Thomson NR

References (41)

Title : Genome evolution and plasticity of Serratia marcescens, an important multidrug-resistant nosocomial pathogen - Iguchi_2014_Genome.Biol.Evol_6_2096
Author(s) : Iguchi A , Nagaya Y , Pradel E , Ooka T , Ogura Y , Katsura K , Kurokawa K , Oshima K , Hattori M , Parkhill J , Sebaihia M , Coulthurst SJ , Gotoh N , Thomson NR , Ewbank JJ , Hayashi T
Ref : Genome Biol Evol , 6 :2096 , 2014
PubMedID: 25070509
Gene_locus related to this paper: serma-a0a031rry9 , serma-a0a0a5sc46

Title : Parallel independent evolution of pathogenicity within the genus Yersinia - Reuter_2014_Proc.Natl.Acad.Sci.U.S.A_111_6768
Author(s) : Reuter S , Connor TR , Barquist L , Walker D , Feltwell T , Harris SR , Fookes M , Hall ME , Petty NK , Fuchs TM , Corander J , Dufour M , Ringwood T , Savin C , Bouchier C , Martin L , Miettinen M , Shubin M , Riehm JM , Laukkanen-Ninios R , Sihvonen LM , Siitonen A , Skurnik M , Falcao JP , Fukushima H , Scholz HC , Prentice MB , Wren BW , Parkhill J , Carniel E , Achtman M , McNally A , Thomson NR
Ref : Proc Natl Acad Sci U S A , 111 :6768 , 2014
PubMedID: 24753568
Gene_locus related to this paper: yeren-k1bwy7

Title : Genomic characterisation of invasive non-typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans isolates from Malawi - Bronowski_2013_PLoS.Negl.Trop.Dis_7_e2557
Author(s) : Bronowski C , Fookes MC , Gilderthorp R , Ashelford KE , Harris SR , Phiri A , Hall N , Gordon MA , Wain J , Hart CA , Wigley P , Thomson NR , Winstanley C
Ref : PLoS Negl Trop Dis , 7 :e2557 , 2013
PubMedID: 24244782

Title : Distinguishable epidemics of multidrug-resistant Salmonella Typhimurium DT104 in different hosts - Mather_2013_Science_341_1514
Author(s) : Mather AE , Reid SW , Maskell DJ , Parkhill J , Fookes MC , Harris SR , Brown DJ , Coia JE , Mulvey MR , Gilmour MW , Petrovska L , de Pinna E , Kuroda M , Akiba M , Izumiya H , Connor TR , Suchard MA , Lemey P , Mellor DJ , Haydon DT , Thomson NR
Ref : Science , 341 :1514 , 2013
PubMedID: 24030491

Title : Sequencing and functional annotation of avian pathogenic Escherichia coli serogroup O78 strains reveal the evolution of E. coli lineages pathogenic for poultry via distinct mechanisms - Dziva_2013_Infect.Immun_81_838
Author(s) : Dziva F , Hauser H , Connor TR , van Diemen PM , Prescott G , Langridge GC , Eckert S , Chaudhuri RR , Ewers C , Mellata M , Mukhopadhyay S , Curtiss R, 3rd , Dougan G , Wieler LH , Thomson NR , Pickard DJ , Stevens MP
Ref : Infect Immun , 81 :838 , 2013
PubMedID: 23275093
Gene_locus related to this paper: ecoli-yaim , ecoli-ycfp , ecoli-yqia , ecoli-Z1930

Title : The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium - Kroger_2012_Proc.Natl.Acad.Sci.U.S.A_109_E1277
Author(s) : Kroger C , Dillon SC , Cameron AD , Papenfort K , Sivasankaran SK , Hokamp K , Chao Y , Sittka A , Hebrard M , Handler K , Colgan A , Leekitcharoenphon P , Langridge GC , Lohan AJ , Loftus B , Lucchini S , Ussery DW , Dorman CJ , Thomson NR , Vogel J , Hinton JC
Ref : Proc Natl Acad Sci U S A , 109 :E1277 , 2012
PubMedID: 22538806

