Gene_Locus Report

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Gene_locus Report for: ailme-d2gyt0

Ailuropoda melanoleuca (Giant panda) Putative uncharacterized protein

Relationship
Family|DPP4N_Peptidase_S9
Block| X
Position in NCBI Life Tree|Ailuropoda melanoleuca
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Laurasiatheria: N E > Carnivora: N E > Caniformia: N E > Ursidae: N E > Ailuropoda: N E > Ailuropoda melanoleuca: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : GL192385
1 UniProt : D2GYT0
1 UniProt : D2GYT0
1 Interpro : D2GYT0
1 Pfam : D2GYT0
1 PIRSF : D2GYT0
1 SUPERFAM : D2GYT0
Sequence
Graphical view for this peptide sequence: ailme-d2gyt0
Colored MSA for DPP4N_Peptidase_S9 (raw)
GKCNMAAAMETEQLGVEIFETADCEENIESQDRPKLEPFYVERYSWSQLK
KLLADTRKYHGYMMAKAPHDFMFVKRNDPDGPHSDRIYYLAMSGENRENT
LFYSEIPKTINRAAVLMLSWKPLLDLFQATLDYGMYSREEELLRERKRIG
TVGIASYDYHQGSGTFLFQAGSGIYHVKDGGPQGFTQQPLRPNLVETSCP
NIRMDPKLCPADPDWIAFIHSNDIWISNIVTREERRLTYVHNELANMEED
PRSAGVATFVLQEEFDRYSGYWWCPEAETTPSGSKILRILYEENDESEVE
IIHVTSPMLETRRADSFRYPKTGTANPKVTFKMSEIMIDAEGRIIDVIDK
ELIQPFEILFEGVEYIARAGWTPEGKYAWSILLDRSQTRLQIVLISPELF
IPVEDDAMERQRLIESVPDSVTPLIIYEETTDIWINIHDIFHVFPQSHED
EIEFIFASECKTGFRHLYKITSILKESKYKRSSGGLPAPSDFKCPVKEEI
AITSGEWEVLGRHGSNIQVDEVRKLVYFEGTKDSPLEHHLYVVSYVNPGE
VTRLTDRGYSHSCCISQHCDFFISKYSNQKNPHCVSLYKLSSPEDDPTCK
TKEFWATILDSAGPLPDYTPPEIFSFESTTGFTLYGMLYKPHDLQPGKKY
PTVLFIYGGPQVQLVNNRFKGVKYFRLNTLASLGYVVVVIDNRGSCHRGL
KFEGAFKYKMGQIEIDDQVEGLQYLASQYDFIDLDRVGIHGWSYGGYLSL
MALMQRSDIFRVAIAGAPVTLWIFYDTGYTERYMGHPDQNEQGYYLGSVA
MQAEKFPSEPNRLLLLHGFLDENVHFAHTSILLSFLVRAGKPYDLQIYPQ
ERHSIRVPESGEHYELHLLHYLQENLGSRIAALKVI
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

GKCNMAAAMETEQLGVEIFETADCEENIESQDRPKLEPFYVERYSWSQLK
KLLADTRKYHGYMMAKAPHDFMFVKRNDPDGPHSDRIYYLAMSGENRENT
LFYSEIPKTINRAAVLMLSWKPLLDLFQATLDYGMYSREEELLRERKRIG
TVGIASYDYHQGSGTFLFQAGSGIYHVKDGGPQGFTQQPLRPNLVETSCP
NIRMDPKLCPADPDWIAFIHSNDIWISNIVTREERRLTYVHNELANMEED
PRSAGVATFVLQEEFDRYSGYWWCPEAETTPSGSKILRILYEENDESEVE
IIHVTSPMLETRRADSFRYPKTGTANPKVTFKMSEIMIDAEGRIIDVIDK
ELIQPFEILFEGVEYIARAGWTPEGKYAWSILLDRSQTRLQIVLISPELF
IPVEDDAMERQRLIESVPDSVTPLIIYEETTDIWINIHDIFHVFPQSHED
EIEFIFASECKTGFRHLYKITSILKESKYKRSSGGLPAPSDFKCPVKEEI
AITSGEWEVLGRHGSNIQVDEVRKLVYFEGTKDSPLEHHLYVVSYVNPGE
VTRLTDRGYSHSCCISQHCDFFISKYSNQKNPHCVSLYKLSSPEDDPTCK
TKEFWATILDSAGPLPDYTPPEIFSFESTTGFTLYGMLYKPHDLQPGKKY
PTVLFIYGGPQVQLVNNRFKGVKYFRLNTLASLGYVVVVIDNRGSCHRGL
KFEGAFKYKMGQIEIDDQVEGLQYLASQYDFIDLDRVGIHGWSYGGYLSL
MALMQRSDIFRVAIAGAPVTLWIFYDTGYTERYMGHPDQNEQGYYLGSVA
MQAEKFPSEPNRLLLLHGFLDENVHFAHTSILLSFLVRAGKPYDLQIYPQ
ERHSIRVPESGEHYELHLLHYLQENLGSRIAALKVI


Reference
    Title: The sequence and de novo assembly of the giant panda genome
    Li R, Fan W, Tian G, Zhu H, He L, Cai J, Huang Q, Cai Q, Li B and Yang H <103 more author(s)>
    Ref: Nature, 463:311, 2010 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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