Helicobacter pylori (Campylobacter pylori). Uncharacterized protein BioV
This enzyme is the functional equivalent of BioH in many bacteria including E. Coli and Pseudomonas aeruginosa (Bi et al. 2016, Cao et al. 2017) In Francisella BioJ is the enzyme of the biotin biosynthesis pathway that determines the chain length of the biotin valeryl side-chain. It is the functionnal equivalent of BioH although it shows low homology to BioH (belongs to hormone sensitive lipase family)(Feng et al. 2014)..In Haemophilus influenzae it is another family Duf_452 which plays the role (Shi et al. 2016). Other strains: ATCC 700392 \/ 26695\; HPAG1\; X47-2AL\; B8\; R055a\; Hp P-30\; Hp P-16\; P12\; PZ5026\; UMB_G1\; A45\; R036d\; J166\; oki673\; India7\; FD662\; Hp P-74\; NY40\; NQ4110\; NCTC 11637 = CCUG 17874 = ATCC 43504 R046Wa\; OK113\; Hp H-27\; Hp A-26\; G27\; FD703\; Hp H-44\; Hp H-11\; NQ4044\; CPY1124\; UM114\; CPY6271\; FD430\; F57\; Puno120\; Hp A-9\; Puno135\; BM012S\; R038b\; Hp H-28\; v225d\; Aklavik117\; UM067\; Hp H-16\; R32b\; oki112\; Hp A-5\; 35A\; Hp H-45\; FD506\; Hp H-4\; R056a\; CPY6311\; R018c\; UM038\; Hp H-34\; ELS37\; Hp P-23\; NQ4228\; Aklavik86\; 51\; Shi169\; SJM180\; Hp P-62\; UM037\; F32\; FD423\; PZ5086\; R037c\; HP250BFi\; F16\; CPY1962\; CPY1662\; B38\; Lithuania75\; XZ274\; PeCan4\; FD719\; Hp H-5b\; CCHI 33\; Hp A-14\; NQ4216\; OK310\; GAMchJs106B\; GAM270ASi\; UM065\; Hp H-36\; FD577\; Hp H-9\; 52\; Hp H-42\; UM023\; GAM93Bi\; Hp H-10\; 98-10\; Hp H-30\; NQ4200\; PeCan18\; CPY3281\; UM077\; Hp A-17\; GAM114Ai\; Hp A-11\; J99 \/ ATCC 700824\; 908\; FD535\; UM066\; Hp H-41\; 83\; UM111\; Hp P-2\; UM085\; GAM100Ai\; GAM105Ai\; GAM83Bi\; PZ5024\; Hp P-28b\; Hp A-16\; Hp H-18\; GAM118Bi\; Hp H-43\; UM084\; Hp A-27\; PZ5056\; GAMchJs136i\; GAM210Bi\; Hp P-13\; Hp P-13b\; FD568\; SNT49\; NQ4099\; Hp P-3\; Hp H-19\; Hp P-3b\; Hp P-8\; Hp P-8b\; GC26\; Hp H-3\; GAM239Bi\; Hp H-23\; GAM96Ai\; Hp P-4d\; Hp P-4\; Hp P-4c\; Hp H-6\; GAM245Ai\; GAM249T\; GAM117Ai\; PZ5004\; GAM264Ai\; Hp P-11\; Hp P-11b\; NQ4053\; GAM115Ai\; GAM103Bi\; F30\; Gambia94\/24\; HUP-B14\; Hp H-1\; Hp P-15\; Hp P-15b\; GAM246Ai\; GAM121Aii GAM244Ai\; NQ4161\; Hp P-26\; GAM260BSi\; HP260BFii\; GAM265BSii\; CG-IMSS-2012\; Hp P-41\; GAM231Ai\; GAM80Ai\; GAMchJs124i\; GAM101Biv\; GAM201Ai\; GAMchJs117Ai\; GAM119Bi\; NQ4076\; GAM254Ai\; R030b\; Hp M5\; Hp P-25d\; Hp M1\; Hp M4\; Hp P-1\; Hp P-1b\; Hp M9\; Hp M6\; Hp H-24b\; Hp H-24c\; Hp P-25c\; Hp M2\; Hp P-25\; Hp M3\; HP116Bi\; GAM71Ai\; SouthAfrica7\; SouthAfrica20\;GAM263BFi\; GAM42Ai\; GAM120Ai\; PZ5080\; Hp A-6\; Hp H-29\; Hp H-24\;\; HP260Bi\; Hp H-21\; GAMchJs114i\; Hp A-20\; SouthAfrica50\; Hp A-4\; Hp A-8
Family : AlphaBeta_hydrolase
Block : X
Position in NCBI Life Tree : Helicobacter pylori
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms N E > Bacteria N E > Proteobacteria N E > delta\/epsilon subdivisions N E > Epsilonproteobacteria N E > Campylobacterales N E > Helicobacteraceae N E > Helicobacter N E > Helicobacter pylori N EMRFFSGFGFV NESVLFEEWL LKGAYDVSGF SMGAIKAIEY AYNEILQQRR INSLLLFSPC MLAHKSLAFK RLQLSSFQKD PQSYMDNFYQ EVGLSAQLER FKKEGSLEEL EFLLNYKYSD SIIRLLLEKG VKIEVFIGLK DKITDIQALL EFFMPLVQVW QFKDCNHLLQ KS
Title : A Biotin Biosynthesis Gene Restricted to Helicobacter - Bi_2016_Sci.Rep_6_21162 |
Author(s) : Bi H , Zhu L , Jia J , Cronan JE |
Ref : Sci Rep , 6 :21162 , 2016 |
Abstract : |
PubMedSearch : Bi_2016_Sci.Rep_6_21162 |
PubMedID: 26868423 |
Gene_locus related to this paper: 9gamm-BioJ , helpy-o25061 |
