Title : The genome of the jellyfish Clytia hemisphaerica and the evolution of the cnidarian life-cycle - Leclere_2019_Nat.Ecol.Evol_3_801 |
Author(s) : Leclere L , Horin C , Chevalier S , Lapebie P , Dru P , Peron S , Jager M , Condamine T , Pottin K , Romano S , Steger J , Sinigaglia C , Barreau C , Quiroga Artigas G , Ruggiero A , Fourrage C , Kraus JEM , Poulain J , Aury JM , Wincker P , Queinnec E , Technau U , Manuel M , Momose T , Houliston E , Copley RR |
Ref : Nat Ecol Evol , 3 :801 , 2019 |
Abstract : |
PubMedSearch : Leclere_2019_Nat.Ecol.Evol_3_801 |
PubMedID: 30858591 |
Gene_locus related to this paper: 9cnid-b7zf10 , 9cnid-a0a069dlv7 , 9cnid-a0a069duu8 |
Title : Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle - Murat_2018_Nat.Ecol.Evol_2_1956 |
Author(s) : Murat C , Payen T , Noel B , Kuo A , Morin E , Chen J , Kohler A , Krizsan K , Balestrini R , Da Silva C , Montanini B , Hainaut M , Levati E , Barry KW , Belfiori B , Cichocki N , Clum A , Dockter RB , Fauchery L , Guy J , Iotti M , Le Tacon F , Lindquist EA , Lipzen A , Malagnac F , Mello A , Molinier V , Miyauchi S , Poulain J , Riccioni C , Rubini A , Sitrit Y , Splivallo R , Traeger S , Wang M , Zifcakova L , Wipf D , Zambonelli A , Paolocci F , Nowrousian M , Ottonello S , Baldrian P , Spatafora JW , Henrissat B , Nagy LG , Aury JM , Wincker P , Grigoriev IV , Bonfante P , Martin FM |
Ref : Nat Ecol Evol , 2 :1956 , 2018 |
Abstract : |
PubMedSearch : Murat_2018_Nat.Ecol.Evol_2_1956 |
PubMedID: 30420746 |
Gene_locus related to this paper: 9pezi-a0a3n4l4q5 , 9pezi-a0a3n4lpg7 |
Title : Structural and functional partitioning of bread wheat chromosome 3B - Choulet_2014_Science_345_1249721 |
Author(s) : Choulet F , Alberti A , Theil S , Glover N , Barbe V , Daron J , Pingault L , Sourdille P , Couloux A , Paux E , Leroy P , Mangenot S , Guilhot N , Le Gouis J , Balfourier F , Alaux M , Jamilloux V , Poulain J , Durand C , Bellec A , Gaspin C , Safar J , Dolezel J , Rogers J , Vandepoele K , Aury JM , Mayer K , Berges H , Quesneville H , Wincker P , Feuillet C |
Ref : Science , 345 :1249721 , 2014 |
Abstract : |
PubMedSearch : Choulet_2014_Science_345_1249721 |
PubMedID: 25035497 |
Gene_locus related to this paper: wheat-a0a080yuw6 , wheat-w5d1z6 , wheat-a0a077rex4 , wheat-a0a077s1q2 |
Title : Maintaining two mating types: structure of the mating type locus and its role in heterokaryosis in Podospora anserina - Grognet_2014_Genetics_197_421 |
Author(s) : Grognet P , Bidard F , Kuchly C , Tong LC , Coppin E , Benkhali JA , Couloux A , Wincker P , Debuchy R , Silar P |
Ref : Genetics , 197 :421 , 2014 |
Abstract : |
PubMedSearch : Grognet_2014_Genetics_197_421 |
PubMedID: 24558260 |
Gene_locus related to this paper: podan-a0a090d4h4 , podan-a0a090ccl8 , podan-b2azp1 , podan-b2af75 , podan-b2alm5 , podan-b2ass5 , podan-b2aez8 , podan-kex1 , podan-cbpya |
Title : Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti - Cornillot_2012_Nucleic.Acids.Res_40_9102 |
