Gene_locus Report for: brafl-c3zf44 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein
Comment
gene 171050 C3ZF46 (oldB6LI83) and C3ZF45 206538 (old B6LI84) are repeat of the begining of sequence of 70885 C3ZF44 (old B6LI85) Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Cephalochordata: N E > Branchiostomidae: N E > Branchiostoma: N E > Branchiostoma floridae: N E A85-EsteraseD-FGH :
brafl-c3yk61 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
ABHD6-Lip :
brafl-c3zci7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zlg0 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zlg2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zlg3 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
ABHD10 :
brafl-c3zj72 Branchiostoma floridae (Florida lancelet) (Amphioxus). Uncharacterized protein .
ABHD11-Acetyl_transferase :
brafl-c3z474 Branchiostoma floridae (Florida lancelet) (Amphioxus). AB hydrolase-1 domain-containing protein .
ABHD12-PHARC :
brafl-c3xr79 Branchiostoma floridae (Florida lancelet) (Amphioxus). Putative uncharacterized protein .
ABHD13-BEM46 :
brafl-c3zqr8 Branchiostoma floridae (Florida lancelet) (Amphioxus). AB hydrolase-1 domain-containing protein .
ABHD18 :
brafl-c3xyt7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
abh_upf0017 :
brafl-c3xvw5 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y1p9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ymu0 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
ACHE :
brafl-ACHE1 Branchiostoma floridae (Florida lancelet) (Amphioxus) cholinesterase 1 (ChE1) ,
brafl-ACHE2 Branchiostoma floridae (Florida lancelet) (Amphioxus) cholinesterase 2 (ChE2) ,
brafl-ACHEA Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-ACHEB Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yne9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Acidic_Lipase :
brafl-c3xzy1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein Dhrs7C ,
brafl-c3xzy2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Lipase ,
brafl-c3zxg2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zxq3 Branchiostoma floridae (Florida lancelet) (Amphioxus) Lipase .
Arylacetamide_deacetylase :
brafl-c3y7r2 Branchiostoma floridae (Florida lancelet) (Amphioxus). Putative uncharacterized protein ,
brafl-c3yj62 Branchiostoma floridae (Florida lancelet) (Amphioxus). Putative uncharacterized protein ,
brafl-c3zg22 Branchiostoma floridae (Florida lancelet) (Amphioxus). Putative uncharacterized protein .
BD-FAE :
brafl-c3z5c8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Carb_B_Chordata :
brafl-c3xqm2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xx27 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xx28 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xx30 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xx32 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xx36 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xx38 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xx39 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xx40 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xx41 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y7d7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y7s1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y8v8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y8w1.1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein probably pseudogene ,
brafl-c3y8w2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein incomplete ,
brafl-c3yan2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yc67 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yfm5 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ygc7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ygc9.1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ygd0 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ygd1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ygd2.1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ygd4 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ys59 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yv27 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3z1u9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3z1v0 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3z139 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zbr4 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ziv7.1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ziv7.2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3znl2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zqg7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zqz2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
CGI-58_ABHD5_ABHD4 :
brafl-c3yi63 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yi64 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yi67 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yi68 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yi69 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yla7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Chlorophyllase_Plant :
brafl-c3xyd7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xyd8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xyd9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xye0 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Cholinesterase-like :
brafl-c3xut6 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xut7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y4l1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y6v9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y6y4 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y8k5 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein old b6lf84 b6lf83 b6lf82 b6lf81 new c3y8k5 c3y8k3 ,
brafl-c3y8t3 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y8t4 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y8t5 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yfz8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yxb9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3z3n7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3z066 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3z975 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zab8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zab9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zd14 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zer1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zmv1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zmv2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3znd6 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zv54 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zvv1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
CMBL :
brafl-c3yde6 Branchiostoma floridae (Florida lancelet) (Amphioxus). DLH domain-containing protein .
