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Ren Q

References (44)

Title : Clinical and genetic characteristics of CEL-MODY (MODY8): a literature review and screening in Chinese individuals diagnosed with early-onset type 2 diabetes - Sun_2023_Endocrine__
Author(s) : Sun S , Gong S , Li M , Wang X , Wang F , Cai X , Liu W , Luo Y , Zhang S , Zhang R , Zhou L , Zhu Y , Ma Y , Ren Q , Zhang X , Chen J , Chen L , Wu J , Gao L , Zhou X , Li Y , Zhong L , Han X , Ji L
Ref : Endocrine , : , 2023
Abstract :
PubMedSearch : Sun_2023_Endocrine__
PubMedID: 37726640

Title : Eucommia ulmoides Olive Male Flower Extracts Ameliorate Alzheimer's Disease-Like Pathology in Zebrafish via Regulating Autophagy, Acetylcholinesterase, and the Dopamine Transporter - Sun_2022_Front.Mol.Neurosci_15_901953
Author(s) : Sun C , Zhang S , Ba S , Dang J , Ren Q , Zhu Y , Liu K , Jin M
Ref : Front Mol Neurosci , 15 :901953 , 2022
Abstract :
PubMedSearch : Sun_2022_Front.Mol.Neurosci_15_901953
PubMedID: 35754707

Title : The seasonal development dynamics of the yak hair cycle transcriptome - Bao_2020_BMC.Genomics_21_355
Author(s) : Bao P , Luo J , Liu Y , Chu M , Ren Q , Guo X , Tang B , Ding X , Qiu Q , Pan H , Wang K , Yan P
Ref : BMC Genomics , 21 :355 , 2020
Abstract :
PubMedSearch : Bao_2020_BMC.Genomics_21_355
PubMedID: 32393236

Title : Biology and applications of Clonostachys rosea - Sun_2020_J.Appl.Microbiol__
Author(s) : Sun ZB , Li SD , Ren Q , Xu JL , Lu X , Sun MH
Ref : J Appl Microbiol , : , 2020
Abstract :
PubMedSearch : Sun_2020_J.Appl.Microbiol__
PubMedID: 32115828

Title : Key role of soluble epoxide hydrolase in the neurodevelopmental disorders of offspring after maternal immune activation - Ma_2019_Proc.Natl.Acad.Sci.U.S.A_116_7083
Author(s) : Ma M , Ren Q , Yang J , Zhang K , Xiong Z , Ishima T , Pu Y , Hwang SH , Toyoshima M , Iwayama Y , Hisano Y , Yoshikawa T , Hammock BD , Hashimoto K
Ref : Proc Natl Acad Sci U S A , 116 :7083 , 2019
Abstract :
PubMedSearch : Ma_2019_Proc.Natl.Acad.Sci.U.S.A_116_7083
PubMedID: 30890645

Title : Lycodine-type alkaloids from Lycopodiastrum casuarinoides and their cholinesterase inhibitory activities - Liu_2018_Fitoterapia_130_203
Author(s) : Liu Y , Xu PS , Ren Q , Chen X , Zhou G , Li D , Li XM , Xu KP , Yu X , Tan GS
Ref : Fitoterapia , 130 :203 , 2018
Abstract :
PubMedSearch : Liu_2018_Fitoterapia_130_203
PubMedID: 30213757

Title : Regulation of hippocampal long term depression by Neuroligin 1 - Dang_2018_Neuropharmacol_143_205
Author(s) : Dang R , Qi J , Liu A , Ren Q , Lv D , Han L , Zhou Z , Cao F , Xie W , Jia Z
Ref : Neuropharmacology , 143 :205 , 2018
Abstract :
PubMedSearch : Dang_2018_Neuropharmacol_143_205
PubMedID: 30266599

Title : Does time difference of the acetylcholinesterase (AChE) inhibition in different tissues exist? A case study of zebra fish (Danio rerio) exposed to cadmium chloride and deltamethrin - Zhang_2017_Chemosphere_168_908
Author(s) : Zhang T , Yang M , Pan H , Li S , Ren B , Ren Z , Xing N , Qi L , Ren Q , Xu S , Song J , Ma J
Ref : Chemosphere , 168 :908 , 2017
Abstract :
PubMedSearch : Zhang_2017_Chemosphere_168_908
PubMedID: 27825714

Title : The Role of AChE in Swimming Behavior of Daphnia magna: Correlation Analysis of Both Parameters Affected by Deltamethrin and Methomyl Exposure - Ren_2017_J.Toxicol_2017_3265727
Author(s) : Ren Q , Zhao R , Wang C , Li S , Zhang T , Ren Z , Yang M , Pan H , Xu S , Zhu J , Wang X
Ref : J Toxicol , 2017 :3265727 , 2017
Abstract :
PubMedSearch : Ren_2017_J.Toxicol_2017_3265727
PubMedID: 29201050
Gene_locus related to this paper: dapul-ACHE1

Title : Self-assembly of MPG1, a hydrophobin protein from the rice blast fungus that forms functional amyloid coatings, occurs by a surface-driven mechanism - Pham_2016_Sci.Rep_6_25288
Author(s) : Pham CL , Rey A , Lo V , Soules M , Ren Q , Meisl G , Knowles TP , Kwan AH , Sunde M
Ref : Sci Rep , 6 :25288 , 2016
Abstract :
PubMedSearch : Pham_2016_Sci.Rep_6_25288
PubMedID: 27142249

Title : Gene deficiency and pharmacological inhibition of soluble epoxide hydrolase confers resilience to repeated social defeat stress - Ren_2016_Proc.Natl.Acad.Sci.U.S.A_113_E1944
Author(s) : Ren Q , Ma M , Ishima T , Morisseau C , Yang J , Wagner KM , Zhang JC , Yang C , Yao W , Dong C , Han M , Hammock BD , Hashimoto K
Ref : Proc Natl Acad Sci U S A , 113 :E1944 , 2016
Abstract :
PubMedSearch : Ren_2016_Proc.Natl.Acad.Sci.U.S.A_113_E1944
PubMedID: 26976569
Gene_locus related to this paper: mouse-hyes

Title : The acetylcholinesterase (AChE) inhibition analysis of medaka (Oryzias latipes) in the exposure of three insecticides - Zhu_2015_Pak.J.Pharm.Sci_28_671
Author(s) : Zhu J , Huan C , Si G , Yang H , Yin L , Ren Q , Ren B , Fu R , Miao M , Ren Z
Ref : Pak J Pharm Sci , 28 :671 , 2015
Abstract :
PubMedSearch : Zhu_2015_Pak.J.Pharm.Sci_28_671
PubMedID: 25796143

Title : Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7 - Roy_2010_PLoS.One_5_e8842
Author(s) : Roy PH , Tetu SG , Larouche A , Elbourne L , Tremblay S , Ren Q , Dodson R , Harkins D , Shay R , Watkins K , Mahamoud Y , Paulsen IT
Ref : PLoS ONE , 5 :e8842 , 2010
Abstract :
PubMedSearch : Roy_2010_PLoS.One_5_e8842
PubMedID: 20107499
Gene_locus related to this paper: pseae-PA5384 , psea7-a6vca5 , psea7-a6v8b2 , psea7-a6v754