Author(s) : Cornillot E , Hadj-Kaddour K , Dassouli A , Noel B , Ranwez V , Vacherie B , Augagneur Y , Bres V , Duclos A , Randazzo S , Carcy B , Debierre-Grockiego F , Delbecq S , Moubri-Menage K , Shams-Eldin H , Usmani-Brown S , Bringaud F , Wincker P , Vivares CP , Schwarz RT , Schetters TP , Krause PJ , Gorenflot A , Berry V , Barbe V , Ben Mamoun C |
Ref : Nucleic Acids Research , 40 :9102 , 2012 |
Abstract : |
PubMedSearch : Cornillot_2012_Nucleic.Acids.Res_40_9102 |
PubMedID: 22833609 |
Gene_locus related to this paper: babmi-i7isy5 |
Title : Complete genome sequence of the highly hemolytic strain Bacillus cereus F837\/76 - Auger_2012_J.Bacteriol_194_1630 |
Author(s) : Auger S , Galleron N , Segurens B , Dossat C , Bolotin A , Wincker P , Sorokin A |
Ref : Journal of Bacteriology , 194 :1630 , 2012 |
Abstract : |
PubMedSearch : Auger_2012_J.Bacteriol_194_1630 |
PubMedID: 22374959 |
Gene_locus related to this paper: bacan-BA2392 , bacan-BA4324 , bacan-BA5110 , bacce-BC2171 |
Title : Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization - Louis_2012_G3.(Bethesda)_2_299 |
Author(s) : Louis VL , Despons L , Friedrich A , Martin T , Durrens P , Casaregola S , Neuveglise C , Fairhead C , Marck C , Cruz JA , Straub ML , Kugler V , Sacerdot C , Uzunov Z , Thierry A , Weiss S , Bleykasten C , De Montigny J , Jacques N , Jung P , Lemaire M , Mallet S , Morel G , Richard GF , Sarkar A , Savel G , Schacherer J , Seret ML , Talla E , Samson G , Jubin C , Poulain J , Vacherie B , Barbe V , Pelletier E , Sherman DJ , Westhof E , Weissenbach J , Baret PV , Wincker P , Gaillardin C , Dujon B , Souciet JL |
Ref : G3 (Bethesda) , 2 :299 , 2012 |
Abstract : |
PubMedSearch : Louis_2012_G3.(Bethesda)_2_299 |
PubMedID: 22384408 |
Gene_locus related to this paper: picso-g8ycc9 , picso-g8yet0 , picso-g8yb96 , picso-g8ym39 , erecy-g8jrp5 , picso-g8y652 |
Title : Genome sequence of the stramenopile Blastocystis, a human anaerobic parasite - Denoeud_2011_Genome.Biol_12_R29 |
Author(s) : Denoeud F , Roussel M , Noel B , Wawrzyniak I , Da Silva C , Diogon M , Viscogliosi E , Brochier-Armanet C , Couloux A , Poulain J , Segurens B , Anthouard V , Texier C , Blot N , Poirier P , Ng GC , Tan KS , Artiguenave F , Jaillon O , Aury JM , Delbac F , Wincker P , Vivares CP , El Alaoui H |
Ref : Genome Biol , 12 :R29 , 2011 |
Abstract : |
PubMedSearch : Denoeud_2011_Genome.Biol_12_R29 |
PubMedID: 21439036 |
Gene_locus related to this paper: blaho-d8m103 , blaho-d8lw93 |
Title : Complete genome sequence of the clinical Streptococcus salivarius strain CCHSS3 - Delorme_2011_J.Bacteriol_193_5041 |
Author(s) : Delorme C , Guedon E , Pons N , Cruaud C , Couloux A , Loux V , Chiapello H , Poyart C , Gautier C , Sanchez N , Almeida M , Kennedy SP , Ehrlich SD , Gibrat JF , Wincker P , Renault P |
Ref : Journal of Bacteriology , 193 :5041 , 2011 |
Abstract : |
PubMedSearch : Delorme_2011_J.Bacteriol_193_5041 |
PubMedID: 21742894 |
