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Heiman D

References (5)

Title : Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses - O'Connell_2012_Nat.Genet_44_1060
Author(s) : O'Connell RJ , Thon MR , Hacquard S , Amyotte SG , Kleemann J , Torres MF , Damm U , Buiate EA , Epstein L , Alkan N , Altmuller J , Alvarado-Balderrama L , Bauser CA , Becker C , Birren BW , Chen Z , Choi J , Crouch JA , Duvick JP , Farman MA , Gan P , Heiman D , Henrissat B , Howard RJ , Kabbage M , Koch C , Kracher B , Kubo Y , Law AD , Lebrun MH , Lee YH , Miyara I , Moore N , Neumann U , Nordstrom K , Panaccione DG , Panstruga R , Place M , Proctor RH , Prusky D , Rech G , Reinhardt R , Rollins JA , Rounsley S , Schardl CL , Schwartz DC , Shenoy N , Shirasu K , Sikhakolli UR , Stuber K , Sukno SA , Sweigard JA , Takano Y , Takahara H , Trail F , van der Does HC , Voll LM , Will I , Young S , Zeng Q , Zhang J , Zhou S , Dickman MB , Schulze-Lefert P , Ver Loren van Themaat E , Ma LJ , Vaillancourt LJ
Ref : Nat Genet , 44 :1060 , 2012
Abstract :
PubMedSearch : O'Connell_2012_Nat.Genet_44_1060
PubMedID: 22885923
Gene_locus related to this paper: colgm-kex1 , colhi-h1vve5 , colhi-h1vkk5 , colgm-e3qtg4 , colhi-h1vbq5 , colgm-e3qyh7 , colgm-e3q7u5 , colhi-h1vs61 , colgm-e3qip4 , colgm-e3qv97 , colhi-h1v665 , colgm-e3qky4 , colhi-h1vd91 , colhi-h1uvl1 , colhi-h1v7k5 , colgm-e3qu96 , colhi-h1vhh1 , colhi-h1v638 , colhi-h1vcz3 , colgm-e3qwt6 , colgm-e3q3z6 , colhi-h1vmh6 , colgm-e3qqq8 , colhi-h1v0e8 , colgm-e3qyt9 , colgm-e3qby6 , colgm-e3qsm5 , colgm-e3q6f6 , colgm-e3qwt4 , colgm-e3qb89 , colhi-h1vh96 , colgm-e3qwz9 , colgm-e3qbd3 , colgm-e3qtz0 , colhi-h1w5n4 , colgm-e3q7y3 , colgm-e3qpz1 , colhi-h1v2e4 , colgm-e3qux5 , colgm-e3qx16 , colgm-cbpya , colgm-e3q8b3

Title : Comparative genome analysis of Trichophyton rubrum and related dermatophytes reveals candidate genes involved in infection - Martinez_2012_MBio_3_e00259
Author(s) : Martinez DA , Oliver BG , Graser Y , Goldberg JM , Li W , Martinez-Rossi NM , Monod M , Shelest E , Barton RC , Birch E , Brakhage AA , Chen Z , Gurr SJ , Heiman D , Heitman J , Kosti I , Rossi A , Saif S , Samalova M , Saunders CW , Shea T , Summerbell RC , Xu J , Young S , Zeng Q , Birren BW , Cuomo CA , White TC
Ref : MBio , 3 :e00259 , 2012
Abstract :
PubMedSearch : Martinez_2012_MBio_3_e00259
PubMedID: 22951933
Gene_locus related to this paper: artgp-e4uup9 , artgp-e4v450 , artgp-e5qzf5 , artgp-e5r1t8 , artoc-c5fc55 , artoc-c5fds1 , artoc-c5fig8 , artoc-c5fj58 , artoc-c5fme4 , artoc-c5fva9 , triec-f2ph15 , triec-f2plk8 , triec-f2pwm2 , trirc-f2sf42 , trirc-f2sn39 , trirc-f2srv5 , trirc-f2sy06 , triru-q5j6j0 , triru-SCPB , triru-SPCA , trit1-f2rna8 , trit1-f2s2t8 , trivh-d4dbr9 , artbc-d4avu9 , artoc-c5fsf7 , artgp-e4unv7 , artoc-c5g0v3 , triec-f2pub4 , triec-f2pi43 , artgp-e4v6t4 , trit1-f2s3n3 , artoc-c5fnl7 , artgp-e4upq1 , artgp-e4uzl7 , triec-f2pp24 , triru-a0a022u299 , 9euro-a0a059jk56 , artoc-c5fu24 , artoc-c5fic4 , artgp-e4uza8 , triec-f2pqf3 , artgp-e4uv28 , artoc-c5fiv8 , triru-a0a022w2d0 , artgp-e4uvk8 , triru-a0a178f289 , artoc-c5fyj1 , artoc-cbpya , artoc-kex1