Title : The complete genome sequence of Haloferax volcanii DS2, a model archaeon - Hartman_2010_PLoS.One_5_e9605
Author(s) : Hartman AL , Norais C , Badger JH , Delmas S , Haldenby S , Madupu R , Robinson J , Khouri H , Ren Q , Lowe TM , Maupin-Furlow J , Pohlschroder M , Daniels C , Pfeiffer F , Allers T , Eisen JA
Ref : PLoS ONE , 5 :e9605 , 2010
Abstract :
PubMedSearch : Hartman_2010_PLoS.One_5_e9605
PubMedID: 20333302
Gene_locus related to this paper: halvd-d4gpd7 , halvd-d4gtr7 , halvd-d4gug3 , halvd-d4gug9 , halvd-d4gz20 , halvd-metxa

Title : Influence of growth stage on activities of polyhydroxyalkanoate (PHA) polymerase and PHA depolymerase in Pseudomonas putida U - Ren_2010_BMC.Microbiol_10_254
Author(s) : Ren Q , de Roo G , Witholt B , Zinn M , Thony-Meyer L
Ref : BMC Microbiol , 10 :254 , 2010
Abstract :
PubMedSearch : Ren_2010_BMC.Microbiol_10_254
PubMedID: 20937103

Title : The 2008 update of the Aspergillus nidulans genome annotation: a community effort - Wortman_2009_Fungal.Genet.Biol_46 Suppl 1_S2
Author(s) : Wortman JR , Gilsenan JM , Joardar V , Deegan J , Clutterbuck J , Andersen MR , Archer D , Bencina M , Braus G , Coutinho P , von Dohren H , Doonan J , Driessen AJ , Durek P , Espeso E , Fekete E , Flipphi M , Estrada CG , Geysens S , Goldman G , de Groot PW , Hansen K , Harris SD , Heinekamp T , Helmstaedt K , Henrissat B , Hofmann G , Homan T , Horio T , Horiuchi H , James S , Jones M , Karaffa L , Karanyi Z , Kato M , Keller N , Kelly DE , Kiel JA , Kim JM , van der Klei IJ , Klis FM , Kovalchuk A , Krasevec N , Kubicek CP , Liu B , Maccabe A , Meyer V , Mirabito P , Miskei M , Mos M , Mullins J , Nelson DR , Nielsen J , Oakley BR , Osmani SA , Pakula T , Paszewski A , Paulsen I , Pilsyk S , Pocsi I , Punt PJ , Ram AF , Ren Q , Robellet X , Robson G , Seiboth B , van Solingen P , Specht T , Sun J , Taheri-Talesh N , Takeshita N , Ussery D , vanKuyk PA , Visser H , van de Vondervoort PJ , de Vries RP , Walton J , Xiang X , Xiong Y , Zeng AP , Brandt BW , Cornell MJ , van den Hondel CA , Visser J , Oliver SG , Turner G
Ref : Fungal Genet Biol , 46 Suppl 1 :S2 , 2009
Abstract :
PubMedSearch : Wortman_2009_Fungal.Genet.Biol_46 Suppl 1_S2
PubMedID: 19146970
Gene_locus related to this paper: emeni-axe1 , emeni-c8v4m7 , emeni-faec , emeni-ppme1 , emeni-q5ara9 , emeni-q5arf0 , emeni-q5as30 , emeni-q5ase8 , emeni-q5av79 , emeni-q5aw09 , emeni-q5awc3 , emeni-q5awc7 , emeni-q5awu9 , emeni-q5aww4 , emeni-q5ax50 , emeni-q5ay37 , emeni-q5ay57 , emeni-q5ay59 , emeni-q5ayk9 , emeni-q5ays5 , emeni-q5az32 , emeni-q5az91 , emeni-q5az97 , emeni-q5azp1 , emeni-q5b0i6 , emeni-q5b1h2 , emeni-q5b2a9 , emeni-q5b2p7 , emeni-q5b3d2 , emeni-q5b4q7 , emeni-q5b5u7 , emeni-q5b5y4 , emeni-q5b9e7 , emeni-q5b9i0 , emeni-q5b364 , emeni-q5b446 , emeni-q5b938 , emeni-q5ba78 , emeni-q5bcd1 , emeni-q5bcd2 , emeni-q5bde7 , emeni-q5bdr0 , emeni-q5bf92 , emeni-q7si80 , emeni-q5bdv9 , emeni-c8vu15 , 9euro-a0a3d8t644 , emeni-q5b719 , emeni-q5ax97 , emeni-tdia , emeni-afoc , emeni-dbae

Title : Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils - Ward_2009_Appl.Environ.Microbiol_75_2046
Author(s) : Ward NL , Challacombe JF , Janssen PH , Henrissat B , Coutinho PM , Wu M , Xie G , Haft DH , Sait M , Badger J , Barabote RD , Bradley B , Brettin TS , Brinkac LM , Bruce D , Creasy T , Daugherty SC , Davidsen TM , DeBoy RT , Detter JC , Dodson RJ , Durkin AS , Ganapathy A , Gwinn-Giglio M , Han CS , Khouri H , Kiss H , Kothari SP , Madupu R , Nelson KE , Nelson WC , Paulsen I , Penn K , Ren Q , Rosovitz MJ , Selengut JD , Shrivastava S , Sullivan SA , Tapia R , Thompson LS , Watkins KL , Yang Q , Yu C , Zafar N , Zhou L , Kuske CR
Ref : Applied Environmental Microbiology , 75 :2046 , 2009
Abstract :
PubMedSearch : Ward_2009_Appl.Environ.Microbiol_75_2046
PubMedID: 19201974
Gene_locus related to this paper: korve-q1ihr9 , korve-q1ii02 , korve-q1iit0 , korve-q1ilk4 , korve-q1imj9 , korve-q1ims4 , korve-q1iqj0 , korve-q1isy7 , korve-q1itj5 , korve-q1itz6 , korve-q1ivc8 , acic5-c1f1u6 , acic5-c1f2i7 , acic5-c1f4m6 , acic5-c1f4y4 , acic5-c1f5a7 , acic5-c1f5u2 , acic5-c1f7a9 , acic5-c1f7x6 , acic5-c1f8y9 , acic5-c1f9m2 , acic5-c1f594 , acic5-c1f609 , acic5-c1f692 , acic5-c1f970 , acic5-c1fa52 , korve-q1iiw2 , korve-q1ivn9 , solue-q01nb0 , solue-q01qj6 , solue-q01r37 , solue-q01rq8 , solue-q01rz0 , solue-q01t44 , solue-q01t57 , solue-q01ts5 , solue-q01tv4 , solue-q01vd8 , solue-q01vr3 , solue-q01vw5 , solue-q01w12 , solue-q01wt9 , solue-q01y40 , solue-q01ym8 , solue-q01z24 , solue-q01z97 , solue-q01zl4 , solue-q01zm0 , solue-q01zm5 , solue-q01zm7 , solue-q02aa4 , solue-q02ab9 , solue-q02b72 , solue-q02bs8 , solue-q02bt7 , solue-q02cp0 , solue-q02d61 , solue-q020h3 , solue-q020i8 , solue-q021i6 , solue-q022b1 , solue-q022p8 , solue-q022q2 , solue-q022q3 , solue-q022x2 , solue-q022x5 , solue-q022x6 , solue-q022x8 , solue-q023e7 , solue-q024d9 , solue-q025c1 , solue-q026j1 , solue-q026k6 , solue-q026r6 , solue-q027p2 , solue-q027r8 , solue-q01zt5 , korve-q1itw6 , solue-q01yh7 , solue-q02ad6 , korve-q1imj6 , korve-q1iuf6 , acic5-c1f891 , solue-q026h7