Title : Complete genome sequence of the commensal Streptococcus salivarius strain JIM8777 - Guedon_2011_J.Bacteriol_193_5024 |
Author(s) : Guedon E , Delorme C , Pons N , Cruaud C , Loux V , Couloux A , Gautier C , Sanchez N , Layec S , Galleron N , Almeida M , van de Guchte M , Kennedy SP , Ehrlich SD , Gibrat JF , Wincker P , Renault P |
Ref : Journal of Bacteriology , 193 :5024 , 2011 |
Abstract : |
PubMedSearch : Guedon_2011_J.Bacteriol_193_5024 |
PubMedID: 21742871 |
Title : The complete genome of Propionibacterium freudenreichii CIRM-BIA1, a hardy actinobacterium with food and probiotic applications - Falentin_2010_PLoS.ONE_5_E11748 |
Author(s) : Falentin H , Deutsch SM , Jan G , Loux V , Thierry A , Parayre S , Maillard MB , Dherbecourt J , Cousin FJ , Jardin J , Siguier P , Couloux A , Barbe V , Vacherie B , Wincker P , Gibrat JF , Gaillardin C , Lortal S |
Ref : PLoS ONE , 5 :e11748 , 2010 |
Abstract : |
PubMedSearch : Falentin_2010_PLoS.ONE_5_E11748 |
PubMedID: 20668525 |
Gene_locus related to this paper: profr-b3cky9 , profr-b3ckz1 , profr-b3ckz0 , profr-b3cky3 |
Title : Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea - Zivanovic_2009_Genome.Biol_10_R70 |
Author(s) : Zivanovic Y , Armengaud J , Lagorce A , Leplat C , Guerin P , Dutertre M , Anthouard V , Forterre P , Wincker P , Confalonieri F |
Ref : Genome Biol , 10 :R70 , 2009 |
Abstract : |
PubMedSearch : Zivanovic_2009_Genome.Biol_10_R70 |
PubMedID: 19558674 |
Gene_locus related to this paper: thegj-c5a5e0 , thegj-c5a5m2 |
Title : Eukaryote-to-eukaryote gene transfer events revealed by the genome sequence of the wine yeast Saccharomyces cerevisiae EC1118 - Novo_2009_Proc.Natl.Acad.Sci.U.S.A_106_16333 |
Author(s) : Novo M , Bigey F , Beyne E , Galeote V , Gavory F , Mallet S , Cambon B , Legras JL , Wincker P , Casaregola S , Dequin S |
Ref : Proc Natl Acad Sci U S A , 106 :16333 , 2009 |
Abstract : |
PubMedSearch : Novo_2009_Proc.Natl.Acad.Sci.U.S.A_106_16333 |
PubMedID: 19805302 |
Gene_locus related to this paper: yeast-AIM2 , yeast-BST1 , yeast-cbpy1 , yeast-cld1 , yeast-dap1 , yeast-dap2 , yeast-dlhh , yeast-ECM18 , yeast-FSH1 , yeast-FSH3 , yeast-ict1 , yeast-kex01 , yeast-MCFS1 , yeast-MCFS2 , yeast-met2 , yeast-mgll , yeast-pdat , yeast-ppme1 , yeast-ROG1 , yeast-SAY1 , yeast-tgl1 , yeast-tgl2 , yeast-yby9 , yeast-YDL109C , yeast-YDR428C , yeast-YDR444W , yeast-yg19 , yeast-yj77 , yeast-yjg8 , yeast-YLL012W , yeast-YLR020C , yeast-YLR118c , yeast-ym60 , yeast-ynl5 , yeast-yo059 , yeast-YPR147C , yeast-hda1 |
Title : Large-scale identification of human genes implicated in epidermal barrier function - Toulza_2007_Genome.Biol_8_R107 |
Author(s) : Toulza E , Mattiuzzo NR , Galliano MF , Jonca N , Dossat C , Jacob D , de Daruvar A , Wincker P , Serre G , Guerrin M |
Ref : Genome Biol , 8 :R107 , 2007 |
Abstract : |
PubMedSearch : Toulza_2007_Genome.Biol_8_R107 |
PubMedID: 17562024 |