Title : Salmonella bongori provides insights into the evolution of the Salmonellae - Fookes_2011_PLoS.Pathog_7_e1002191
Author(s) : Fookes M , Schroeder GN , Langridge GC , Blondel CJ , Mammina C , Connor TR , Seth-Smith H , Vernikos GS , Robinson KS , Sanders M , Petty NK , Kingsley RA , Baumler AJ , Nuccio SP , Contreras I , Santiviago CA , Maskell D , Barrow P , Humphrey T , Nastasi A , Roberts M , Frankel G , Parkhill J , Dougan G , Thomson NR
Ref : PLoS Pathog , 7 :e1002191 , 2011
PubMedID: 21876672
Gene_locus related to this paper: salbc-f8vhq9

Title : Genome sequences of Salmonella enterica serovar typhimurium, Choleraesuis, Dublin, and Gallinarum strains of well- defined virulence in food-producing animals - Richardson_2011_J.Bacteriol_193_3162
Author(s) : Richardson EJ , Limaye B , Inamdar H , Datta A , Manjari KS , Pullinger GD , Thomson NR , Joshi RR , Watson M , Stevens MP
Ref : Journal of Bacteriology , 193 :3162 , 2011
PubMedID: 21478351
Gene_locus related to this paper: salen-OPDB , salti-q8z717 , salty-AES , salty-DLHH , salty-ENTF , salty-FES , salty-IROD , salty-IROE , salty-PLDB , salty-STM4506 , salty-STY3846 , salty-yafa , salty-YBFF , salty-ycfp , salty-YFBB , salty-YHET , salty-YQIA

Title : The Citrobacter rodentium genome sequence reveals convergent evolution with human pathogenic Escherichia coli - Petty_2010_J.Bacteriol_192_525
Author(s) : Petty NK , Bulgin R , Crepin VF , Cerdeno-Tarraga AM , Schroeder GN , Quail MA , Lennard N , Corton C , Barron A , Clark L , Toribio AL , Parkhill J , Dougan G , Frankel G , Thomson NR
Ref : Journal of Bacteriology , 192 :525 , 2010
PubMedID: 19897651
Gene_locus related to this paper: citk8-bioh , citk8-y1948 , citri-d2th08 , citri-d2tjf8 , citri-d2tjy8 , citri-d2tk80 , citri-d2tmm5 , citri-d2tmq5 , citri-d2tri3 , citri-d2trm8

Title : A commensal gone bad: complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407 - Crossman_2010_J.Bacteriol_192_5822
Author(s) : Crossman LC , Chaudhuri RR , Beatson SA , Wells TJ , Desvaux M , Cunningham AF , Petty NK , Mahon V , Brinkley C , Hobman JL , Savarino SJ , Turner SM , Pallen MJ , Penn CW , Parkhill J , Turner AK , Johnson TJ , Thomson NR , Smith SG , Henderson IR
Ref : Journal of Bacteriology , 192 :5822 , 2010
PubMedID: 20802035
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-YFBB , ecoli-yiel , ecoli-yqia

Title : Legionella pneumophila strain 130b possesses a unique combination of type IV secretion systems and novel Dot\/Icm secretion system effector proteins - Schroeder_2010_J.Bacteriol_192_6001
Author(s) : Schroeder GN , Petty NK , Mousnier A , Harding CR , Vogrin AJ , Wee B , Fry NK , Harrison TG , Newton HJ , Thomson NR , Beatson SA , Dougan G , Hartland EL , Frankel G
Ref : Journal of Bacteriology , 192 :6001 , 2010
PubMedID: 20833813
Gene_locus related to this paper: legpa-q5x4t1 , legpl-q5wua5

Title : The Swedish new variant of Chlamydia trachomatis: genome sequence, morphology, cell tropism and phenotypic characterization - Unemo_2010_Microbiology_156_1394
Author(s) : Unemo M , Seth-Smith HM , Cutcliffe LT , Skilton RJ , Barlow D , Goulding D , Persson K , Harris SR , Kelly A , Bjartling C , Fredlund H , Olcen P , Thomson NR , Clarke IN
Ref : Microbiology , 156 :1394 , 2010
PubMedID: 20093289
Gene_locus related to this paper: chltr-CT073 , chltr-CT136

Title : Complete genome sequence and comparative metabolic profiling of the prototypical enteroaggregative Escherichia coli strain 042 - Chaudhuri_2010_PLoS.One_5_e8801
Author(s) : Chaudhuri RR , Sebaihia M , Hobman JL , Webber MA , Leyton DL , Goldberg MD , Cunningham AF , Scott-Tucker A , Ferguson PR , Thomas CM , Frankel G , Tang CM , Dudley EG , Roberts IS , Rasko DA , Pallen MJ , Parkhill J , Nataro JP , Thomson NR , Henderson IR
Ref : PLoS ONE , 5 :e8801 , 2010
PubMedID: 20098708
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-MCMK , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-YfhR , yerpe-YBTT

