0a251nfr6 , wheat-a0a3b6lmj7 , maize-a0a804q8z2 , horvv-a0a8i6xqe8 , orysi-b8bfe4 , sorbi-c5xdl8 , vitvi-f6hgm1 , bradi-i1iqd2 , soybn-i1ms42 , setit-k4a377 , citcl-v4tzv1 , phavu-v7c8r7 , 9rosa-w9sk90

Title : Reference genome sequence of the model plant Setaria - Bennetzen_2012_Nat.Biotechnol_30_555
Author(s) : Bennetzen JL , Schmutz J , Wang H , Percifield R , Hawkins J , Pontaroli AC , Estep M , Feng L , Vaughn JN , Grimwood J , Jenkins J , Barry K , Lindquist E , Hellsten U , Deshpande S , Wang X , Wu X , Mitros T , Triplett J , Yang X , Ye CY , Mauro-Herrera M , Wang L , Li P , Sharma M , Sharma R , Ronald PC , Panaud O , Kellogg EA , Brutnell TP , Doust AN , Tuskan GA , Rokhsar D , Devos KM
Ref : Nat Biotechnol , 30 :555 , 2012
Abstract :
PubMedSearch : Bennetzen_2012_Nat.Biotechnol_30_555
PubMedID: 22580951
Gene_locus related to this paper: setit-k3xwe0 , setit-k3xfs7 , setit-k3yh36 , setit-k3zes3 , setit-k3zlj8 , setvi-a0a4u6wd58 , setit-a0a368qif6 , setit-a0a368sru6 , setit-a0a368q9x4 , setit-k3zri0 , setit-k3ysv0 , setit-k3xj49 , setit-k4ac30 , setit-k4a377