Title : Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans - Haas_2009_Nature_461_393
Author(s) : Haas BJ , Kamoun S , Zody MC , Jiang RH , Handsaker RE , Cano LM , Grabherr M , Kodira CD , Raffaele S , Torto-Alalibo T , Bozkurt TO , Ah-Fong AM , Alvarado L , Anderson VL , Armstrong MR , Avrova A , Baxter L , Beynon J , Boevink PC , Bollmann SR , Bos JI , Bulone V , Cai G , Cakir C , Carrington JC , Chawner M , Conti L , Costanzo S , Ewan R , Fahlgren N , Fischbach MA , Fugelstad J , Gilroy EM , Gnerre S , Green PJ , Grenville-Briggs LJ , Griffith J , Grunwald NJ , Horn K , Horner NR , Hu CH , Huitema E , Jeong DH , Jones AM , Jones JD , Jones RW , Karlsson EK , Kunjeti SG , Lamour K , Liu Z , Ma L , Maclean D , Chibucos MC , McDonald H , McWalters J , Meijer HJ , Morgan W , Morris PF , Munro CA , O'Neill K , Ospina-Giraldo M , Pinzon A , Pritchard L , Ramsahoye B , Ren Q , Restrepo S , Roy S , Sadanandom A , Savidor A , Schornack S , Schwartz DC , Schumann UD , Schwessinger B , Seyer L , Sharpe T , Silvar C , Song J , Studholme DJ , Sykes S , Thines M , van de Vondervoort PJ , Phuntumart V , Wawra S , Weide R , Win J , Young C , Zhou S , Fry W , Meyers BC , van West P , Ristaino J , Govers F , Birch PR , Whisson SC , Judelson HS , Nusbaum C
Ref : Nature , 461 :393 , 2009
Abstract :
PubMedSearch : Haas_2009_Nature_461_393
PubMedID: 19741609
Gene_locus related to this paper: phyin-ENDO2 , phyin-q2m440 , phyin-q58g92 , phyit-d0mqp1 , phyit-d0mqp2 , phyit-d0mt75 , phyit-d0muv1 , phyit-d0mv34 , phyit-d0mv35 , phyit-d0mwf9 , phyit-d0mxu5 , phyit-d0n935 , phyit-d0nax9 , phyit-d0nfs3 , phyit-d0nhj2 , phyit-d0nhj4 , phyit-d0nhj8 , phyit-d0ni28 , phyit-d0nj14 , phyit-d0nj53 , phyit-d0nj54 , phyit-d0njf2 , phyit-d0nkm4 , phyit-d0nr53 , phyit-d0nrb1 , phyit-d0nrk9 , phyit-d0nrl4 , phyit-d0ns26 , phyit-d0ns42 , phyit-d0ns43 , phyit-d0nsr8 , phyit-d0nu41 , phyit-d0nvt3 , phyit-d0nwb6 , phyit-d0nwm8 , phyit-d0nzc0 , phyit-d0nzc1 , phyit-d0p0z1 , phyit-d0p3z2 , phyit-kex1 , phyit-d0n6q6 , phyit-d0n4i8 , phyit-d0mqf7 , phyit-d0n5g6

Title : Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum - Wu_2009_PLoS.One_4_e4207
Author(s) : Wu D , Raymond J , Wu M , Chatterji S , Ren Q , Graham JE , Bryant DA , Robb F , Colman A , Tallon LJ , Badger JH , Madupu R , Ward NL , Eisen JA
Ref : PLoS ONE , 4 :e4207 , 2009
Abstract :
PubMedSearch : Wu_2009_PLoS.One_4_e4207
PubMedID: 19148287
Gene_locus related to this paper: therp-b9kxz7 , therp-b9l2i8 , therp-b9l396

Title : Comparative genomics of the neglected human malaria parasite Plasmodium vivax - Carlton_2008_Nature_455_757
Author(s) : Carlton JM , Adams JH , Silva JC , Bidwell SL , Lorenzi H , Caler E , Crabtree J , Angiuoli SV , Merino EF , Amedeo P , Cheng Q , Coulson RM , Crabb BS , Del Portillo HA , Essien K , Feldblyum TV , Fernandez-Becerra C , Gilson PR , Gueye AH , Guo X , Kang'a S , Kooij TW , Korsinczky M , Meyer EV , Nene V , Paulsen I , White O , Ralph SA , Ren Q , Sargeant TJ , Salzberg SL , Stoeckert CJ , Sullivan SA , Yamamoto MM , Hoffman SL , Wortman JR , Gardner MJ , Galinski MR , Barnwell JW , Fraser-Liggett CM
Ref : Nature , 455 :757 , 2008
Abstract :
PubMedSearch : Carlton_2008_Nature_455_757
PubMedID: 18843361
Gene_locus related to this paper: plakh-b3lb44 , plavi-a5kcq0 , plavs-a5k2k6 , plavs-a5k3z4 , plavs-a5k4s6 , plavs-a5k5e4 , plavs-a5k7t5 , plavs-a5k686 , plavs-a5kaa1 , plavs-a5kaa3 , plavs-a5kas6 , plavs-a5kcm2

Title : Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice - Fouts_2008_PLoS.Genet_4_e1000141
Author(s) : Fouts DE , Tyler HL , DeBoy RT , Daugherty S , Ren Q , Badger JH , Durkin AS , Huot H , Shrivastava S , Kothari S , Dodson RJ , Mohamoud Y , Khouri H , Roesch LF , Krogfelt KA , Struve C , Triplett EW , Methe BA
Ref : PLoS Genet , 4 :e1000141 , 2008
Abstract :
PubMedSearch : Fouts_2008_PLoS.Genet_4_e1000141
PubMedID: 18654632
Gene_locus related to this paper: klep3-b5xp56 , klep3-b5xqp6 , klep3-b5xzn5 , klep3-b5xzy8 , klep3-bioh , klep3-menh , klep7-a6t8q2 , klep7-a6t9v6 , klep7-a6tb98 , klep7-mhpc , klep7-y243 , klep7-y1077 , klepn-c4x8q1 , klepn-w8uta0 , klep3-rutd

Title : Genome of the epsilonproteobacterial chemolithoautotroph Sulfurimonas denitrificans - Sievert_2008_Appl.Environ.Microbiol_74_1145
Author(s) : Sievert SM , Scott KM , Klotz MG , Chain PS , Hauser LJ , Hemp J , Hugler M , Land M , Lapidus A , Larimer FW , Lucas S , Malfatti SA , Meyer F , Paulsen IT , Ren Q , Simon J
Ref : Applied Environmental Microbiology , 74 :1145 , 2008
Abstract :
PubMedSearch : Sievert_2008_Appl.Environ.Microbiol_74_1145
PubMedID: 18065616
Gene_locus related to this paper: suldn-q30ua6 , suldn-q30rs9

Title : Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus - Myers_2007_Nat.Biotechnol_25_569
Author(s) : Myers GS , Parker D , Al-Hasani K , Kennan RM , Seemann T , Ren Q , Badger JH , Selengut JD , DeBoy RT , Tettelin H , Boyce JD , McCarl VP , Han X , Nelson WC , Madupu R , Mohamoud Y , Holley T , Fedorova N , Khouri H , Bottomley SP , Whittington RJ , Adler B , Songer JG , Rood JI , Paulsen IT
Ref : Nat Biotechnol , 25 :569 , 2007
Abstract :
PubMedSearch : Myers_2007_Nat.Biotechnol_25_569
PubMedID: 17468768
Gene_locus related to this paper: dicnv-a5evg0 , dicnv-a5ewn0 , dicnv-a5ewp3