Title : Deciphering the evolution and metabolism of an anammox bacterium from a community genome - Strous_2006_Nature_440_790 |
Author(s) : Strous M , Pelletier E , Mangenot S , Rattei T , Lehner A , Taylor MW , Horn M , Daims H , Bartol-Mavel D , Wincker P , Barbe V , Fonknechten N , Vallenet D , Segurens B , Schenowitz-Truong C , Medigue C , Collingro A , Snel B , Dutilh BE , Op den Camp HJ , van der Drift C , Cirpus I , van de Pas-Schoonen KT , Harhangi HR , van Niftrik L , Schmid M , Keltjens J , van de Vossenberg J , Kartal B , Meier H , Frishman D , Huynen MA , Mewes HW , Weissenbach J , Jetten MS , Wagner M , Le Paslier D |
Ref : Nature , 440 :790 , 2006 |
Abstract : |
PubMedSearch : Strous_2006_Nature_440_790 |
PubMedID: 16598256 |
Gene_locus related to this paper: 9bact-q1py93 , 9bact-q1q3k9 , 9bact-q1q414 |
Title : Remodelling of the homeobox gene complement in the tunicate Oikopleura dioica - Edvardsen_2005_Curr.Biol_15_R12 |
Author(s) : Edvardsen RB , Seo HC , Jensen MF , Mialon A , Mikhaleva J , Bjordal M , Cartry J , Reinhardt R , Weissenbach J , Wincker P , Chourrout D |
Ref : Current Biology , 15 :R12 , 2005 |
Abstract : |
PubMedSearch : Edvardsen_2005_Curr.Biol_15_R12 |
PubMedID: 15649342 |
Gene_locus related to this paper: 9uroc-q676a9 , oikdi-cholike.1 , oikdi-cholike.2 |
Title : Comparative analysis of BAC and whole genome shotgun sequences from an Anopheles gambiae region related to Plasmodium encapsulation - Eiglmeier_2005_Insect.Biochem.Mol.Biol_35_799 |
Author(s) : Eiglmeier K , Wincker P , Cattolico L , Anthouard V , Holm I , Eckenberg R , Quesneville H , Jaillon O , Collins FH , Weissenbach J , Brey PT , Roth CW |
Ref : Insect Biochemistry & Molecular Biology , 35 :799 , 2005 |
Abstract : |
PubMedSearch : Eiglmeier_2005_Insect.Biochem.Mol.Biol_35_799 |
PubMedID: 15944077 |
Gene_locus related to this paper: anoga-agCG50851 , anoga-ebiG8504 |
Title : High coding density on the largest Paramecium tetraurelia somatic chromosome - Zagulski_2004_Curr.Biol_14_1397 |
Author(s) : Zagulski M , Nowak JK , Le Mouel A , Nowacki M , Migdalski A , Gromadka R , Noel B , Blanc I , Dessen P , Wincker P , Keller AM , Cohen J , Meyer E , Sperling L |
Ref : Current Biology , 14 :1397 , 2004 |
Abstract : |
PubMedSearch : Zagulski_2004_Curr.Biol_14_1397 |
PubMedID: 15296759 |
Gene_locus related to this paper: parte-q6bfb1 , parte-q6bfm1 , parte-q6bgf1 , parte-q6bgk8 |
Title : Whole genome sequence comparisons and full-length cDNA sequences: a combined approach to evaluate and improve Arabidopsis genome annotation - Castelli_2004_Genome.Res_14_406 |
Author(s) : Castelli V , Aury JM , Jaillon O , Wincker P , Clepet C , Menard M , Cruaud C , Quetier F , Scarpelli C , Schachter V , Temple G , Caboche M , Weissenbach J , Salanoubat M |
Ref : Genome Res , 14 :406 , 2004 |
Abstract : |
PubMedSearch : Castelli_2004_Genome.Res_14_406 |
PubMedID: 14993207 |
Gene_locus related to this paper: arath-SCP28 |
Title : Hox cluster disintegration with persistent anteroposterior order of expression in Oikopleura dioica - Seo_2004_Nature_431_67 |