Title : The genome of Burkholderia cenocepacia J2315, an epidemic pathogen of cystic fibrosis patients - Holden_2009_J.Bacteriol_191_261
Author(s) : Holden MT , Seth-Smith HM , Crossman LC , Sebaihia M , Bentley SD , Cerdeno-Tarraga AM , Thomson NR , Bason N , Quail MA , Sharp S , Cherevach I , Churcher C , Goodhead I , Hauser H , Holroyd N , Mungall K , Scott P , Walker D , White B , Rose H , Iversen P , Mil-Homens D , Rocha EP , Fialho AM , Baldwin A , Dowson C , Barrell BG , Govan JR , Vandamme P , Hart CA , Mahenthiralingam E , Parkhill J
Ref : Journal of Bacteriology , 191 :261 , 2009
PubMedID: 18931103
Gene_locus related to this paper: burcj-b4e794 , 9burk-a0u8m3 , burcj-b4ek59 , burcj-b4ehl7 , burca-q1bk56 , burce-a0a088tsj6 , burcj-b4ecv6

Title : Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348\/69 - Iguchi_2009_J.Bacteriol_191_347
Author(s) : Iguchi A , Thomson NR , Ogura Y , Saunders D , Ooka T , Henderson IR , Harris D , Asadulghani M , Kurokawa K , Dean P , Kenny B , Quail MA , Thurston S , Dougan G , Hayashi T , Parkhill J , Frankel G
Ref : Journal of Bacteriology , 191 :347 , 2009
PubMedID: 18952797
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR

Title : Pseudogene accumulation in the evolutionary histories of Salmonella enterica serovars Paratyphi A and Typhi - Holt_2009_BMC.Genomics_10_36
Author(s) : Holt KE , Thomson NR , Wain J , Langridge GC , Hasan R , Bhutta ZA , Quail MA , Norbertczak H , Walker D , Simmonds M , White B , Bason N , Mungall K , Dougan G , Parkhill J
Ref : BMC Genomics , 10 :36 , 2009
PubMedID: 19159446

Title : Co-evolution of genomes and plasmids within Chlamydia trachomatis and the emergence in Sweden of a new variant strain - Seth-Smith_2009_BMC.Genomics_10_239
Author(s) : Seth-Smith HM , Harris SR , Persson K , Marsh P , Barron A , Bignell A , Bjartling C , Clark L , Cutcliffe LT , Lambden PR , Lennard N , Lockey SJ , Quail MA , Salim O , Skilton RJ , Wang Y , Holland MJ , Parkhill J , Thomson NR , Clarke IN
Ref : BMC Genomics , 10 :239 , 2009
PubMedID: 19460133
Gene_locus related to this paper: chltr-CT073 , chltr-CT136

Title : Epidemic multiple drug resistant Salmonella Typhimurium causing invasive disease in sub-Saharan Africa have a distinct genotype - Kingsley_2009_Genome.Res_19_2279
Author(s) : Kingsley RA , Msefula CL , Thomson NR , Kariuki S , Holt KE , Gordon MA , Harris D , Clarke L , Whitehead S , Sangal V , Marsh K , Achtman M , Molyneux ME , Cormican M , Parkhill J , MacLennan CA , Heyderman RS , Dougan G
Ref : Genome Res , 19 :2279 , 2009
PubMedID: 19901036
Gene_locus related to this paper: salen-OPDB , salti-q8z717 , salty-AES , salty-BIOH , salty-DLHH , salty-ENTF , salty-FES , salty-IROD , salty-IROE , salty-P74847 , salty-PLDB , salty-STM0332 , salty-STM4506 , salty-STY1441 , salty-STY2428 , salty-STY3846 , salty-yafa , salty-YBFF , salty-ycfp , salty-YFBB , salty-YHET , salty-YQIA

Title : The genome sequence of the fish pathogen Aliivibrio salmonicida strain LFI1238 shows extensive evidence of gene decay - Hjerde_2008_BMC.Genomics_9_616
Author(s) : Hjerde E , Lorentzen MS , Holden MT , Seeger K , Paulsen S , Bason N , Churcher C , Harris D , Norbertczak H , Quail MA , Sanders S , Thurston S , Parkhill J , Willassen NP , Thomson NR
Ref : BMC Genomics , 9 :616 , 2008
PubMedID: 19099551
Gene_locus related to this paper: alisl-b6elz2 , alisl-b6ek45

