Gene_Locus Report

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Gene_locus Report for: maize-k7uba1

Zea mays (Maize). Protein AUXIN RESPONSE 4

Relationship
Family|Auxin-response-4
Block| X
Position in NCBI Life Tree|Zea mays
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > PACMAD clade: N E > Panicoideae: N E > Andropogonodae: N E > Andropogoneae: N E > Tripsacinae: N E > Zea: N E > Zea mays: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : CM000780, XP_008679450
1 UniProt : K7UBA1
1 UniProt : K7UBA1
1 Interpro : K7UBA1
1 Pfam : K7UBA1
1 PIRSF : K7UBA1
1 SUPERFAM : K7UBA1
Sequence
Graphical view for this peptide sequence: maize-k7uba1
Colored MSA for Auxin-response-4 (raw)
MPAADPPVTDAVPDEDAAPRPSPPPPPPRPRPLSLASALPFWFYFAAAVS
LLALLLPHLLPPSSPAPLPPLLLGHLAAGRFLKLDPAPGLFAVTSRPTAA
AGDSPAHRVLVLPGLAAGSLSFRRVLSSLSSRGVHAAALDLPGQGLSPAS
PAATAPARTSALREIMNRGVFHAFEHLVQTGEVPYQEEEPAASAARSPHA
PDEAAAAVARAAEALGVGPVHLVLHDSALAAGAAFASANPGAVRSVTLVD
ATASLPAFPAAVFDVPVLGRLVLRVPALFRGLVRLCCVRGVGAEEAEAYR
AAMRGEGKAEAVVEAWKSMNHSFQLGEWRVSSEEVRRLPMLVLWSGSWSD
MWIDEGKKVAAALPDAKFIYHSGGRWPQVDAFEEISGVITEFVTSAEEAG
SSRW
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPAADPPVTDAVPDEDAAPRPSPPPPPPRPRPLSLASALPFWFYFAAAVS
LLALLLPHLLPPSSPAPLPPLLLGHLAAGRFLKLDPAPGLFAVTSRPTAA
AGDSPAHRVLVLPGLAAGSLSFRRVLSSLSSRGVHAAALDLPGQGLSPAS
PAATAPARTSALREIMNRGVFHAFEHLVQTGEVPYQEEEPAASAARSPHA
PDEAAAAVARAAEALGVGPVHLVLHDSALAAGAAFASANPGAVRSVTLVD
ATASLPAFPAAVFDVPVLGRLVLRVPALFRGLVRLCCVRGVGAEEAEAYR
AAMRGEGKAEAVVEAWKSMNHSFQLGEWRVSSEEVRRLPMLVLWSGSWSD
MWIDEGKKVAAALPDAKFIYHSGGRWPQVDAFEEISGVITEFVTSAEEAG
SSRW


Reference
    Title: The B73 maize genome: complexity, diversity, and dynamics
    Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L and Wilson RK <147 more author(s)>
    Ref: Science, 326:1112, 2009 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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