Author(s) : Seo HC , Edvardsen RB , Maeland AD , Bjordal M , Jensen MF , Hansen A , Flaat M , Weissenbach J , Lehrach H , Wincker P , Reinhardt R , Chourrout D |
Ref : Nature , 431 :67 , 2004 |
Abstract : |
PubMedSearch : Seo_2004_Nature_431_67 |
PubMedID: 15343333 |
Gene_locus related to this paper: 9uroc-q676a9 , oikdi-cholike.1 , oikdi-cholike.2 |
Title : Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome - Dufresne_2003_Proc.Natl.Acad.Sci.U.S.A_100_10020 |
Author(s) : Dufresne A , Salanoubat M , Partensky F , Artiguenave F , Axmann IM , Barbe V , Duprat S , Galperin MY , Koonin EV , Le Gall F , Makarova KS , Ostrowski M , Oztas S , Robert C , Rogozin IB , Scanlan DJ , Tandeau de Marsac N , Weissenbach J , Wincker P , Wolf YI , Hess WR |
Ref : Proc Natl Acad Sci U S A , 100 :10020 , 2003 |
Abstract : |
PubMedSearch : Dufresne_2003_Proc.Natl.Acad.Sci.U.S.A_100_10020 |
PubMedID: 12917486 |
Gene_locus related to this paper: proma-MHPC2 , proma-PRO1109 , proma-q7v9n9 , proma-q7vb48 , proma-q7vb60 , proma-q7vbe1 , proma-q7vbl5 , proma-q7vcg4 , proma-q7vdr9 , proma-q7ved1 |
Title : Comparative genome and proteome analysis of Anopheles gambiae and Drosophila melanogaster - Zdobnov_2002_Science_298_149 |
Author(s) : Zdobnov EM , von Mering C , Letunic I , Torrents D , Suyama M , Copley RR , Christophides GK , Thomasova D , Holt RA , Subramanian GM , Mueller HM , Dimopoulos G , Law JH , Wells MA , Birney E , Charlab R , Halpern AL , Kokoza E , Kraft CL , Lai Z , Lewis S , Louis C , Barillas-Mury C , Nusskern D , Rubin GM , Salzberg SL , Sutton GG , Topalis P , Wides R , Wincker P , Yandell M , Collins FH , Ribeiro J , Gelbart WM , Kafatos FC , Bork P |
Ref : Science , 298 :149 , 2002 |
Abstract : |
PubMedSearch : Zdobnov_2002_Science_298_149 |
PubMedID: 12364792 |
Title : Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi - Katinka_2001_Nature_414_450 |
Author(s) : Katinka MD , Duprat S , Cornillot E , Metenier G , Thomarat F , Prensier G , Barbe V , Peyretaillade E , Brottier P , Wincker P , Delbac F , El Alaoui H , Peyret P , Saurin W , Gouy M , Weissenbach J , Vivares CP |
Ref : Nature , 414 :450 , 2001 |
Abstract : |
PubMedSearch : Katinka_2001_Nature_414_450 |
PubMedID: 11719806 |
Gene_locus related to this paper: enccu-ECU07.0900 , enccu-ECU09.0730 , enccu-q8sut7 , enccu-Q8SVX3 |
Title : The complete genome sequence of the lactic acid bacterium Lactococcus lactis ssp. lactis IL1403 - Bolotin_2001_Genome.Res_11_731 |
Author(s) : Bolotin A , Wincker P , Mauger S , Jaillon O , Malarme K , Weissenbach J , Ehrlich SD , Sorokin A |
Ref : Genome Res , 11 :731 , 2001 |
Abstract : |
PubMedSearch : Bolotin_2001_Genome.Res_11_731 |
PubMedID: 11337471 |
Gene_locus related to this paper: lacla-cpo , lacla-ESTA , lacla-menX , lacla-pepx , lacla-YAHD , lacla-YBCH , lacla-YEEB , lacla-YMGC , lacla-YNDB , lacla-YNEB , lacla-YQAG , lacla-YQBF , lacla-YRIC , lacla-YUFC |