Dujon_2004_Nature_430_35

Reference

Title : Genome evolution in yeasts - Dujon_2004_Nature_430_35
Author(s) : Dujon B , Sherman D , Fischer G , Durrens P , Casaregola S , Lafontaine I , De Montigny J , Marck C , Neuveglise C , Talla E , Goffard N , Frangeul L , Aigle M , Anthouard V , Babour A , Barbe V , Barnay S , Blanchin S , Beckerich JM , Beyne E , Bleykasten C , Boisrame A , Boyer J , Cattolico L , Confanioleri F , de Daruvar A , Despons L , Fabre E , Fairhead C , Ferry-Dumazet H , Groppi A , Hantraye F , Hennequin C , Jauniaux N , Joyet P , Kachouri R , Kerrest A , Koszul R , Lemaire M , Lesur I , Ma L , Muller H , Nicaud JM , Nikolski M , Oztas S , Ozier-Kalogeropoulos O , Pellenz S , Potier S , Richard GF , Straub ML , Suleau A , Swennen D , Tekaia F , Wesolowski-Louvel M , Westhof E , Wirth B , Zeniou-Meyer M , Zivanovic I , Bolotin-Fukuhara M , Thierry A , Bouchier C , Caudron B , Scarpelli C , Gaillardin C , Weissenbach J , Wincker P , Souciet JL
Ref : Nature , 430 :35 , 2004
Abstract :

Identifying the mechanisms of eukaryotic genome evolution by comparative genomics is often complicated by the multiplicity of events that have taken place throughout the history of individual lineages, leaving only distorted and superimposed traces in the genome of each living organism. The hemiascomycete yeasts, with their compact genomes, similar lifestyle and distinct sexual and physiological properties, provide a unique opportunity to explore such mechanisms. We present here the complete, assembled genome sequences of four yeast species, selected to represent a broad evolutionary range within a single eukaryotic phylum, that after analysis proved to be molecularly as diverse as the entire phylum of chordates. A total of approximately 24,200 novel genes were identified, the translation products of which were classified together with Saccharomyces cerevisiae proteins into about 4,700 families, forming the basis for interspecific comparisons. Analysis of chromosome maps and genome redundancies reveal that the different yeast lineages have evolved through a marked interplay between several distinct molecular mechanisms, including tandem gene repeat formation, segmental duplication, a massive genome duplication and extensive gene loss.