Title : The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates - Rasko_2008_J.Bacteriol_190_6881
Author(s) : Rasko DA , Rosovitz MJ , Myers GS , Mongodin EF , Fricke WF , Gajer P , Crabtree J , Sebaihia M , Thomson NR , Chaudhuri R , Henderson IR , Sperandio V , Ravel J
Ref : Journal of Bacteriology , 190 :6881 , 2008
PubMedID: 18676672
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z2445 , ecoli-YfhR

Title : Complete genome sequence of uropathogenic Proteus mirabilis, a master of both adherence and motility - Pearson_2008_J.Bacteriol_190_4027
Author(s) : Pearson MM , Sebaihia M , Churcher C , Quail MA , Seshasayee AS , Luscombe NM , Abdellah Z , Arrosmith C , Atkin B , Chillingworth T , Hauser H , Jagels K , Moule S , Mungall K , Norbertczak H , Rabbinowitsch E , Walker D , Whithead S , Thomson NR , Rather PN , Parkhill J , Mobley HL
Ref : Journal of Bacteriology , 190 :4027 , 2008
PubMedID: 18375554
Gene_locus related to this paper: promh-b4euu8 , promh-b4ev30 , promh-b4evj5 , promh-b4f0a1 , promh-bioh , promi-c2lhp6 , promi-c2lla8 , promi-NRPS , promi-NRPT , promi-k1gzm2 , promh-b4eve8

Title : Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates - Thomson_2008_Genome.Res_18_161
Author(s) : Thomson NR , Holden MT , Carder C , Lennard N , Lockey SJ , Marsh P , Skipp P , O'Connor CD , Goodhead I , Norbertzcak H , Harris B , Ormond D , Rance R , Quail MA , Parkhill J , Stephens RS , Clarke IN
Ref : Genome Res , 18 :161 , 2008
PubMedID: 18032721
Gene_locus related to this paper: chltr-CT073 , chltr-CT136

Title : Comparative genome analysis of Salmonella Enteritidis PT4 and Salmonella Gallinarum 287\/91 provides insights into evolutionary and host adaptation pathways - Thomson_2008_Genome.Res_18_1624
Author(s) : Thomson NR , Clayton DJ , Windhorst D , Vernikos G , Davidson S , Churcher C , Quail MA , Stevens M , Jones MA , Watson M , Barron A , Layton A , Pickard D , Kingsley RA , Bignell A , Clark L , Harris B , Ormond D , Abdellah Z , Brooks K , Cherevach I , Chillingworth T , Woodward J , Norberczak H , Lord A , Arrowsmith C , Jagels K , Moule S , Mungall K , Sanders M , Whitehead S , Chabalgoity JA , Maskell D , Humphrey T , Roberts M , Barrow PA , Dougan G , Parkhill J
Ref : Genome Res , 18 :1624 , 2008
PubMedID: 18583645
Gene_locus related to this paper: salen-OPDB , salti-q8z717 , salty-AES , salty-BIOH , salty-DLHH , salty-ENTF , salty-FES , salty-IROD , salty-IROE , salty-P74847 , salty-PLDB , salty-STM0332 , salty-STM4506 , salty-STY1441 , salty-STY2428 , salty-STY3846 , salty-yafa , salty-YBFF , salty-ycfp , salty-YFBB , salty-YHET , salty-YQIA

Title : The complete genome, comparative and functional analysis of Stenotrophomonas maltophilia reveals an organism heavily shielded by drug resistance determinants - Crossman_2008_Genome.Biol_9_R74
Author(s) : Crossman LC , Gould VC , Dow JM , Vernikos GS , Okazaki A , Sebaihia M , Saunders D , Arrowsmith C , Carver T , Peters N , Adlem E , Kerhornou A , Lord A , Murphy L , Seeger K , Squares R , Rutter S , Quail MA , Rajandream MA , Harris D , Churcher C , Bentley SD , Parkhill J , Thomson NR , Avison MB
Ref : Genome Biol , 9 :R74 , 2008
PubMedID: 18419807
Gene_locus related to this paper: strm5-b4sjf3 , strm5-b4sly1 , strm5-b4smq6 , strm5-b4st20 , strm5-bioh , strmk-b2fhb1 , strmk-b2fju9 , strmk-b2fkx8 , strmk-b2fl50 , strmk-b2fl54 , strmk-b2flj0 , strmk-b2fnc5 , strmk-b2fre3 , strmk-b2frm1 , strmk-b2frs0 , strmk-b2fsp0 , strmk-b2ftw9 , strmk-b2fuf3 , strmk-metx , xanma-P95782 , strmk-b2fmj5 , strmk-b2fpy9 , strmk-b2ftk7 , strmk-b2frv5

