Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: ailme-g1lkt7

Ailuropoda melanoleuca (Giant panda). Phospholipase A1 member A

Relationship
Family|Phospholipase
Block| L
Position in NCBI Life Tree|Ailuropoda melanoleuca
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Laurasiatheria: N E > Carnivora: N E > Caniformia: N E > Ursidae: N E > Ailuropoda: N E > Ailuropoda melanoleuca: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : ACTA01168679, GL192422
2 UniProt : G1LKT7, D2H195
2 UniProt : G1LKT7, D2H195
2 Interpro : G1LKT7, D2H195
2 Prodom : G1LKT7, D2H195
2 Pfam : G1LKT7, D2H195
2 PIRSF : G1LKT7, D2H195
2 SUPERFAM : G1LKT7, D2H195
Sequence
Graphical view for this peptide sequence: ailme-g1lkt7
Colored MSA for Phospholipase (raw)
MPPGLWERHLCSWGLLLWLSIGSAGDAPSTPQKMCTDFQNVNLLQGTNLK
VQFLLFTPLDPSCGKLVQENSDIQNSGFNATLGTKLLIHGFRALGTKPSW
IDKFIGTLLRAANANVIAVDWVYGSTGVYFSAVGNVVKLGLEISRFLRKL
LELGVPESSIHIIGVSLGAHVGGIVGHLYKGQLGRITAGLDPAGPEYTKA
SLEERLDPGDALFVEAIHTDADNLGIRIPVGHVDYFVNGGQDQPGCPTFI
HAGYSYLICDHMRAVHLYISALENSCPFVAFPCVNYKAFLAGQCLDCFNP
FLLSCPRIGLMEQSSVKIEPLPKEVKVFLLTTAQAPYCVHHSLVEFYLQE
PRNKDTLISITFLSSNVTSLAKITIPRQELQGKGETPPPPPPPPPIHPHG
LILTLESQRGWRVAGVWVSNRDMAHIFTTFSTSRFPIQYNKKMVCFPEPV
TLQASVTVSFDLKITCV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPPGLWERHLCSWGLLLWLSIGSAGDAPSTPQKMCTDFQNVNLLQGTNLK
VQFLLFTPLDPSCGKLVQENSDIQNSGFNATLGTKLLIHGFRALGTKPSW
IDKFIGTLLRAANANVIAVDWVYGSTGVYFSAVGNVVKLGLEISRFLRKL
LELGVPESSIHIIGVSLGAHVGGIVGHLYKGQLGRITAGLDPAGPEYTKA
SLEERLDPGDALFVEAIHTDADNLGIRIPVGHVDYFVNGGQDQPGCPTFI
HAGYSYLICDHMRAVHLYISALENSCPFVAFPCVNYKAFLAGQCLDCFNP
FLLSCPRIGLMEQSSVKIEPLPKEVKVFLLTTAQAPYCVHHSLVEFYLQE
PRNKDTLISITFLSSNVTSLAKITIPRQELQGKGETPPPPPPPPPIHPHG
LILTLESQRGWRVAGVWVSNRDMAHIFTTFSTSRFPIQYNKKMVCFPEPV
TLQASVTVSFDLKITCV


Reference
    Title: The sequence and de novo assembly of the giant panda genome
    Li R, Fan W, Tian G, Zhu H, He L, Cai J, Huang Q, Cai Q, Li B and Yang H <103 more author(s)>
    Ref: Nature, 463:311, 2010 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer