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Gene_locus Report for: chlre-a8iwm0

Chlamydomonas reinhardtii (Chlamydomonas smithii) Predicted protein

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Chlamydomonas reinhardtii
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Chlorophyta: N E > Chlorophyceae: N E > Chlamydomonadales: N E > Chlamydomonadaceae: N E > Chlamydomonas: N E > Chlamydomonas reinhardtii: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : DS496126
1 UniProt : A8IWM0
1 UniProt : A8IWM0
1 Interpro : A8IWM0
1 Pfam : A8IWM0
1 PIRSF : A8IWM0
1 SUPERFAM : A8IWM0
Sequence
Graphical view for this peptide sequence: chlre-a8iwm0
Colored MSA for abh_upf0017 (raw)
HYHSNVAVPPRLWVADGPLRERVLPHCSTLLKPFAPTPWAANKHAQTILG
LMRTLTMRNHYNRQLILTVDGATLGLDWFDGCGGGGALSATAPILLVCHG
INGGSHEGYAKWVCAAAVARGWRAVVLNYRGCNGLPFTAPRGYAATLSHD
VYTAVYSVRARFPGAPVFAVGYSLGGLKLTKYLGEADAGLHVPPPGAPRL
FAGSGLDAAAPVTPPPPLWCRLREHLSHHKAEIQALTRFDVESALAAWTV
GEIEDRGLPASFGFSSRQQYYEVAGSLDYIPAITTPTLMLLAEDDPFLGV
IPDAECSRNPNTLLAVTRRGGHVAFLQGAWPLGKAYMDDAVTEFFDATLK
HLHE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

HYHSNVAVPPRLWVADGPLRERVLPHCSTLLKPFAPTPWAANKHAQTILG
LMRTLTMRNHYNRQLILTVDGATLGLDWFDGCGGGGALSATAPILLVCHG
INGGSHEGYAKWVCAAAVARGWRAVVLNYRGCNGLPFTAPRGYAATLSHD
VYTAVYSVRARFPGAPVFAVGYSLGGLKLTKYLGEADAGLHVPPPGAPRL
FAGSGLDAAAPVTPPPPLWCRLREHLSHHKAEIQALTRFDVESALAAWTV
GEIEDRGLPASFGFSSRQQYYEVAGSLDYIPAITTPTLMLLAEDDPFLGV
IPDAECSRNPNTLLAVTRRGGHVAFLQGAWPLGKAYMDDAVTEFFDATLK
HLHE


Reference
    Title: The Chlamydomonas genome reveals the evolution of key animal and plant functions
    Merchant SS, Prochnik SE, Vallon O, Harris EH, Karpowicz SJ, Witman GB, Terry A, Salamov A, Fritz-Laylin LK and Grossman AR <107 more author(s)>
    Ref: Science, 318:245, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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ESTHER Home Page and ACEDB Home Page
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