PubMedSearch : Dujon_2004_Nature_430_35
PubMedID: 15229592
Gene_locus related to this paper: canga-apth1 , canga-ppme1 , canga-q6fik7 , canga-q6fiv5 , canga-q6fiw8 , canga-q6fj11 , canga-q6fjh6 , canga-q6fjl0 , canga-q6fjr8 , canga-q6fkj6 , canga-q6fkm9 , canga-q6fku7 , canga-q6fl14 , canga-q6flb5 , canga-q6fle9 , canga-q6flk8 , canga-q6fly1 , canga-q6fly9 , canga-q6fmz4 , canga-q6fnx4 , canga-q6fp28 , canga-q6fpa8 , canga-q6fpi6 , canga-q6fpv7 , canga-q6fpw6 , canga-q6fqj3 , canga-q6fr97 , canga-q6frt7 , canga-q6ftm9 , canga-q6ftu0 , canga-q6ftv9 , canga-q6ftz9 , canga-q6fuf8 , canga-q6fv41 , canga-q6fvu3 , canga-q6fw36 , canga-q6fw94 , canga-q6fwk6 , canga-q6fwm0 , canga-q6fxc7 , canga-q6fxd7 , debha-apth1 , debha-atg15 , debha-b5rtk1 , debha-b5rub4 , debha-b5rue8 , debha-b5rue9 , debha-bna7 , debha-ppme1 , debha-q6bgx3 , debha-q6bh69 , debha-q6bhb8 , debha-q6bhc1 , debha-q6bhd0 , debha-q6bhj7 , debha-q6bi97 , debha-q6biq7 , debha-q6bj53 , debha-q6bkd8 , debha-q6bks1 , debha-q6bky4 , debha-q6bm63 , debha-q6bmh3 , debha-q6bn89 , debha-q6bnj6 , debha-q6bp08 , debha-q6bpb4 , debha-q6bpc0 , debha-q6bpc6 , debha-q6bq10 , debha-q6bq11 , debha-q6bqd9 , debha-q6bqj6 , debha-q6br33 , debha-q6br93 , debha-q6brg1 , debha-q6brw7 , debha-q6bs23 , debha-q6bsc3 , debha-q6bsl8 , debha-q6bsx6 , debha-q6bta5 , debha-q6bty5 , debha-q6btz0 , debha-q6bu73 , debha-q6buk9 , debha-q6but7 , debha-q6bvc4 , debha-q6bvg4 , debha-q6bvg8 , debha-q6bvp4 , debha-q6bw82 , debha-q6bxr7 , debha-q6bxu9 , debha-q6bym5 , debha-q6byn7 , debha-q6bzj8 , debha-q6bzk2 , debha-q6bzm5 , klula-apth1 , klula-ppme1 , klula-q6cin9 , klula-q6ciu6 , klula-q6cj47 , klula-q6cjc8 , klula-q6cjq9 , klula-q6cjs1 , klula-q6cjv9 , klula-q6ckd7 , klula-q6ckk4 , klula-q6ckx4 , klula-q6cl20 , klula-q6clm1 , klula-q6cly8 , klula-q6clz7 , klula-q6cm48 , klula-q6cm49 , klula-q6cmt5 , klula-q6cn71 , klula-q6cnm1 , klula-q6cr74 , klula-q6cr90 , klula-q6crs0 , klula-q6crv8 , klula-q6crz9 , klula-q6cst8 , klula-q6csv8 , klula-q6ctp8 , klula-q6cu02 , klula-q6cu78 , klula-q6cu79 , klula-q6cuv3 , klula-q6cvd3 , klula-q6cw70 , klula-q6cw92 , klula-q6cwu7 , klula-q6cx84 , klula-q6cxa3 , klula-q6cy41 , yarli-apth1 , yarli-atg15 , yarli-BST1B , yarli-lip2 , yarli-LIP3 , yarli-LIP4 , yarli-LIP5 , yarli-LIP7 , yarli-LIP8 , yarli-lipa1 , yarli-ppme1 , yarli-q6bzp1 , yarli-q6bzv7 , yarli-q6c1f5 , yarli-q6c1f7 , yarli-q6c1r3 , yarli-q6c2z2 , yarli-q6c3h1 , yarli-q6c3i6 , yarli-q6c3l1 , yarli-q6c3u6 , yarli-q6c4h8 , yarli-q6c5j1 , yarli-q6c5m4 , yarli-q6c6m4 , yarli-q6c6p7 , yarli-q6c6v2 , yarli-q6c7h3 , yarli-q6c7i7 , yarli-q6c7j5 , yarli-q6c7y6 , yarli-q6c8m4 , yarli-q6c8q4 , yarli-q6c8u4 , yarli-q6c8y2 , yarli-q6c9r0 , yarli-q6c9r1 , yarli-q6c9u0 , yarli-q6c9v4 , yarli-q6c209 , yarli-q6c225 , yarli-q6c493 , yarli-q6c598 , yarli-q6c687 , yarli-q6c822 , yarli-q6cau6 , yarli-q6cax2 , yarli-q6caz1 , yarli-q6cb63 , yarli-q6cba7 , yarli-q6cbb1 , yarli-q6cbe6 , yarli-q6cby1 , yarli-q6ccr0 , yarli-q6cdg1 , yarli-q6cdi6 , yarli-q6cdv9 , yarli-q6ce37 , yarli-q6ceg0 , yarli-q6cep3 , yarli-q6cey5 , yarli-q6cf60 , yarli-q6cfp3 , yarli-q6cfx2 , yarli-q6cg13 , yarli-q6cg27 , yarli-q6cgj3 , yarli-q6chb8 , yarli-q6ci59 , yarli-q6c748 , canga-q6fpj0 , klula-q6cp11 , yarli-q6c4p0 , debha-q6btp5 , debha-kex1