Title : A high-resolution map of human evolutionary constraint using 29 mammals - Lindblad-Toh_2011_Nature_478_476
Author(s) : Lindblad-Toh K , Garber M , Zuk O , Lin MF , Parker BJ , Washietl S , Kheradpour P , Ernst J , Jordan G , Mauceli E , Ward LD , Lowe CB , Holloway AK , Clamp M , Gnerre S , Alfoldi J , Beal K , Chang J , Clawson H , Cuff J , Di Palma F , Fitzgerald S , Flicek P , Guttman M , Hubisz MJ , Jaffe DB , Jungreis I , Kent WJ , Kostka D , Lara M , Martins AL , Massingham T , Moltke I , Raney BJ , Rasmussen MD , Robinson J , Stark A , Vilella AJ , Wen J , Xie X , Zody MC , Baldwin J , Bloom T , Chin CW , Heiman D , Nicol R , Nusbaum C , Young S , Wilkinson J , Worley KC , Kovar CL , Muzny DM , Gibbs RA , Cree A , Dihn HH , Fowler G , Jhangiani S , Joshi V , Lee S , Lewis LR , Nazareth LV , Okwuonu G , Santibanez J , Warren WC , Mardis ER , Weinstock GM , Wilson RK , Delehaunty K , Dooling D , Fronik C , Fulton L , Fulton B , Graves T , Minx P , Sodergren E , Birney E , Margulies EH , Herrero J , Green ED , Haussler D , Siepel A , Goldman N , Pollard KS , Pedersen JS , Lander ES , Kellis M
Ref : Nature , 478 :476 , 2011
Abstract :
PubMedSearch : Lindblad-Toh_2011_Nature_478_476
PubMedID: 21993624
Gene_locus related to this paper: cavpo-1plip , cavpo-2plrp , cavpo-h0v1b7 , cavpo-h0v5v8 , cavpo-h0vj36 , cavpo-lipli , rabit-1hlip , rabit-1plip , rabit-g1t6x7 , rabit-LIPH , myolu-l7n1c2 , myolu-g1pqd9 , cavpo-h0uyz6 , cavpo-h0vi56 , rabit-g1tbj4 , myolu-g1p5c0 , rabit-g1sds3 , rabit-g1sye0 , cavpo-h0v0r2 , cavpo-h0v7s5 , rabit-g1sp43 , myolu-g1p4p3 , cavpo-h0vw09 , rabit-g1ssu3 , myolu-g1pds0 , rabit-g1sic4 , cavpo-h0v2c4 , myolu-g1pg61 , myolu-g1pnb1 , myolu-g1pu06 , myolu-g1qa15 , myolu-g1qfu0 , rabit-g1sn99 , rabit-g1snq9 , rabit-g1sns7 , rabit-g1tuu8 , rabit-g1tzq7 , cavpo-h0v2i2 , cavpo-h0v2j0 , cavpo-h0vsf5 , cavpo-a0a286x8d3 , cavpo-a0a286xbr3 , cavpo-a0a286y0i8 , cavpo-a0a286y4p3 , myolu-g1q2n9 , cavpo-h0v1p4 , myolu-g1pan8 , myolu-g1paq0 , myolu-g1par4 , myolu-g1prn3 , myolu-g1q3i0 , myolu-g1q463 , myolu-g1pat6 , myolu-g1q859 , rabit-g1sul9 , rabit-g1sun0 , rabit-g1sup0 , myolu-l7n125 , myolu-g1pan2 , rabit-g1sxd0 , cavpo-h0v8j4 , rabit-d5fit0 , rabit-g1tkr5 , myolu-g1nty6 , myolu-g1p1p3 , cavpo-h0vdd5 , myolu-g1pdp2 , rabit-g1tmm5 , cavpo-h0vhq3 , myolu-g1nth4 , cavpo-h0vqx6 , rabit-g1tqr7 , myolu-g1p1e9 , cavpo-h0v8y6 , rabit-g1skt3 , myolu-g1nzg3 , cavpo-h0v5z0 , rabit-g1sgz5 , myolu-g1pkg5 , rabit-g1tmw5 , rabit-g1t134 , cavpo-a0a286x9v5 , myolu-g1qc57 , myolu-g1q061 , rabit-g1tnp4 , rabit-g1tyf7 , cavpo-h0w2w1 , rabit-g1ta36 , cavpo-h0w342 , myolu-g1q4e3 , rabit-g1sqa1 , cavpo-h0uxk7 , myolu-g1p353 , cavpo-h0vpm0 , rabit-a0a5f9cru6 , cavpo-a0a286xtc0 , myolu-g1nt22 , rabit-g1smi0 , cavpo-h0vin2 , myolu-g1q6b4 , rabit-g1tsd3 , cavpo-h0vg80 , cavpo-h0uy83 , rabit-g1ta86 , myolu-g1pa25 , cavpo-h0vls0 , cavpo-a0a286xw20 , rabit-g1sya5 , cavpo-a0a286xna1 , myolu-g1p5z6

