Gene_Locus Report

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Gene_locus Report for: rabit-g1tzq7

Oryctolagus cuniculus (Rabbit). Uncharacterized protein

Relationship
Family|Arylacetamide_deacetylase
Block| H
Position in NCBI Life Tree|Oryctolagus cuniculus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Glires: N E > Lagomorpha: N E > Leporidae: N E > Oryctolagus: N E > Oryctolagus cuniculus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 UniProt : G1TZQ7
1 UniProt : G1TZQ7
1 Interpro : G1TZQ7
1 Prodom : G1TZQ7
1 Pfam : G1TZQ7
1 PIRSF : G1TZQ7
1 SUPERFAM : G1TZQ7
Sequence
Graphical view for this peptide sequence: rabit-g1tzq7
Colored MSA for Arylacetamide_deacetylase (raw)
TMLSWLAVLLAAVCVLSLGVNSWVLREHCLTTEIPSTISHPLKLWTLYYA
FLLLVTWGEIFEMLGICTMFKFIRFLHDLLPIRKDPQVAVTNLRFGSVPV
RLFQPKAPSSRPRRGIIFYHGGGSVFGSLDFYHNLCSFLARETDSVLLLV
GYRKLPEYHSPIITKDCLNASIHFLKALDTYGVDPARVVLCGESIGGGAV
AVTTQSLVGRPDLPRIRAQVLIYPVIQVVNLQLPSFRQNQNVPLLTGKFT
ARLMCRYMNIHRSWNRALLTGAFIPPEAWSKYKKWLSSDNIPKRFKTKTH
QPCFPAPFNEAAYLEMKHLLDVENCPLLAEDEVIAQLPEAFVVSCENDIL
RDDALLYRKRLEDQGVPVTWHHAEDGFHGSVILFDKKHLSFPCSQEIMNA
VVCYIKGI
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

TMLSWLAVLLAAVCVLSLGVNSWVLREHCLTTEIPSTISHPLKLWTLYYA
FLLLVTWGEIFEMLGICTMFKFIRFLHDLLPIRKDPQVAVTNLRFGSVPV
RLFQPKAPSSRPRRGIIFYHGGGSVFGSLDFYHNLCSFLARETDSVLLLV
GYRKLPEYHSPIITKDCLNASIHFLKALDTYGVDPARVVLCGESIGGGAV
AVTTQSLVGRPDLPRIRAQVLIYPVIQVVNLQLPSFRQNQNVPLLTGKFT
ARLMCRYMNIHRSWNRALLTGAFIPPEAWSKYKKWLSSDNIPKRFKTKTH
QPCFPAPFNEAAYLEMKHLLDVENCPLLAEDEVIAQLPEAFVVSCENDIL
RDDALLYRKRLEDQGVPVTWHHAEDGFHGSVILFDKKHLSFPCSQEIMNA
VVCYIKGI


Reference
    Title: A high-resolution map of human evolutionary constraint using 29 mammals
    Lindblad-Toh K, Garber M, Zuk O, Lin MF, Parker BJ, Washietl S, Kheradpour P, Ernst J, Jordan G and Kellis M <76 more author(s)>
    Ref: Nature, 478:476, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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