Related information

Gene_locus canga-apth1    canga-ppme1    canga-q6fik7    canga-q6fiv5    canga-q6fiw8    canga-q6fj11    canga-q6fjh6    canga-q6fjl0    canga-q6fjr8    canga-q6fkj6    canga-q6fkm9    canga-q6fku7    canga-q6fl14    canga-q6flb5    canga-q6fle9    canga-q6flk8    canga-q6fly1    canga-q6fly9    canga-q6fmz4    canga-q6fnx4    canga-q6fp28    canga-q6fpa8    canga-q6fpi6    canga-q6fpv7    canga-q6fpw6    canga-q6fqj3    canga-q6fr97    canga-q6frt7    canga-q6ftm9    canga-q6ftu0    canga-q6ftv9    canga-q6ftz9    canga-q6fuf8    canga-q6fv41    canga-q6fvu3    canga-q6fw36    canga-q6fw94    canga-q6fwk6    canga-q6fwm0    canga-q6fxc7    canga-q6fxd7    debha-apth1    debha-atg15    debha-b5rtk1    debha-b5rub4    debha-b5rue8    debha-b5rue9    debha-bna7    debha-ppme1    debha-q6bgx3    debha-q6bh69    debha-q6bhb8    debha-q6bhc1    debha-q6bhd0    debha-q6bhj7    debha-q6bi97    debha-q6biq7    debha-q6bj53    debha-q6bkd8    debha-q6bks1    debha-q6bky4    debha-q6bm63    debha-q6bmh3    debha-q6bn89    debha-q6bnj6    debha-q6bp08    debha-q6bpb4    debha-q6bpc0    debha-q6bpc6    debha-q6bq10    debha-q6bq11    debha-q6bqd9    debha-q6bqj6    debha-q6br33    debha-q6br93    debha-q6brg1    debha-q6brw7    debha-q6bs23    debha-q6bsc3    debha-q6bsl8    debha-q6bsx6    debha-q6bta5    debha-q6bty5    debha-q6btz0    debha-q6bu73    debha-q6buk9    debha-q6but7    debha-q6bvc4    debha-q6bvg4    debha-q6bvg8    debha-q6bvp4    debha-q6bw82    debha-q6bxr7    debha-q6bxu9    debha-q6bym5    debha-q6byn7    debha-q6bzj8    debha-q6bzk2    debha-q6bzm5    klula-apth1    klula-ppme1    klula-q6cin9    klula-q6ciu6    klula-q6cj47    klula-q6cjc8    klula-q6cjq9    klula-q6cjs1    klula-q6cjv9    klula-q6ckd7    klula-q6ckk4    klula-q6ckx4    klula-q6cl20    klula-q6clm1    klula-q6cly8    klula-q6clz7    klula-q6cm48    klula-q6cm49    klula-q6cmt5    klula-q6cn71    klula-q6cnm1    klula-q6cr74    klula-q6cr90    klula-q6crs0    klula-q6crv8    klula-q6crz9    klula-q6cst8    klula-q6csv8    klula-q6ctp8    klula-q6cu02    klula-q6cu78    klula-q6cu79    klula-q6cuv3    klula-q6cvd3    klula-q6cw70    klula-q6cw92    klula-q6cwu7    klula-q6cx84    klula-q6cxa3    klula-q6cy41    yarli-apth1    yarli-atg15    yarli-BST1B    yarli-lip2    yarli-LIP3    yarli-LIP4    yarli-LIP5    yarli-LIP7    yarli-LIP8    yarli-lipa1    yarli-ppme1    yarli-q6bzp1    yarli-q6bzv7    yarli-q6c1f5    yarli-q6c1f7    yarli-q6c1r3    yarli-q6c2z2    yarli-q6c3h1    yarli-q6c3i6    yarli-q6c3l1    yarli-q6c3u6    yarli-q6c4h8    yarli-q6c5j1    yarli-q6c5m4    yarli-q6c6m4    yarli-q6c6p7    yarli-q6c6v2    yarli-q6c7h3    yarli-q6c7i7    yarli-q6c7j5    yarli-q6c7y6    yarli-q6c8m4    yarli-q6c8q4    yarli-q6c8u4    yarli-q6c8y2    yarli-q6c9r0    yarli-q6c9r1    yarli-q6c9u0    yarli-q6c9v4    yarli-q6c209    yarli-q6c225    yarli-q6c493    yarli-q6c598    yarli-q6c687    yarli-q6c822    yarli-q6cau6    yarli-q6cax2    yarli-q6caz1    yarli-q6cb63    yarli-q6cba7    yarli-q6cbb1    yarli-q6cbe6    yarli-q6cby1    yarli-q6ccr0    yarli-q6cdg1    yarli-q6cdi6    yarli-q6cdv9    yarli-q6ce37    yarli-q6ceg0    yarli-q6cep3    yarli-q6cey5    yarli-q6cf60    yarli-q6cfp3    yarli-q6cfx2    yarli-q6cg13    yarli-q6cg27    yarli-q6cgj3    yarli-q6chb8    yarli-q6ci59    yarli-q6c748    canga-q6fpj0    klula-q6cp11    yarli-q6c4p0    debha-q6btp5    debha-kex1