Title : The genome of the green anole lizard and a comparative analysis with birds and mammals - Alfoldi_2011_Nature_477_587
Author(s) : Alfoldi J , Di Palma F , Grabherr M , Williams C , Kong L , Mauceli E , Russell P , Lowe CB , Glor RE , Jaffe JD , Ray DA , Boissinot S , Shedlock AM , Botka C , Castoe TA , Colbourne JK , Fujita MK , Moreno RG , ten Hallers BF , Haussler D , Heger A , Heiman D , Janes DE , Johnson J , de Jong PJ , Koriabine MY , Lara M , Novick PA , Organ CL , Peach SE , Poe S , Pollock DD , de Queiroz K , Sanger T , Searle S , Smith JD , Smith Z , Swofford R , Turner-Maier J , Wade J , Young S , Zadissa A , Edwards SV , Glenn TC , Schneider CJ , Losos JB , Lander ES , Breen M , Ponting CP , Lindblad-Toh K
Ref : Nature , 477 :587 , 2011
Abstract :
PubMedSearch : Alfoldi_2011_Nature_477_587
PubMedID: 21881562
Gene_locus related to this paper: anoca-h9g670 , anoca-h9g675 , anoca-h9g680 , anoca-h9gbf2 , anoca-h9gl37 , anoca-h9gq07 , anoca-h9gqa2 , anoca-h9gqv4 , anoca-h9gr08 , anoca-h9glr3 , anoca-h9gfq0 , anoca-h9gfy1 , anoca-h9g7n4 , anoca-h9gpa2 , anoca-h9g3p8

Title : Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control - Neafsey_2010_Genome.Res_20_938
Author(s) : Neafsey DE , Barker BM , Sharpton TJ , Stajich JE , Park DJ , Whiston E , Hung CY , McMahan C , White J , Sykes S , Heiman D , Young S , Zeng Q , Abouelleil A , Aftuck L , Bessette D , Brown A , FitzGerald M , Lui A , Macdonald JP , Priest M , Orbach MJ , Galgiani JN , Kirkland TN , Cole GT , Birren BW , Henn MR , Taylor JW , Rounsley SD
Ref : Genome Res , 20 :938 , 2010
Abstract :
PubMedSearch : Neafsey_2010_Genome.Res_20_938
PubMedID: 20516208
Gene_locus related to this paper: cocp7-c5p2u8 , cocp7-c5p5s7 , cocp7-c5pe69 , cocp7-c5pf68 , cocp7-c5pgk6 , cocim-j3ka92 , cocp7-c5phc6 , cocps-e9d3i4 , cocit-a0a0j8rde7 , cocps-e9csw0 , cocps-e9dgm8