Title : Genome sequence of Babesia bovis and comparative analysis of apicomplexan hemoprotozoa - Brayton_2007_PLoS.Pathog_3_1401
Author(s) : Brayton KA , Lau AO , Herndon DR , Hannick L , Kappmeyer LS , Berens SJ , Bidwell SL , Brown WC , Crabtree J , Fadrosh D , Feldblum T , Forberger HA , Haas BJ , Howell JM , Khouri H , Koo H , Mann DJ , Norimine J , Paulsen IT , Radune D , Ren Q , Smith RK, Jr. , Suarez CE , White O , Wortman JR , Knowles DP, Jr. , McElwain TF , Nene VM
Ref : PLoS Pathog , 3 :1401 , 2007
Abstract :
PubMedSearch : Brayton_2007_PLoS.Pathog_3_1401
PubMedID: 17953480
Gene_locus related to this paper: babbo-a7amu4 , babbo-a7as90 , babbo-a7au28 , babbo-a7avh4

Title : The Chlamydomonas genome reveals the evolution of key animal and plant functions - Merchant_2007_Science_318_245
Author(s) : Merchant SS , Prochnik SE , Vallon O , Harris EH , Karpowicz SJ , Witman GB , Terry A , Salamov A , Fritz-Laylin LK , Marechal-Drouard L , Marshall WF , Qu LH , Nelson DR , Sanderfoot AA , Spalding MH , Kapitonov VV , Ren Q , Ferris P , Lindquist E , Shapiro H , Lucas SM , Grimwood J , Schmutz J , Cardol P , Cerutti H , Chanfreau G , Chen CL , Cognat V , Croft MT , Dent R , Dutcher S , Fernandez E , Fukuzawa H , Gonzalez-Ballester D , Gonzalez-Halphen D , Hallmann A , Hanikenne M , Hippler M , Inwood W , Jabbari K , Kalanon M , Kuras R , Lefebvre PA , Lemaire SD , Lobanov AV , Lohr M , Manuell A , Meier I , Mets L , Mittag M , Mittelmeier T , Moroney JV , Moseley J , Napoli C , Nedelcu AM , Niyogi K , Novoselov SV , Paulsen IT , Pazour G , Purton S , Ral JP , Riano-Pachon DM , Riekhof W , Rymarquis L , Schroda M , Stern D , Umen J , Willows R , Wilson N , Zimmer SL , Allmer J , Balk J , Bisova K , Chen CJ , Elias M , Gendler K , Hauser C , Lamb MR , Ledford H , Long JC , Minagawa J , Page MD , Pan J , Pootakham W , Roje S , Rose A , Stahlberg E , Terauchi AM , Yang P , Ball S , Bowler C , Dieckmann CL , Gladyshev VN , Green P , Jorgensen R , Mayfield S , Mueller-Roeber B , Rajamani S , Sayre RT , Brokstein P , Dubchak I , Goodstein D , Hornick L , Huang YW , Jhaveri J , Luo Y , Martinez D , Ngau WC , Otillar B , Poliakov A , Porter A , Szajkowski L , Werner G , Zhou K , Grigoriev IV , Rokhsar DS , Grossman AR
Ref : Science , 318 :245 , 2007
Abstract :
PubMedSearch : Merchant_2007_Science_318_245
PubMedID: 17932292
Gene_locus related to this paper: chlre-a0a2k3e2k6 , chlre-a8hmd4 , chlre-a8hqa9 , chlre-a8htq0 , chlre-a8hus6.1 , chlre-a8hus6.2 , chlre-a8icg4 , chlre-a8iwm0 , chlre-a8ize5 , chlre-a8j2s9 , chlre-a8j5w6 , chlre-a8j7f8 , chlre-a8j8u9 , chlre-a8j8v0 , chlre-a8j9u6 , chlre-a8j143 , chlre-a8j248 , chlre-a8jd32 , chlre-a8jd42 , chlre-a8jgj2 , chlre-a8jhc8 , chlre-a8jhe5 , chlre-a8iwj1 , chlre-a8j7d5 , chlre-a0a2k3dii0

Title : Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis - Carlton_2007_Science_315_207
Author(s) : Carlton JM , Hirt RP , Silva JC , Delcher AL , Schatz M , Zhao Q , Wortman JR , Bidwell SL , Alsmark UC , Besteiro S , Sicheritz-Ponten T , Noel CJ , Dacks JB , Foster PG , Simillion C , Van de Peer Y , Miranda-Saavedra D , Barton GJ , Westrop GD , Muller S , Dessi D , Fiori PL , Ren Q , Paulsen I , Zhang H , Bastida-Corcuera FD , Simoes-Barbosa A , Brown MT , Hayes RD , Mukherjee M , Okumura CY , Schneider R , Smith AJ , Vanacova S , Villalvazo M , Haas BJ , Pertea M , Feldblyum TV , Utterback TR , Shu CL , Osoegawa K , de Jong PJ , Hrdy I , Horvathova L , Zubacova Z , Dolezal P , Malik SB , Logsdon JM, Jr. , Henze K , Gupta A , Wang CC , Dunne RL , Upcroft JA , Upcroft P , White O , Salzberg SL , Tang P , Chiu CH , Lee YS , Embley TM , Coombs GH , Mottram JC , Tachezy J , Fraser-Liggett CM , Johnson PJ
Ref : Science , 315 :207 , 2007
Abstract :
PubMedSearch : Carlton_2007_Science_315_207
PubMedID: 17218520
Gene_locus related to this paper: triva-a2d7i4 , triva-a2d9w5 , triva-a2d766 , triva-a2dah5 , triva-a2dlx9 , triva-a2dul1 , triva-a2dy49 , triva-a2e6h5 , triva-a2e7p9 , triva-a2e9l3 , triva-a2e414 , triva-a2e613 , triva-a2e983 , triva-a2eau8 , triva-a2ekb9 , triva-a2en58 , triva-a2erp5 , triva-a2et59 , triva-a2f7u4 , triva-a2f801 , triva-a2fa76 , triva-a2fbq3 , triva-a2fe47 , triva-a2fgl0 , triva-a2fhp7 , triva-a2fie6 , triva-a2fk22 , triva-a2fla2 , triva-a2fqm0 , triva-a2fqq2 , triva-a2frq0 , triva-a2frr3 , triva-a2fsq9 , triva-a2fsz5 , triva-a2fux4 , triva-a2fz57 , triva-a2g2h0 , triva-a2g9x0 , triva-a2fqi4

Title : Draft genome of the filarial nematode parasite Brugia malayi - Ghedin_2007_Science_317_1756
Author(s) : Ghedin E , Wang S , Spiro D , Caler E , Zhao Q , Crabtree J , Allen JE , Delcher AL , Guiliano DB , Miranda-Saavedra D , Angiuoli SV , Creasy T , Amedeo P , Haas B , El-Sayed NM , Wortman JR , Feldblyum T , Tallon L , Schatz M , Shumway M , Koo H , Salzberg SL , Schobel S , Pertea M , Pop M , White O , Barton GJ , Carlow CK , Crawford MJ , Daub J , Dimmic MW , Estes CF , Foster JM , Ganatra M , Gregory WF , Johnson NM , Jin J , Komuniecki R , Korf I , Kumar S , Laney S , Li BW , Li W , Lindblom TH , Lustigman S , Ma D , Maina CV , Martin DM , McCarter JP , McReynolds L , Mitreva M , Nutman TB , Parkinson J , Peregrin-Alvarez JM , Poole C , Ren Q , Saunders L , Sluder AE , Smith K , Stanke M , Unnasch TR , Ware J , Wei AD , Weil G , Williams DJ , Zhang Y , Williams SA , Fraser-Liggett C , Slatko B , Blaxter ML , Scott AL
Ref : Science , 317 :1756 , 2007
Abstract :
PubMedSearch : Ghedin_2007_Science_317_1756
PubMedID: 17885136
Gene_locus related to this paper: bruma-a8ndk6 , bruma-a8njt8 , bruma-a8nl88 , bruma-a8npi4 , bruma-a8npi6 , bruma-a8p6g9 , bruma-a8pah3 , bruma-a8pc38 , bruma-a8pek5 , bruma-a8piq4 , bruma-a8pnw8 , bruma-a8psu4 , bruma-a8pte1 , bruma-a8q606 , bruma-a8q632 , bruma-a8q937 , bruma-a8qav5 , bruma-a8qbd9 , bruma-a8qgj6 , bruma-a8qh78 , bruma-a8q143 , bruma-a0a024mej5 , bruma-a0a0k0jju9 , bruma-a0a0i9n517

