sorbi-c5xdl8

Sorghum bicolor (Sorghum) (Sorghum vulgare). AB hydrolase-1 domain-containing protein

Comment

Belongs to a group of large proteins (c.1500 aa) Homologous to wheat Ne1, triggers hybrid necrosis. Only N-term Alpha\/beta Hydrolase, c-term unrelated

Relationship

Family : abh_upf0017

Block : X

Position in NCBI Life Tree : Sorghum bicolor

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Eukaryota N E > Viridiplantae N E > Streptophyta N E > Streptophytina N E > Embryophyta N E > Tracheophyta N E > Euphyllophyta N E > Spermatophyta N E > Magnoliophyta N E > Mesangiospermae N E > Liliopsida N E > Petrosaviidae N E > commelinids N E > Poales N E > Poaceae N E > PACMAD clade N E > Panicoideae N E > Andropogonodae N E > Andropogoneae N E > Sorghinae N E > Sorghum N E > Sorghum bicolor N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

SYQRICIALE DGGVVALDWP DNLDLDKEHG LDSTVLIVPG THEGSMESSI KVFVLDALKN GYFPIVMNPR GCGGSPVTTP RLFTAADSDD ICTAVQFINS KRPWTTLMGV GWGYGANMLT KYLVEVGEST PLTAAVCIDN PFDLEEATRS FPHHIALDEK LTTGLVDILR ANKELFQGKA KNFNVQKALS ASCLRDFDGA ISMVSHGFDT LHEFYAEIST RLSVAHVKIP LLFIQSDDGT VPLLAVPRSS ISEN

References (3)

Title : Genomic structural variation in an alpha\/beta hydrolase triggers hybrid necrosis in wheat - Si_2025_Nat.Commun_16_2655
Author(s) : Si Y , Zhang H , Ma S , Zheng S , Niu J , Tian S , Cui X , Zhu K , Yan X , Lu Q , Zhang Z , Du T , Lu P , Chen Y , Wu Q , Xie J , Guo G , Gu M , Wu H , Li Y , Yuan C , Li Z , Liu Z , Dong L , Ling HQ , Li M
Ref : Nat Commun , 16 :2655 , 2025
Abstract :
PubMedSearch : Si_2025_Nat.Commun_16_2655
PubMedID: 40102399
Gene_locus related to this paper: tobac-a0a1s4b3b3 , prupe-a0a251nfr6 , wheat-a0a3b6lmj7 , maize-a0a804q8z2 , horvv-a0a8i6xqe8 , orysi-b8bfe4 , sorbi-c5xdl8 , vitvi-f6hgm1 , bradi-i1iqd2 , soybn-i1ms42 , setit-k4a377 , citcl-v4tzv1 , phavu-v7c8r7 , 9rosa-w9sk90

Title : The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization - McCormick_2018_Plant.J_93_338
Author(s) : McCormick RF , Truong SK , Sreedasyam A , Jenkins J , Shu S , Sims D , Kennedy M , Amirebrahimi M , Weers BD , McKinley B , Mattison A , Morishige DT , Grimwood J , Schmutz J , Mullet JE
Ref : Plant J , 93 :338 , 2018
Abstract :
PubMedSearch : McCormick_2018_Plant.J_93_338
PubMedID: 29161754
Gene_locus related to this paper: sorbi-a0a194ysf6 , sorbi-a0a1b6pnr2 , sorbi-a0a1b6qcb9 , sorbi-c5xx30 , sorbi-a0a1b6psg4 , sorbi-a0a1z5rj80 , sorbi-a0a1b6qfm2 , sorbi-a0a1b6qmu5 , sorbi-c6jru0 , sorbi-c5xdl8

Title : The Sorghum bicolor genome and the diversification of grasses - Paterson_2009_Nature_457_551
Author(s) : Paterson AH , Bowers JE , Bruggmann R , Dubchak I , Grimwood J , Gundlach H , Haberer G , Hellsten U , Mitros T , Poliakov A , Schmutz J , Spannagl M , Tang H , Wang X , Wicker T , Bharti AK , Chapman J , Feltus FA , Gowik U , Grigoriev IV , Lyons E , Maher CA , Martis M , Narechania A , Otillar RP , Penning BW , Salamov AA , Wang Y , Zhang L , Carpita NC , Freeling M , Gingle AR , Hash CT , Keller B , Klein P , Kresovich S , McCann MC , Ming R , Peterson DG , Mehboob ur R , Ware D , Westhoff P , Mayer KF , Messing J , Rokhsar DS
Ref : Nature , 457 :551 , 2009
Abstract :
PubMedSearch : Paterson_2009_Nature_457_551
PubMedID: 19189423
Gene_locus related to this paper: sorbi-b3vtb2 , sorbi-c5wp75 , sorbi-c5wts6 , sorbi-c5wu07 , sorbi-c5wvl7 , sorbi-c5ww85 , sorbi-c5ww86 , sorbi-c5wxa4 , sorbi-c5x1f6 , sorbi-c5x2x9 , sorbi-c5x5z9 , sorbi-c5x6q0 , sorbi-c5x230 , sorbi-c5x290 , sorbi-c5x345 , sorbi-c5x399 , sorbi-c5x610 , sorbi-c5xbm4 , sorbi-c5xct0 , sorbi-c5xdv0 , sorbi-c5xe87 , sorbi-c5xf40 , sorbi-c5xfu9 , sorbi-c5xh40 , sorbi-c5xh41 , sorbi-c5xh42 , sorbi-c5xh43 , sorbi-c5xh44 , sorbi-c5xh46 , sorbi-c5xhr2 , sorbi-c5xiw7 , sorbi-c5xjf0 , sorbi-c5xky2 , sorbi-c5xm54 , sorbi-c5xmb9 , sorbi-c5xmz5 , sorbi-c5xp10 , sorbi-c5xpm6 , sorbi-c5xr91 , sorbi-c5xr92 , sorbi-c5xs33 , sorbi-c5xtz0 , sorbi-c5xwd3 , sorbi-c5y0d2 , sorbi-c5y0h4 , sorbi-c5y3i5 , sorbi-c5y7x0 , sorbi-c5y517 , sorbi-c5y545 , sorbi-c5ydr3 , sorbi-c5yec0 , sorbi-c5yf71 , sorbi-c5yi32 , sorbi-c5yih2 , sorbi-c5ylw6 , sorbi-c5yn66 , sorbi-c5ynp8 , sorbi-c5yt11 , sorbi-c5yur5 , sorbi-c5ywz3 , sorbi-c5ywz4 , sorbi-c5yx73 , sorbi-c5yyn0 , sorbi-c5z2m6 , sorbi-c5z6a9 , sorbi-c5z6j1 , sorbi-c5z6s5 , sorbi-c5z177 , sorbi-Q9XE80 , sorbi-c5xyg4 , sorbi-c5z4q0 , sorbi-c5xly4 , sorbi-c5z4u8 , sorbi-c5xxg5 , sorbi-c5z9b9 , sorbi-a0a1z5r970 , sorbi-c5xhf9 , sorbi-c5yxt7 , sorbi-c5yxt6 , sorbi-c5y1m2 , sorbi-c5xdy6 , sorbi-a0a194ysf6 , sorbi-a0a1b6pnr2 , sorbi-a0a1b6qcb9 , sorbi-c5xx30 , sorbi-a0a1b6psg4 , sorbi-a0a1z5rj80 , sorbi-a0a1b6qfm2 , sorbi-a0a1b6qmu5 , sorbi-c6jru0 , sorbi-c5xdl8