DPP4N_Peptidase_S9 :
brafl-c3ydm8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yyq5 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yz04 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Epoxide_hydrolase :
brafl-c3y9y3 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3z1c7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Haloalkane_dehalogenase-HLD2 :
brafl-c3xxt9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
LIDHydrolase :
brafl-c3yr72 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Maspardin-ACP33-SPG21_like :
brafl-c3y1t3 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
MEST-like :
brafl-c3ylp9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ylq0 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ylq1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Monoglyceridelipase_lysophospholip :
brafl-c3zfs6 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zfs5 Branchiostoma floridae (Florida lancelet) (Amphioxus). Putative uncharacterized protein ,
brafl-c3zfs3 Branchiostoma floridae (Florida lancelet) (Amphioxus). Putative uncharacterized protein .
Ndr_family :
brafl-c3yim2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Neuroligin :
brafl-c3xqm5 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y9i7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y9i8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3y9l9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yaw4 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ybw7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yx17 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yx19 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3yxi7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3z9f4 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zf47 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zf48 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zli5 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zs46 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zs49 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zs56 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zwz6 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
NLS3-Tex30 :
brafl-c3ygr1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Pancreatic_lipase :
brafl-c3y2t9 Branchiostoma floridae (Florida lancelet) (Amphioxus). Uncharacterized protein ,
brafl-c3y2u0 Branchiostoma floridae (Florida lancelet) (Amphioxus). Uncharacterized protein ,
brafl-c3ycg1 Branchiostoma floridae (Florida lancelet) (Amphioxus). Uncharacterized protein ,
brafl-c3ycg2 Branchiostoma floridae (Florida lancelet) (Amphioxus). Uncharacterized protein ,
brafl-c3ycg4 Branchiostoma floridae (Florida lancelet) (Amphioxus). Uncharacterized protein ,
brafl-c3z1l3 Branchiostoma floridae (Florida lancelet) (Amphioxus). Uncharacterized protein ,
brafl-c3zn71 Branchiostoma floridae (Florida lancelet) (Amphioxus). Uncharacterized protein .
Pectinacetylesterase-Notum :
brafl-c3xtl0 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3xtl1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ykb2 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ywf1 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zhm6 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zme7 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zme8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
PhoPQ_related :
brafl-c3yra8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zmp8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