Title : The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation - Palenik_2007_Proc.Natl.Acad.Sci.U.S.A_104_7705
Author(s) : Palenik B , Grimwood J , Aerts A , Rouze P , Salamov A , Putnam N , Dupont C , Jorgensen R , Derelle E , Rombauts S , Zhou K , Otillar R , Merchant SS , Podell S , Gaasterland T , Napoli C , Gendler K , Manuell A , Tai V , Vallon O , Piganeau G , Jancek S , Heijde M , Jabbari K , Bowler C , Lohr M , Robbens S , Werner G , Dubchak I , Pazour GJ , Ren Q , Paulsen I , Delwiche C , Schmutz J , Rokhsar D , Van de Peer Y , Moreau H , Grigoriev IV
Ref : Proc Natl Acad Sci U S A , 104 :7705 , 2007
Abstract :
PubMedSearch : Palenik_2007_Proc.Natl.Acad.Sci.U.S.A_104_7705
PubMedID: 17460045
Gene_locus related to this paper: ostlu-a4rrl5 , ostlu-a4ruh2 , ostlu-a4rut7 , ostlu-a4ruy3 , ostlu-a4rxn1 , ostlu-a4ry37 , ostlu-a4s2e6 , ostlu-a4s2y4 , ostlu-a4s3d7 , ostlu-a4s4v4 , ostlu-a4s5e4 , ostlu-a4s5y6 , ostlu-a4s7a8 , ostlu-a4s7z5 , ostlu-a4s8g3 , ostlu-a4s8n8 , ostlu-a4s8s1 , ostlu-a4s958 , ostlu-a4sac2 , ostlu-a4saz3 , ostlu-a4sbb7 , ostlu-a4s6q5 , ostlu-a4s1q9 , ostlu-a4s8b2 , ostlu-a4s262

Title : Genome sequence of Aedes aegypti, a major arbovirus vector - Nene_2007_Science_316_1718
Author(s) : Nene V , Wortman JR , Lawson D , Haas B , Kodira C , Tu ZJ , Loftus B , Xi Z , Megy K , Grabherr M , Ren Q , Zdobnov EM , Lobo NF , Campbell KS , Brown SE , Bonaldo MF , Zhu J , Sinkins SP , Hogenkamp DG , Amedeo P , Arensburger P , Atkinson PW , Bidwell S , Biedler J , Birney E , Bruggner RV , Costas J , Coy MR , Crabtree J , Crawford M , Debruyn B , Decaprio D , Eiglmeier K , Eisenstadt E , El-Dorry H , Gelbart WM , Gomes SL , Hammond M , Hannick LI , Hogan JR , Holmes MH , Jaffe D , Johnston JS , Kennedy RC , Koo H , Kravitz S , Kriventseva EV , Kulp D , LaButti K , Lee E , Li S , Lovin DD , Mao C , Mauceli E , Menck CF , Miller JR , Montgomery P , Mori A , Nascimento AL , Naveira HF , Nusbaum C , O'Leary S , Orvis J , Pertea M , Quesneville H , Reidenbach KR , Rogers YH , Roth CW , Schneider JR , Schatz M , Shumway M , Stanke M , Stinson EO , Tubio JM , Vanzee JP , Verjovski-Almeida S , Werner D , White O , Wyder S , Zeng Q , Zhao Q , Zhao Y , Hill CA , Raikhel AS , Soares MB , Knudson DL , Lee NH , Galagan J , Salzberg SL , Paulsen IT , Dimopoulos G , Collins FH , Birren B , Fraser-Liggett CM , Severson DW
Ref : Science , 316 :1718 , 2007
Abstract :
PubMedSearch : Nene_2007_Science_316_1718
PubMedID: 17510324
Gene_locus related to this paper: aedae-ACHE , aedae-ACHE1 , aedae-glita , aedae-q0iea6 , aedae-q0iev6 , aedae-q0ifn6 , aedae-q0ifn8 , aedae-q0ifn9 , aedae-q0ifp0 , aedae-q0ig41 , aedae-q1dgl0 , aedae-q1dh03 , aedae-q1dh19 , aedae-q1hqe6 , aedae-Q8ITU8 , aedae-Q8MMJ6 , aedae-Q8T9V6 , aedae-q16e91 , aedae-q16f04 , aedae-q16f25 , aedae-q16f26 , aedae-q16f28 , aedae-q16f29 , aedae-q16f30 , aedae-q16gq5 , aedae-q16iq5 , aedae-q16je0 , aedae-q16je1 , aedae-q16je2 , aedae-q16ks8 , aedae-q16lf2 , aedae-q16lv6 , aedae-q16m61 , aedae-q16mc1 , aedae-q16mc6 , aedae-q16mc7 , aedae-q16md1 , aedae-q16ms7 , aedae-q16nk5 , aedae-q16rl5 , aedae-q16rz9 , aedae-q16si8 , aedae-q16t49 , aedae-q16wf1 , aedae-q16x18 , aedae-q16xp8 , aedae-q16xu6 , aedae-q16xw5 , aedae-q16xw6 , aedae-q16y04 , aedae-q16y05 , aedae-q16y06 , aedae-q16y07 , aedae-q16y39 , aedae-q16y40 , aedae-q16yg4 , aedae-q16z03 , aedae-q17aa7 , aedae-q17av1 , aedae-q17av2 , aedae-q17av3 , aedae-q17av4 , aedae-q17b28 , aedae-q17b29 , aedae-q17b30 , aedae-q17b31 , aedae-q17b32 , aedae-q17bm3 , aedae-q17bm4 , aedae-q17bv7 , aedae-q17c44 , aedae-q17cz1 , aedae-q17d32 , aedae-q17g39 , aedae-q17g40 , aedae-q17g41 , aedae-q17g42 , aedae-q17g43 , aedae-q17g44 , aedae-q17gb8 , aedae-q17gr3 , aedae-q17if7 , aedae-q17if9 , aedae-q17ig1 , aedae-q17ig2 , aedae-q17is4 , aedae-q17l09 , aedae-q17m26 , aedae-q17mg9 , aedae-q17mv4 , aedae-q17mv5 , aedae-q17mv6 , aedae-q17mv7 , aedae-q17mw8 , aedae-q17mw9 , aedae-q17nw5 , aedae-q17nx5 , aedae-q17pa4 , aedae-q17q69 , aedae-q170k7 , aedae-q171y4 , aedae-q172e0 , aedae-q176i8 , aedae-q176j0 , aedae-q177k1 , aedae-q177k2 , aedae-q177l9 , aedae-j9hic3 , aedae-q179r9 , aedae-u483 , aedae-j9hj23 , aedae-q17d68 , aedae-q177c7 , aedae-q0ifp1 , aedae-a0a1s4fx83 , aedae-a0a1s4g2m0 , aedae-q1hr49