Title : Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes - Sebaihia_2007_Genome.Res_17_1082
Author(s) : Sebaihia M , Peck MW , Minton NP , Thomson NR , Holden MT , Mitchell WJ , Carter AT , Bentley SD , Mason DR , Crossman L , Paul CJ , Ivens A , Wells-Bennik MH , Davis IJ , Cerdeno-Tarraga AM , Churcher C , Quail MA , Chillingworth T , Feltwell T , Fraser A , Goodhead I , Hance Z , Jagels K , Larke N , Maddison M , Moule S , Mungall K , Norbertczak H , Rabbinowitsch E , Sanders M , Simmonds M , White B , Whithead S , Parkhill J
Ref : Genome Res , 17 :1082 , 2007
PubMedID: 17519437
Gene_locus related to this paper: clobh-A5I3I2 , clobh-A51055 , clob1-a7fqm2 , clob1-a7fv94 , clobl-a7gbn0 , clobh-pip , clobh-a5i3m0

Title : The complete genome sequence and comparative genome analysis of the high pathogenicity Yersinia enterocolitica strain 8081 - Thomson_2006_PLoS.Genet_2_e206
Author(s) : Thomson NR , Howard S , Wren BW , Holden MT , Crossman L , Challis GL , Churcher C , Mungall K , Brooks K , Chillingworth T , Feltwell T , Abdellah Z , Hauser H , Jagels K , Maddison M , Moule S , Sanders M , Whitehead S , Quail MA , Dougan G , Parkhill J , Prentice MB
Ref : PLoS Genet , 2 :e206 , 2006
PubMedID: 17173484
Gene_locus related to this paper: yere8-a1jik0 , yere8-a1jmx1 , yere8-a1jrp7 , yere8-bioh , yere8-menh , yere8-y3204 , yeren-fes , yeren-YPLA , yeren-YqiA , yermo-c4sfz7 , yerpe-y1616 , yerpe-YPO1501 , yerbe-c4rym7

Title : The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome - Sebaihia_2006_Nat.Genet_38_779
Author(s) : Sebaihia M , Wren BW , Mullany P , Fairweather NF , Minton N , Stabler R , Thomson NR , Roberts AP , Cerdeno-Tarraga AM , Wang H , Holden MT , Wright A , Churcher C , Quail MA , Baker S , Bason N , Brooks K , Chillingworth T , Cronin A , Davis P , Dowd L , Fraser A , Feltwell T , Hance Z , Holroyd S , Jagels K , Moule S , Mungall K , Price C , Rabbinowitsch E , Sharp S , Simmonds M , Stevens K , Unwin L , Whithead S , Dupuy B , Dougan G , Barrell B , Parkhill J
Ref : Nat Genet , 38 :779 , 2006
PubMedID: 16804543
Gene_locus related to this paper: pepdi-t4eki5 , clod6-q18a60 , clod6-q183v0 , clodi-HYDD , clodr-c9ynf2 , pepd6-pip , pepdi-g6brr4