PMH_Peptidase_S9 :
brafl-c3y087 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
Prolylcarboxypeptidase :
brafl-c3y2u3 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ypm6 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3ywh9 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein ,
brafl-c3zcy8 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein .
SERHL :
brafl-c3yf35 Branchiostoma floridae (Florida lancelet) (Amphioxus). Uncharacterized protein .
Valacyclovir-hydrolase :
brafl-c3ygg6 Branchiostoma floridae (Florida lancelet) (Amphioxus) Putative uncharacterized protein Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: brafl-c3zf44 Colored MSA for Neuroligin (raw)
MDSMWVTSAVLTWILMTASADSNSGEVITTKYGSFRGRQVPPPKDRMRAV
NKYLGIPYAKPPVGNLRFRPPQEPEAWDKGKVRDFTKFGPVCPQIVASGD
TDLPSAVQTREAMRPFLQTMDEDCLYLNIYSPVINGPALDERYPLAVLVF
IHGGGYTTGTGNAYDGTVLASHGSVVVVTINYRLGVLGFLSMEDKFASGN
YGLLDQISALDWISENIRHFGGDPTRVTLVGFGAGAACVNLLALSPKAAG
KFRRAIIQSGSALGTGAITEDSRHYATMLAEKLDCCRPDAAQTVQCLRNK
PYQELLLKNMTPPSSSYYAMFGPSVDGVVVPDQPRRLLEGDLFRSYDFMV
GLSEEDGYKYIPSIAVIENGLSDDDYRNLISDFVNQVFPYRENEIQDAIL
FLYTNWGNDTNETRRAGVVRMLTEQQIAVPIVEVANLHSTKNTESSTYMY
SYSYKAINTPNPKWVGAVHGDELPFMFGAPVAPRGIFQQLNFTKGESMLS
VAMMTYWSNFAKTGDPQQPRVQATTFLHERPNKFENIQWTQYSIDNCSNC
QETYLYLGMKPRVVEGFRPQRIAFWIELVPKLLYPQEVPSNNYLYPPEDA
DELCQILDIGQTILTGGGLAVRRPDGWTKPSVGVTGSSTTCISILPTSAS
PSQFPGNSVPGLTGEWQPESTGSNVSSQEKGQNYSELSIVIAVGTSLLVV
NVIVFAVCYKRGRARTKRHKETETRERIRLKVTDVREVLKAYEIAESCGS
SPCQTLEIIALKDERIENCAKFQEKGDIL
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M D S M W V T S A V L T W I L M T A S A D S N S G E V I T T K Y G S F R G R Q V P P P K D R M R A V N K Y L G I P Y A K P P V G N L R F R P P Q E P E A W D K G K V R D F T K F G P V C P Q I V A S G D T D L P S A V Q T R E A M R P F L Q T M D E D C L Y L N I Y S P V I N G P A L D E R Y P L A V L V F I H G G G Y T T G T G N A Y D G T V L A S H G S V V V V T I N Y R L G V L G F L S M E D K F A S G N Y G L L D Q I S A L D W I S E N I R H F G G D P T R V T L V G F G A G A A C V N L L A L S P K A A G K F R R A I I Q S G S A L G T G A I T E D S R H Y A T M L A E K L D C C R P D A A Q T V Q C L R N K P Y Q E L L L K N M T P P S S S Y Y A M F G P S V D G V V V P D Q P R R L L E G D L F R S Y D F M V G L S E E D G Y K Y I P S I A V I E N G L S D D D Y R N L I S D F V N Q V F P Y R E N E I Q D A I L F L Y T N W G N D T N E T R R A G V V R M L T E Q Q I A V P I V E V A N L H S T K N T E S S T Y M Y S Y S Y K A I N T P N P K W V G A V H G D E L P F M F G A P V A P R G I F Q Q L N F T K G E S M L S V A M M T Y W S N F A K T G D P Q Q P R V Q A T T F L H E R P N K F E N I Q W T Q Y S I D N C S N C Q E T Y L Y L G M K P R V V E G F R P Q R I A F W I E L V P K L L Y P Q E V P S N N Y L Y P P E D A D E L C Q I L D I G Q T I L T G G G L A V R R P D G W T K P S V G V T G S S T T C I S I L P T S A S P S Q F P G N S V P G L T G E W Q P E S T G S N V S S Q E K G Q N Y S E L S I V I A V G T S L L V V N V I V F A V C Y K R G R A R T K R H K E T E T R E R I R L K V T D V R E V L K A Y E I A E S C G S S P C Q T L E I I A L K D E R I E N C A K F Q E K G D I L
Reference