Title : Comparative genomics of emerging human ehrlichiosis agents - Dunning Hotopp_2006_PLoS.Genet_2_e21
Author(s) : Dunning Hotopp JC , Lin M , Madupu R , Crabtree J , Angiuoli SV , Eisen JA , Seshadri R , Ren Q , Wu M , Utterback TR , Smith S , Lewis M , Khouri H , Zhang C , Niu H , Lin Q , Ohashi N , Zhi N , Nelson W , Brinkac LM , Dodson RJ , Rosovitz MJ , Sundaram J , Daugherty SC , Davidsen T , Durkin AS , Gwinn M , Haft DH , Selengut JD , Sullivan SA , Zafar N , Zhou L , Benahmed F , Forberger H , Halpin R , Mulligan S , Robinson J , White O , Rikihisa Y , Tettelin H
Ref : PLoS Genet , 2 :e21 , 2006
Abstract :
PubMedSearch : Dunning Hotopp_2006_PLoS.Genet_2_e21
PubMedID: 16482227
Gene_locus related to this paper: anapz-q2gj80 , anapz-q2gle9 , anapz-q2glf0 , anapz-q2gln7 , ehrch-q40iu0 , ehrch-q40jj7 , ehrcr-q2gfq9 , neosm-q2gcq8 , neosm-q2gdf2 , neosm-q2gcn8 , anapz-q2gk48 , ehrcr-q2ggj6

Title : Skewed genomic variability in strains of the toxigenic bacterial pathogen, Clostridium perfringens - Myers_2006_Genome.Res_16_1031
Author(s) : Myers GS , Rasko DA , Cheung JK , Ravel J , Seshadri R , DeBoy RT , Ren Q , Varga J , Awad MM , Brinkac LM , Daugherty SC , Haft DH , Dodson RJ , Madupu R , Nelson WC , Rosovitz MJ , Sullivan SA , Khouri H , Dimitrov GI , Watkins KL , Mulligan S , Benton J , Radune D , Fisher DJ , Atkins HS , Hiscox T , Jost BH , Billington SJ , Songer JG , McClane BA , Titball RW , Rood JI , Melville SB , Paulsen IT
Ref : Genome Res , 16 :1031 , 2006
Abstract :
PubMedSearch : Myers_2006_Genome.Res_16_1031
PubMedID: 16825665
Gene_locus related to this paper: clope-CPE0307 , clope-CPE0432 , clope-CPE1581 , clope-CPE1596 , clope-CPE1989 , clope-CPE2231 , clope-lipa , clope-LIPB , clope-PLDB

Title : Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus - Badger_2006_J.Bacteriol_188_6841
Author(s) : Badger JH , Hoover TR , Brun YV , Weiner RM , Laub MT , Alexandre G , Mrazek J , Ren Q , Paulsen IT , Nelson KE , Khouri HM , Radune D , Sosa J , Dodson RJ , Sullivan SA , Rosovitz MJ , Madupu R , Brinkac LM , Durkin AS , Daugherty SC , Kothari SP , Giglio MG , Zhou L , Haft DH , Selengut JD , Davidsen TM , Yang Q , Zafar N , Ward NL
Ref : Journal of Bacteriology , 188 :6841 , 2006
Abstract :
PubMedSearch : Badger_2006_J.Bacteriol_188_6841
PubMedID: 16980487
Gene_locus related to this paper: hypna-q0bwt8 , hypna-q0bwv5 , hypna-q0bww7 , hypna-q0bxb2 , hypna-q0bxr5 , hypna-q0by84 , hypna-q0byl3 , hypna-q0bz23 , hypna-q0bzi5 , hypna-q0c0f7 , hypna-q0c0f8 , hypna-q0c2v8 , hypna-q0c2w1 , hypna-q0c2w4 , hypna-q0c3g0 , hypna-q0c4j0 , hypna-q0c4n1 , hypna-q0c4q9 , hypna-q0c4v5 , hypna-q0c386 , hypna-q0c539 , hypna-q0c611

Title : The genome of deep-sea vent chemolithoautotroph Thiomicrospira crunogena XCL-2 - Scott_2006_PLoS.Biol_4_e383
Author(s) : Scott KM , Sievert SM , Abril FN , Ball LA , Barrett CJ , Blake RA , Boller AJ , Chain PS , Clark JA , Davis CR , Detter C , Do KF , Dobrinski KP , Faza BI , Fitzpatrick KA , Freyermuth SK , Harmer TL , Hauser LJ , Hugler M , Kerfeld CA , Klotz MG , Kong WW , Land M , Lapidus A , Larimer FW , Longo DL , Lucas S , Malfatti SA , Massey SE , Martin DD , McCuddin Z , Meyer F , Moore JL , Ocampo LH, Jr. , Paul JH , Paulsen IT , Reep DK , Ren Q , Ross RL , Sato PY , Thomas P , Tinkham LE , Zeruth GT
Ref : PLoS Biol , 4 :e383 , 2006
Abstract :
PubMedSearch : Scott_2006_PLoS.Biol_4_e383
PubMedID: 17105352
Gene_locus related to this paper: thicr-q31fm2 , thicr-q31ih5

Title : Genome sequence of Aeromonas hydrophila ATCC 7966T: jack of all trades - Seshadri_2006_J.Bacteriol_188_8272
Author(s) : Seshadri R , Joseph SW , Chopra AK , Sha J , Shaw J , Graf J , Haft D , Wu M , Ren Q , Rosovitz MJ , Madupu R , Tallon L , Kim M , Jin S , Vuong H , Stine OC , Ali A , Horneman AJ , Heidelberg JF
Ref : Journal of Bacteriology , 188 :8272 , 2006
Abstract :
PubMedSearch : Seshadri_2006_J.Bacteriol_188_8272
PubMedID: 16980456
Gene_locus related to this paper: aerhh-a0kes5 , aerhh-a0keu7 , aerhh-a0kf11 , aerhh-a0kfl9 , aerhh-a0kfn7 , aerhh-a0kgz2 , aerhh-a0khk1 , aerhh-a0kin3 , aerhh-a0kiv7 , aerhh-a0kkc6 , aerhh-a0kkj8 , aerhh-a0klc3 , aerhh-a0kme3 , aerhh-a0knr1 , aerhh-a0knu8 , aerhh-a0kp50 , aerhh-a0kpk1 , aerhh-a0kr22 , aerhy-PHAC , aerpu-PEP , aerhh-a0khd8 , aerhh-a0kle4 , aerhy-a0a028v5g9

Title : Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment - Palenik_2006_Proc.Natl.Acad.Sci.U.S.A_103_13555
Author(s) : Palenik B , Ren Q , Dupont CL , Myers GS , Heidelberg JF , Badger JH , Madupu R , Nelson WC , Brinkac LM , Dodson RJ , Durkin AS , Daugherty SC , Sullivan SA , Khouri H , Mohamoud Y , Halpin R , Paulsen IT
Ref : Proc Natl Acad Sci U S A , 103 :13555 , 2006
Abstract :
PubMedSearch : Palenik_2006_Proc.Natl.Acad.Sci.U.S.A_103_13555
PubMedID: 16938853
Gene_locus related to this paper: syns3-q0i8r7 , syns3-q0i9w2 , syns3-q0i996 , syns3-q0ia13 , syns3-q0ia55 , syns3-q0ib73 , syns3-q0ibm2 , syns3-q0ibp1 , syns3-q0iby1 , syns9-q3ax89 , syns3-q0ibv4