Title : The genome of Rhizobium leguminosarum has recognizable core and accessory components - Young_2006_Genome.Biol_7_R34
Author(s) : Young JP , Crossman LC , Johnston AW , Thomson NR , Ghazoui ZF , Hull KH , Wexler M , Curson AR , Todd JD , Poole PS , Mauchline TH , East AK , Quail MA , Churcher C , Arrowsmith C , Cherevach I , Chillingworth T , Clarke K , Cronin A , Davis P , Fraser A , Hance Z , Hauser H , Jagels K , Moule S , Mungall K , Norbertczak H , Rabbinowitsch E , Sanders M , Simmonds M , Whitehead S , Parkhill J
Ref : Genome Biol , 7 :R34 , 2006
PubMedID: 16640791
Gene_locus related to this paper: rhiec-q2k7y0 , rhiec-q2k107 , rhiec-q2kav5 , rhiec-q2ke86 , rhil3-q1m3b7 , rhil3-q1m3u0 , rhil3-q1m4b4 , rhil3-q1m4e5 , rhil3-q1m4g3 , rhil3-q1m4h0 , rhil3-q1m5k0 , rhil3-q1m5s6 , rhil3-q1m6q0 , rhil3-q1m6u8 , rhil3-q1m6w8 , rhil3-q1m7c2 , rhil3-q1m7c3 , rhil3-q1m7i2 , rhil3-q1m7n3 , rhil3-q1m7q9 , rhil3-q1m7r8 , rhil3-q1m8d0 , rhil3-q1m8u4 , rhil3-q1m9d6 , rhil3-q1m9i6 , rhil3-q1m347 , rhil3-q1m571 , rhil3-q1m580 , rhil3-q1m672 , rhil3-q1m812 , rhil3-q1m841 , rhil3-q1m917 , rhil3-q1m919 , rhil3-q1mbv4 , rhil3-q1mbz5 , rhil3-q1mc48 , rhil3-q1mcr4 , rhil3-q1md19 , rhil3-q1mdd8 , rhil3-q1me05 , rhil3-q1mee4 , rhil3-q1mel6 , rhil3-q1men7 , rhil3-q1mf17 , rhil3-q1mf73 , rhil3-q1mf76 , rhil3-q1mfb0 , rhil3-q1mfp5 , rhil3-q1mg17 , rhil3-q1mg51 , rhil3-q1mg97 , rhil3-q1mgh3 , rhil3-q1mgh5 , rhil3-q1mgu7 , rhil3-q1mgx5 , rhil3-q1mh67 , rhil3-q1mhh7 , rhil3-q1mhz8 , rhil3-q1mi67 , rhil3-q1mi98 , rhil3-q1mia3 , rhil3-q1mig2 , rhil3-q1miz0 , rhil3-q1mj26 , rhil3-q1mj65 , rhil3-q1mjs2 , rhil3-q1mjx4 , rhil3-q1mk84 , rhil3-q1mkk8 , rhil3-q1mli7 , rhil3-q1mlj7 , rhil3-q1mm33 , rhil3-q1mmf9 , rhil3-q1mmp7 , rhil3-q1mmx0 , rhil3-q1mn42 , rhile-Q93EA8 , rhils-c6axl5 , rhils-c6b1w7 , rhilw-b5zrm4 , rhilw-b5zs97 , rhilv-j0vcs5

Title : Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction - Sebaihia_2006_J.Bacteriol_188_6002
Author(s) : Sebaihia M , Preston A , Maskell DJ , Kuzmiak H , Connell TD , King ND , Orndorff PE , Miyamoto DM , Thomson NR , Harris D , Goble A , Lord A , Murphy L , Quail MA , Rutter S , Squares R , Squares S , Woodward J , Parkhill J , Temple LM
Ref : Journal of Bacteriology , 188 :6002 , 2006
PubMedID: 16885469
Gene_locus related to this paper: bora1-q2kti1 , bora1-q2ktw2 , bora1-q2ku63 , bora1-q2kun8 , bora1-q2kuu7 , bora1-q2kuz2 , bora1-q2kv84 , bora1-q2kvg3 , bora1-q2kw07 , bora1-q2kw58 , bora1-q2kwy4 , bora1-q2kxl0 , bora1-q2kxn8 , bora1-q2kxw5 , bora1-q2kxz8 , bora1-q2kyw6 , bora1-q2kzr8 , bora1-q2kzt4 , bora1-q2kzx4 , bora1-q2l0h1 , bora1-q2l0h9 , bora1-q2l0p4 , bora1-q2l1n9 , bora1-q2l1v4 , bora1-q2l1z1 , bora1-q2l122 , bora1-q2l209

Title : Escherichia coli K-12: a cooperatively developed annotation snapshot--2005 - Riley_2006_Nucleic.Acids.Res_34_1
Author(s) : Riley M , Abe T , Arnaud MB , Berlyn MK , Blattner FR , Chaudhuri RR , Glasner JD , Horiuchi T , Keseler IM , Kosuge T , Mori H , Perna NT , Plunkett G, 3rd , Rudd KE , Serres MH , Thomas GH , Thomson NR , Wishart D , Wanner BL
Ref : Nucleic Acids Research , 34 :1 , 2006
PubMedID: 16397293
Gene_locus related to this paper: ecoli-dlhh , ecoli-pldb

