Gene_Locus Report

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Gene_locus Report for: drogr-b4j6e6

Drosophila grimshawi (Fruit fly) (Idiomyia grimshawi) GH21718

Relationship
Family|OtherNon-catalytic_C
Block| C
Position in NCBI Life Tree|Drosophila grimshawi
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Brachycera: N E > Muscomorpha: N E > Eremoneura: N E > Cyclorrhapha: N E > Schizophora: N E > Acalyptratae: N E > Ephydroidea: N E > Drosophilidae: N E > Drosophilinae: N E > Drosophilini: N E > Drosophila [fruit fly, genus]: N E > Hawaiian Drosophila: N E > picture wing clade: N E > grimshawi clade: N E > grimshawi group: N E > grimshawi subgroup: N E > Drosophila grimshawi: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CH916367
1 UniProt : B4J6E6
1 UniProt : B4J6E6
1 Interpro : B4J6E6
1 Pfam : B4J6E6
1 PIRSF : B4J6E6
1 SUPERFAM : B4J6E6
Sequence
Graphical view for this peptide sequence: drogr-b4j6e6
Colored MSA for OtherNon-catalytic_C (raw)
MWLRNLFFAFVFYINYNFLYMCVNSVDAPFIHIPGNGIVSGTYLKMYRTQ
NIKAYLGIRYAHAARFSPPDIELPPWKGIFNATKFAANCWQQGPSSSNVQ
LDKVLEIISGGMFNKSAMRKYEENCLHLNVFVPDGLPEVDGYAVIVWIHS
GNFSTGSPFDIDPFQLVFKQKVIVVTFSYRLNIFGFFSTDDGEAQGNYGL
MDQSAALYWVKKNINYFGGDENRITLMGHDAGAVSAALHMTSGEWSKGAF
HKAILMSGNPLTPIRLPQEFNNDLDRIASVFGCARRPTSLLMQCLKRIDA
RVLAENLPASIEWGPIVDFGLSNTSYPFIESQPEMLFKSGNYHKVPIIIG
ITDMEEVLTIFNDYLSLELSADDLKNFFADIAVNDIHKISGNNEWCTNFP
IISDAIDFMYTDKGSEENGNINTNLINAHTEKSYIMPLEMFIDLLSKHQS
IYSYIFRYRSQSLSGDLPNWIGVPKYFDQIFVWGIPYVNNIVEWKSTDKK
MADIVMTLWANFAKTSNPTKANVYVKWSAITPPKYPYLSIDENFNTDYLS
NNQKVKFWKNLYPKILHFATECCNSTNSATKYLMTYTIYFTLHIYIF
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MWLRNLFFAFVFYINYNFLYMCVNSVDAPFIHIPGNGIVSGTYLKMYRTQ
NIKAYLGIRYAHAARFSPPDIELPPWKGIFNATKFAANCWQQGPSSSNVQ
LDKVLEIISGGMFNKSAMRKYEENCLHLNVFVPDGLPEVDGYAVIVWIHS
GNFSTGSPFDIDPFQLVFKQKVIVVTFSYRLNIFGFFSTDDGEAQGNYGL
MDQSAALYWVKKNINYFGGDENRITLMGHDAGAVSAALHMTSGEWSKGAF
HKAILMSGNPLTPIRLPQEFNNDLDRIASVFGCARRPTSLLMQCLKRIDA
RVLAENLPASIEWGPIVDFGLSNTSYPFIESQPEMLFKSGNYHKVPIIIG
ITDMEEVLTIFNDYLSLELSADDLKNFFADIAVNDIHKISGNNEWCTNFP
IISDAIDFMYTDKGSEENGNINTNLINAHTEKSYIMPLEMFIDLLSKHQS
IYSYIFRYRSQSLSGDLPNWIGVPKYFDQIFVWGIPYVNNIVEWKSTDKK
MADIVMTLWANFAKTSNPTKANVYVKWSAITPPKYPYLSIDENFNTDYLS
NNQKVKFWKNLYPKILHFATECCNSTNSATKYLMTYTIYFTLHIYIF


References
    Title: Assembly reconciliation
    Zimin AV, Smith DR, Sutton G, Yorke JA
    Ref: Bioinformatics, 24:42, 2008 : PubMed

            

    Title: Evolution of genes and genomes on the Drosophila phylogeny
    Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W and MacCallum I <405 more author(s)>
    Ref: Nature, 450:203, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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