Citations formats

Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, Lafontaine I, De Montigny J, Marck C, Neuveglise C, Talla E, Goffard N, Frangeul L, Aigle M, Anthouard V, Babour A, Barbe V, Barnay S, Blanchin S, Beckerich JM, Beyne E, Bleykasten C, Boisrame A, Boyer J, Cattolico L, Confanioleri F, de Daruvar A, Despons L, Fabre E, Fairhead C, Ferry-Dumazet H, Groppi A, Hantraye F, Hennequin C, Jauniaux N, Joyet P, Kachouri R, Kerrest A, Koszul R, Lemaire M, Lesur I, Ma L, Muller H, Nicaud JM, Nikolski M, Oztas S, Ozier-Kalogeropoulos O, Pellenz S, Potier S, Richard GF, Straub ML, Suleau A, Swennen D, Tekaia F, Wesolowski-Louvel M, Westhof E, Wirth B, Zeniou-Meyer M, Zivanovic I, Bolotin-Fukuhara M, Thierry A, Bouchier C, Caudron B, Scarpelli C, Gaillardin C, Weissenbach J, Wincker P, Souciet JL (2004)
Genome evolution in yeasts
Nature 430 :35

Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, Lafontaine I, De Montigny J, Marck C, Neuveglise C, Talla E, Goffard N, Frangeul L, Aigle M, Anthouard V, Babour A, Barbe V, Barnay S, Blanchin S, Beckerich JM, Beyne E, Bleykasten C, Boisrame A, Boyer J, Cattolico L, Confanioleri F, de Daruvar A, Despons L, Fabre E, Fairhead C, Ferry-Dumazet H, Groppi A, Hantraye F, Hennequin C, Jauniaux N, Joyet P, Kachouri R, Kerrest A, Koszul R, Lemaire M, Lesur I, Ma L, Muller H, Nicaud JM, Nikolski M, Oztas S, Ozier-Kalogeropoulos O, Pellenz S, Potier S, Richard GF, Straub ML, Suleau A, Swennen D, Tekaia F, Wesolowski-Louvel M, Westhof E, Wirth B, Zeniou-Meyer M, Zivanovic I, Bolotin-Fukuhara M, Thierry A, Bouchier C, Caudron B, Scarpelli C, Gaillardin C, Weissenbach J, Wincker P, Souciet JL (2004)
Nature 430 :35