Title : The genome of the heartwater agent Ehrlichia ruminantium contains multiple tandem repeats of actively variable copy number - Collins_2005_Proc.Natl.Acad.Sci.U.S.A_102_838
Author(s) : Collins NE , Liebenberg J , de Villiers EP , Brayton KA , Louw E , Pretorius A , Faber FE , van Heerden H , Josemans A , van Kleef M , Steyn HC , van Strijp MF , Zweygarth E , Jongejan F , Maillard JC , Berthier D , Botha M , Joubert F , Corton CH , Thomson NR , Allsopp MT , Allsopp BA
Ref : Proc Natl Acad Sci U S A , 102 :838 , 2005
PubMedID: 15637156
Gene_locus related to this paper: ehrrg-q5fg02 , ehrrg-q5fga6

Title : The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation - Thomson_2005_Genome.Res_15_629
Author(s) : Thomson NR , Yeats C , Bell K , Holden MT , Bentley SD , Livingstone M , Cerdeno-Tarraga AM , Harris B , Doggett J , Ormond D , Mungall K , Clarke K , Feltwell T , Hance Z , Sanders M , Quail MA , Price C , Barrell BG , Parkhill J , Longbottom D
Ref : Genome Res , 15 :629 , 2005
PubMedID: 15837807
Gene_locus related to this paper: chlab-q5l5y2 , chlab-q5l6t6

Title : Genomic plasticity of the causative agent of melioidosis, Burkholderia pseudomallei - Holden_2004_Proc.Natl.Acad.Sci.U.S.A_101_14240
Author(s) : Holden MT , Titball RW , Peacock SJ , Cerdeno-Tarraga AM , Atkins T , Crossman LC , Pitt T , Churcher C , Mungall K , Bentley SD , Sebaihia M , Thomson NR , Bason N , Beacham IR , Brooks K , Brown KA , Brown NF , Challis GL , Cherevach I , Chillingworth T , Cronin A , Crossett B , Davis P , DeShazer D , Feltwell T , Fraser A , Hance Z , Hauser H , Holroyd S , Jagels K , Keith KE , Maddison M , Moule S , Price C , Quail MA , Rabbinowitsch E , Rutherford K , Sanders M , Simmonds M , Songsivilai S , Stevens K , Tumapa S , Vesaratchavest M , Whitehead S , Yeats C , Barrell BG , Oyston PC , Parkhill J
Ref : Proc Natl Acad Sci U S A , 101 :14240 , 2004
PubMedID: 15377794
Gene_locus related to this paper: burma-a5j5w8 , burma-a5tj72 , burma-a5tq93 , burma-metx , burma-q62a61 , burma-q62ar2.1 , burma-q62ar2.2 , burma-q62ax8 , burma-q62b60 , burma-q62b79 , burma-q62bh9 , burma-q62bl4 , burma-q62bl7 , burma-q62c00 , burma-q62cg5 , burma-q62d41 , burma-q62d56 , burma-q62d83 , burma-q62dg2 , burma-q62du7 , burma-q62e67 , burma-q62eb8 , burma-q62ed8 , burma-q62f28 , burma-q62fx7 , burma-q62g26 , burma-q62gx9 , burma-q62gy2 , burma-q62hq2 , burma-q62i62 , burma-q62ib8 , burma-q62ie8 , burma-q62j07 , burma-q62j15 , burma-q62jn5 , burma-q62jy7 , burma-q62kb7 , burma-q62kg0 , burma-q62kh9 , burma-q62lp7 , burma-q62m40 , burma-q62mc3 , burma-q62mf4 , burma-q62mq7 , burma-q629m1 , burma-q629p4 , burma-q629u0 , burp1-q3jvq2 , burps-a4lm41 , burps-q3v7s4 , burps-q63hx2 , burps-q63i95 , burps-q63im5 , burps-q63is4 , burps-q63ja6 , burps-q63ja9 , burps-q63jh5 , burps-q63l17 , burps-q63l41 , burps-q63l44 , burps-q63lt9 , burps-q63me1 , burps-q63mj7 , burps-q63mj8 , burps-q63mn8 , burps-q63mr2 , burps-q63n52 , burps-q63p18 , burps-q63p99 , burps-q63ug2 , burps-q63ug5 , burps-q63xf9 , burps-q63y36 , burps-q63y45 , burps-q63y52 , burps-q63y59 , burta-q2t474 , burps-hboh