Title : Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote - Eisen_2006_PLoS.Biol_4_e286
Author(s) : Eisen JA , Coyne RS , Wu M , Wu D , Thiagarajan M , Wortman JR , Badger JH , Ren Q , Amedeo P , Jones KM , Tallon LJ , Delcher AL , Salzberg SL , Silva JC , Haas BJ , Majoros WH , Farzad M , Carlton JM , Smith RK, Jr. , Garg J , Pearlman RE , Karrer KM , Sun L , Manning G , Elde NC , Turkewitz AP , Asai DJ , Wilkes DE , Wang Y , Cai H , Collins K , Stewart BA , Lee SR , Wilamowska K , Weinberg Z , Ruzzo WL , Wloga D , Gaertig J , Frankel J , Tsao CC , Gorovsky MA , Keeling PJ , Waller RF , Patron NJ , Cherry JM , Stover NA , Krieger CJ , del Toro C , Ryder HF , Williamson SC , Barbeau RA , Hamilton EP , Orias E
Ref : PLoS Biol , 4 :e286 , 2006
Abstract :
PubMedSearch : Eisen_2006_PLoS.Biol_4_e286
PubMedID: 16933976
Gene_locus related to this paper: tetts-i7mam3 , tetts-i7ml33

Title : Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5 - Paulsen_2005_Nat.Biotechnol_23_873
Author(s) : Paulsen IT , Press CM , Ravel J , Kobayashi DY , Myers GS , Mavrodi DV , DeBoy RT , Seshadri R , Ren Q , Madupu R , Dodson RJ , Durkin AS , Brinkac LM , Daugherty SC , Sullivan SA , Rosovitz MJ , Gwinn ML , Zhou L , Schneider DJ , Cartinhour SW , Nelson WC , Weidman J , Watkins K , Tran K , Khouri H , Pierson EA , Pierson LS, 3rd , Thomashow LS , Loper JE
Ref : Nat Biotechnol , 23 :873 , 2005
Abstract :
PubMedSearch : Paulsen_2005_Nat.Biotechnol_23_873
PubMedID: 15980861
Gene_locus related to this paper: psef5-metx , psef5-q4k3c9 , psef5-q4k4b4 , psef5-q4k4t4 , psef5-q4k4u7 , psef5-q4k4y2 , psef5-q4k5b5 , psef5-q4k5k6 , psef5-q4k5w4 , psef5-q4k6z9 , psef5-q4k7i6 , psef5-q4k7u9 , psef5-q4k8j2 , psef5-q4k9i3 , psef5-q4k458 , psef5-q4k713 , psef5-q4k717 , psef5-q4k873 , psef5-q4k906 , psef5-q4k982 , psef5-q4k989 , psef5-q4k993 , psef5-q4kax4 , psef5-q4kay8 , psef5-q4kaz0 , psef5-q4kaz4 , psef5-q4kb21 , psef5-q4kbd7 , psef5-q4kbs3 , psef5-q4kbs6 , psef5-q4kc18 , psef5-q4kc21 , psef5-q4kcd3 , psef5-q4kch8 , psef5-q4kcj3 , psef5-q4kck4 , psef5-q4kcn8 , psef5-q4kcq2 , psef5-q4kcx3 , psef5-q4kd54 , psef5-q4kda1 , psef5-q4kdb4 , psef5-q4ke18 , psef5-q4keh1 , psef5-q4kej0 , psef5-q4keq4 , psef5-q4kes9 , psef5-q4kf14 , psef5-q4kfj4 , psef5-q4kfw0 , psef5-q4kfw1 , psef5-q4kfx7 , psef5-q4kgg3 , psef5-q4kgj9 , psef5-q4kgs6 , psef5-q4kh30 , psef5-q4kha2 , psef5-q4khf1 , psef5-q4khl0 , psef5-q4khv5 , psef5-q4ki42 , psef5-q4kj24 , psef5-q4kj95 , psef5-q4kjk5 , psef5-q4kjk7 , psef5-q4kjm8 , psef5-q4kjt7 , psef5-q4kk20 , psef5-q4kk22 , psef5-q4kk59 , psef5-q4kkf7 , psefl-PLTG , psepf-PHAZ , psef5-q4kfd8

Title : Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901 - Wu_2005_PLoS.Genet_1_e65
Author(s) : Wu M , Ren Q , Durkin AS , Daugherty SC , Brinkac LM , Dodson RJ , Madupu R , Sullivan SA , Kolonay JF , Haft DH , Nelson WC , Tallon LJ , Jones KM , Ulrich LE , Gonzalez JM , Zhulin IB , Robb FT , Eisen JA
Ref : PLoS Genet , 1 :e65 , 2005
Abstract :
PubMedSearch : Wu_2005_PLoS.Genet_1_e65
PubMedID: 16311624
Gene_locus related to this paper: carhz-metx , carhz-q3abd5 , carhz-q3adp4

Title : Genome sequence of Theileria parva, a bovine pathogen that transforms lymphocytes - Gardner_2005_Science_309_134
Author(s) : Gardner MJ , Bishop R , Shah T , de Villiers EP , Carlton JM , Hall N , Ren Q , Paulsen IT , Pain A , Berriman M , Wilson RJ , Sato S , Ralph SA , Mann DJ , Xiong Z , Shallom SJ , Weidman J , Jiang L , Lynn J , Weaver B , Shoaibi A , Domingo AR , Wasawo D , Crabtree J , Wortman JR , Haas B , Angiuoli SV , Creasy TH , Lu C , Suh B , Silva JC , Utterback TR , Feldblyum TV , Pertea M , Allen J , Nierman WC , Taracha EL , Salzberg SL , White OR , Fitzhugh HA , Morzaria S , Venter JC , Fraser CM , Nene V
Ref : Science , 309 :134 , 2005
Abstract :
PubMedSearch : Gardner_2005_Science_309_134
PubMedID: 15994558
Gene_locus related to this paper: thepa-q4mzr2 , thepa-q4n0b4 , thepa-q4n2i4 , thepa-q4n4i8 , thepa-q4n5d6 , thepa-q4n5m4 , thepa-q4n006 , thepa-q4n9g7 , thepa-q4n315 , thepa-q4n349 , thepa-q4n803

Title : Genome sequence of Silicibacter pomeroyi reveals adaptations to the marine environment - Moran_2004_Nature_432_910
Author(s) : Moran MA , Buchan A , Gonzalez JM , Heidelberg JF , Whitman WB , Kiene RP , Henriksen JR , King GM , Belas R , Fuqua C , Brinkac L , Lewis M , Johri S , Weaver B , Pai G , Eisen JA , Rahe E , Sheldon WM , Ye W , Miller TR , Carlton J , Rasko DA , Paulsen IT , Ren Q , Daugherty SC , DeBoy RT , Dodson RJ , Durkin AS , Madupu R , Nelson WC , Sullivan SA , Rosovitz MJ , Haft DH , Selengut J , Ward N
Ref : Nature , 432 :910 , 2004
Abstract :
PubMedSearch : Moran_2004_Nature_432_910
PubMedID: 15602564
Gene_locus related to this paper: silpo-q5lke5 , silpo-q5lke7 , silpo-q5lke8 , silpo-q5lkk5 , silpo-q5lkv2 , silpo-q5lln9 , silpo-q5llu0 , silpo-q5llu2 , silpo-q5llx5 , silpo-q5lm66 , silpo-q5lmb9 , silpo-q5lml9 , silpo-q5lnp6 , silpo-q5lp28 , silpo-q5lp48 , silpo-q5lp56 , silpo-q5lpa5 , silpo-q5lpf7 , silpo-q5lpy6 , silpo-q5lrk1 , silpo-q5lsn7 , silpo-q5ltb5 , silpo-q5ltk0 , silpo-q5ltm5 , silpo-q5ltw8 , silpo-q5ltw9 , silpo-q5ltx1 , silpo-q5ltx5 , silpo-q5lu02 , silpo-q5lv12 , silpo-q5lv17 , silpo-q5lv53 , silpo-q5lvg9 , silpo-q5lw35 , silpo-q5lwk9 , silpo-q5lws0