Title: The amphioxus genome and the evolution of the chordate karyotypePutnam NH , Butts T , Ferrier DE , Furlong RF , Hellsten U , Kawashima T , Robinson-Rechavi M , Shoguchi E , Terry A and Rokhsar DS <27 more author(s)> Putnam NH , Butts T , Ferrier DE , Furlong RF , Hellsten U , Kawashima T , Robinson-Rechavi M , Shoguchi E , Terry A , Yu JK , Benito-Gutierrez EL , Dubchak I , Garcia-Fernandez J , Gibson-Brown JJ , Grigoriev IV , Horton AC , de Jong PJ , Jurka J , Kapitonov VV , Kohara Y , Kuroki Y , Lindquist E , Lucas S , Osoegawa K , Pennacchio LA , Salamov AA , Satou Y , Sauka-Spengler T , Schmutz J , Shin IT , Toyoda A , Bronner-Fraser M , Fujiyama A , Holland LZ , Holland PW , Satoh N , Rokhsar DS (- 27) Ref: Nature, 453 :1064, 2008 : PubMed Abstract ESTHER: Putnam_2008_Nature_453_1064 PubMedSearch: Putnam 2008 Nature 453 1064 PubMedID: 18563158 Gene_locus related to this paper: brafl-ACHE1 ,
brafl-ACHE2 ,
brafl-ACHEA ,
brafl-ACHEB ,
brafl-c3xqm2 ,
brafl-c3xqm5 ,
brafl-c3xtl0 ,
brafl-c3xtl1 ,
brafl-c3xut6 ,
brafl-c3xut7 ,
brafl-c3xvw5 ,
brafl-c3xx27 ,
brafl-c3xx28 ,
brafl-c3xx30 ,
brafl-c3xx32 ,
brafl-c3xx36 ,
brafl-c3xx38 ,
brafl-c3xx39 ,
brafl-c3xx40 ,
brafl-c3xx41 ,
brafl-c3xxt9 ,
brafl-c3xyd7 ,
brafl-c3xyd8 ,
brafl-c3xyd9 ,
brafl-c3xye0 ,
brafl-c3xyt7 ,
brafl-c3xzy1 ,
brafl-c3xzy2 ,
brafl-c3y1p9 ,
brafl-c3y1t3 ,
brafl-c3y2u3 ,
brafl-c3y4l1 ,
brafl-c3y6v9 ,
brafl-c3y6y4 ,
brafl-c3y7d7 ,
brafl-c3y7s1 ,
brafl-c3y8k5 ,
brafl-c3y8t3 ,
brafl-c3y8t4 ,
brafl-c3y8t5 ,
brafl-c3y8v8 ,
brafl-c3y8w1.1 ,
brafl-c3y8w2 ,
brafl-c3y9i7 ,
brafl-c3y9i8 ,
brafl-c3y9l9 ,
brafl-c3y9y3 ,
brafl-c3y087 ,
brafl-c3yan2 ,
brafl-c3yaw4 ,
brafl-c3ybw7 ,
brafl-c3yc67 ,
brafl-c3ydm8 ,
brafl-c3yfm5 ,
brafl-c3yfz8 ,
brafl-c3ygc7 ,
brafl-c3ygc9.1 ,
brafl-c3ygd0 ,
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brafl-c3yk61 ,
brafl-c3ykb2 ,
brafl-c3yla7 ,
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brafl-c3ylq0 ,
brafl-c3ylq1 ,
brafl-c3ymu0 ,
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brafl-c3yr72 ,
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brafl-c3yx19 ,
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brafl-c3z3n7 ,
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brafl-c3ziv7.1 ,
brafl-c3ziv7.2 ,
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brafl-c3zlg2 ,
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brafl-c3znl2 ,
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brafl-c3zs46 ,
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brafl-c3zv54 ,
brafl-c3zvv1 ,
brafl-c3zwz6 ,
brafl-c3zxg2 ,
brafl-c3zxq3 ,
brafl-c3yim2 ,
brafl-c3zfs5 ,
brafl-c3zfs3 ,
brafl-c3xr79 ,
brafl-c3y7r2 ,
brafl-c3yj62 ,
brafl-c3zg22 ,
brafl-c3y2t9 ,
brafl-c3y2u0 ,
brafl-c3ycg1 ,
brafl-c3ycg2 ,
brafl-c3ycg4 ,
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brafl-c3z474 ,
brafl-c3zqr8 ,
brafl-c3yde6 Abstract
Lancelets ('amphioxus') are the modern survivors of an ancient chordate lineage, with a fossil record dating back to the Cambrian period. Here we describe the structure and gene content of the highly polymorphic approximately 520-megabase genome of the Florida lancelet Branchiostoma floridae, and analyse it in the context of chordate evolution. Whole-genome comparisons illuminate the murky relationships among the three chordate groups (tunicates, lancelets and vertebrates), and allow not only reconstruction of the gene complement of the last common chordate ancestor but also partial reconstruction of its genomic organization, as well as a description of two genome-wide duplications and subsequent reorganizations in the vertebrate lineage. These genome-scale events shaped the vertebrate genome and provided additional genetic variation for exploitation during vertebrate evolution.
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