Title : Genomic insights into methanotrophy: the complete genome sequence of Methylococcus capsulatus (Bath) - Ward_2004_PLoS.Biol_2_e303
Author(s) : Ward N , Larsen O , Sakwa J , Bruseth L , Khouri H , Durkin AS , Dimitrov G , Jiang L , Scanlan D , Kang KH , Lewis M , Nelson KE , Methe B , Wu M , Heidelberg JF , Paulsen IT , Fouts D , Ravel J , Tettelin H , Ren Q , Read T , DeBoy RT , Seshadri R , Salzberg SL , Jensen HB , Birkeland NK , Nelson WC , Dodson RJ , Grindhaug SH , Holt I , Eidhammer I , Jonasen I , Vanaken S , Utterback T , Feldblyum TV , Fraser CM , Lillehaug JR , Eisen JA
Ref : PLoS Biol , 2 :e303 , 2004
Abstract :
PubMedSearch : Ward_2004_PLoS.Biol_2_e303
PubMedID: 15383840
Gene_locus related to this paper: metca-q60a38 , metca-q60bu6 , metca-q60cn0 , metca-q605j8 , metca-q606x9 , metca-q607f7 , metca-q607m2 , metca-q609v0

Title : Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes - Seshadri_2004_Proc.Natl.Acad.Sci.U.S.A_101_5646
Author(s) : Seshadri R , Myers GS , Tettelin H , Eisen JA , Heidelberg JF , Dodson RJ , Davidsen TM , DeBoy RT , Fouts DE , Haft DH , Selengut J , Ren Q , Brinkac LM , Madupu R , Kolonay J , Durkin SA , Daugherty SC , Shetty J , Shvartsbeyn A , Gebregeorgis E , Geer K , Tsegaye G , Malek J , Ayodeji B , Shatsman S , McLeod MP , Smajs D , Howell JK , Pal S , Amin A , Vashisth P , McNeill TZ , Xiang Q , Sodergren E , Baca E , Weinstock GM , Norris SJ , Fraser CM , Paulsen IT
Ref : Proc Natl Acad Sci U S A , 101 :5646 , 2004
Abstract :
PubMedSearch : Seshadri_2004_Proc.Natl.Acad.Sci.U.S.A_101_5646
PubMedID: 15064399
Gene_locus related to this paper: trede-q73j01 , trede-q73kf5 , trede-q73kp3 , trede-q73ks1 , trede-q73nf8 , trede-q73qt5 , trede-q73qv0 , trede-q73ra4 , trede-q73ri8 , trede-Q93EK3 , trede-TDE0521

Title : Complete genome sequence of an M1 strain of Streptococcus pyogenes - Ferretti_2001_Proc.Natl.Acad.Sci.U.S.A_98_4658
Author(s) : Ferretti JJ , McShan WM , Ajdic D , Savic DJ , Savic G , Lyon K , Primeaux C , Sezate S , Suvorov AN , Kenton S , Lai HS , Lin SP , Qian Y , Jia HG , Najar FZ , Ren Q , Zhu H , Song L , White J , Yuan X , Clifton SW , Roe BA , McLaughlin R
Ref : Proc Natl Acad Sci U S A , 98 :4658 , 2001
Abstract :
PubMedSearch : Ferretti_2001_Proc.Natl.Acad.Sci.U.S.A_98_4658
PubMedID: 11296296
Gene_locus related to this paper: strpy-ESTA , strpy-PEPXP , strpy-Q8K5W4 , strpy-SPY1308 , strpy-SPYM18.1727

Title : The DNA sequence of human chromosome 22 - Dunham_1999_Nature_402_489
Author(s) : Dunham I , Hunt AR , Collins JE , Bruskiewich R , Beare DM , Clamp M , Smink LJ , Ainscough R , Almeida JP , Babbage AK , Bagguley C , Bailey J , Barlow KF , Bates KN , Beasley OP , Bird CP , Blakey SE , Bridgeman AM , Buck D , Burgess J , Burrill WD , Burton J , Carder C , Carter NP , Chen Y , Clark G , Clegg SM , Cobley VE , Cole CG , Collier RE , Connor R , Conroy D , Corby NR , Coville GJ , Cox AV , Davis J , Dawson E , Dhami PD , Dockree C , Dodsworth SJ , Durbin RM , Ellington AG , Evans KL , Fey JM , Fleming K , French L , Garner AA , Gilbert JGR , Goward ME , Grafham DV , Griffiths MND , Hall C , Hall RE , Hall-Tamlyn G , Heathcott RW , Ho S , Holmes S , Hunt SE , Jones MC , Kershaw J , Kimberley AM , King A , Laird GK , Langford CF , Leversha MA , Lloyd C , Lloyd DM , Martyn ID , Mashreghi-Mohammadi M , Matthews LH , Mccann OT , Mcclay J , Mclaren S , McMurray AA , Milne SA , Mortimore BJ , Odell CN , Pavitt R , Pearce AV , Pearson D , Phillimore BJCT , Phillips SH , Plumb RW , Ramsay H , Ramsey Y , Rogers L , Ross MT , Scott CE , Sehra HK , Skuce CD , Smalley S , Smith ML , Soderlund C , Spragon L , Steward CA , Sulston JE , Swann RM , Vaudin M , Wall M , Wallis JM , Whiteley MN , Willey DL , Williams L , Williams SA , Williamson H , Wilmer TE , Wilming L , Wright CL , Hubbard T , Bentley DR , Beck S , Rogers J , Shimizu N , Minoshima S , Kawasaki K , Sasaki T , Asakawa S , Kudoh J , Shintani A , Shibuya K , Yoshizaki Y , Aoki N , Mitsuyama S , Roe BA , Chen F , Chu L , Crabtree J , Deschamps S , Do A , Do T , Dorman A , Fang F , Fu Y , Hu P , Hua A , Kenton S , Lai H , Lao HI , Lewis J , Lewis S , Lin S-P , Loh P , Malaj E , Nguyen T , Pan H , Phan S , Qi S , Qian Y , Ray L , Ren Q , Shaull S , Sloan D , Song L , Wang Q , Wang Y , Wang Z , White J , Willingham D , Wu H , Yao Z , Zhan M , Zhang G , Chissoe S , Murray J , Miller N , Minx P , Fulton R , Johnson D , Bemis G , Bentley D , Bradshaw H , Bourne S , Cordes M , Du Z , Fulton L , Goela D , Graves T , Hawkins J , Hinds K , Kemp K , Latreille P , Layman D , Ozersky P , Rohlfing T , Scheet P , Walker C , Wamsley A , Wohldmann P , Pepin K , Nelson J , Korf I , Bedell JA , Hillier L , Mardis E , Waterston R , Wilson R , Emanuel BS , Shaikh T , Kurahashi H , Saitta S , Budarf ML , McDermid HE , Johnson A , Wong ACC , Morrow BE , Edelmann L , Kim UJ , Shizuya H , Simon MI , Dumanski JP , Peyrard M , Kedra D , Seroussi E , Fransson I , Tapia I , Bruder CE , O'Brien KP
Ref : Nature , 402 :489 , 1999
Abstract :
PubMedSearch : Dunham_1999_Nature_402_489
PubMedID: 10591208
Gene_locus related to this paper: human-CES5A , human-SERHL2