Title : A mutation burst during the acute phase of Helicobacter pylori infection in humans and rhesus macaques - Linz_2014_Nat.Commun_5_4165 |
Author(s) : Linz B , Windsor HM , McGraw JJ , Hansen LM , Gajewski JP , Tomsho LP , Hake CM , Solnick JV , Schuster SC , Marshall BJ |
Ref : Nat Commun , 5 :4165 , 2014 |
Abstract : |
PubMedSearch : Linz_2014_Nat.Commun_5_4165 |
PubMedID: 24924186 |
Gene_locus related to this paper: helpy-o25061 |
Title : Draft Genome Sequence of Strain X47-2AL, a Feline Helicobacter pylori Isolate - Veyrier_2013_Genome.Announc_1_e01095 |
Author(s) : Veyrier FJ , Ecobichon C , Boneca IG |
Ref : Genome Announc , 1 : , 2013 |
Abstract : |
PubMedSearch : Veyrier_2013_Genome.Announc_1_e01095 |
PubMedID: 24356847 |
Gene_locus related to this paper: helpy-o25061 |
Title : Genome sequences of 65 Helicobacter pylori strains isolated from asymptomatic individuals and patients with gastric cancer, peptic ulcer disease, or gastritis - Blanchard_2013_Pathog.Dis_68_39 |
Author(s) : Blanchard TG , Czinn SJ , Correa P , Nakazawa T , Keelan M , Morningstar L , Santana-Cruz I , Maroo A , McCracken C , Shefchek K , Daugherty S , Song Y , Fraser CM , Fricke WF |
Ref : Pathog Dis , 68 :39 , 2013 |
Abstract : |
PubMedSearch : Blanchard_2013_Pathog.Dis_68_39 |
PubMedID: 23661595 |
Gene_locus related to this paper: helpy-o25061 |
Title : Draft Genome Sequences of Helicobacter pylori Strains Isolated from Regions of Low and High Gastric Cancer Risk in Colombia - Sheh_2013_Genome.Announc_1_e00736 |
Author(s) : Sheh A , Piazuelo MB , Wilson KT , Correa P , Fox JG |
Ref : Genome Announc , 1 : , 2013 |
Abstract : |
PubMedSearch : Sheh_2013_Genome.Announc_1_e00736 |
PubMedID: 24051318 |
Gene_locus related to this paper: helpy-o25061 |
Title : Helicobacter pylori genomic microevolution during naturally occurring transmission between adults - Linz_2013_PLoS.One_8_e82187 |
Author(s) : Linz B , Windsor HM , Gajewski JP , Hake CM , Drautz DI , Schuster SC , Marshall BJ |
Ref : PLoS ONE , 8 :e82187 , 2013 |
Abstract : |
PubMedSearch : Linz_2013_PLoS.One_8_e82187 |
PubMedID: 24340004 |
Gene_locus related to this paper: helpy-o25061 |
Title : Genome Sequences of Three hpAfrica2 Strains of Helicobacter pylori - Duncan_2013_Genome.Announc_1_e00729 |
Author(s) : Duncan SS , Bertoli MT , Kersulyte D , Valk PL , Tamma S , Segal I , McClain MS , Cover TL , Berg DE |
Ref : Genome Announc , 1 : , 2013 |
Abstract : |
PubMedSearch : Duncan_2013_Genome.Announc_1_e00729 |
PubMedID: 24072860 |
Gene_locus related to this paper: helpy-o25061 |
Title : Genome of Helicobacter pylori strain XZ274, an isolate from a tibetan patient with gastric cancer in China - Guo_2012_J.Bacteriol_194_4146 |
Author(s) : Guo Y , Wang H , Li Y , Song Y , Chen C , Liao Y , Ren L , Guo C , Tong W , Shen W , Chen M , Mao X , Guo G , Zou Q |
Ref : Journal of Bacteriology , 194 :4146 , 2012 |
Abstract : |
PubMedSearch : Guo_2012_J.Bacteriol_194_4146 |
PubMedID: 22815458 |
Gene_locus related to this paper: helpy-o25061 |
Title : Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8 - Farnbacher_2010_BMC.Genomics_11_335 |
Author(s) : Farnbacher M , Jahns T , Willrodt D , Daniel R , Haas R , Goesmann A , Kurtz S , Rieder G |
Ref : BMC Genomics , 11 :335 , 2010 |
Abstract : |
PubMedSearch : Farnbacher_2010_BMC.Genomics_11_335 |
PubMedID: 20507619 |
Gene_locus related to this paper: helpy-o25061 |
Title : The complete genome sequence of a chronic atrophic gastritis Helicobacter pylori strain: evolution during disease progression - Oh_2006_Proc.Natl.Acad.Sci.U.S.A_103_9999 |
Author(s) : Oh JD , Kling-Backhed H , Giannakis M , Xu J , Fulton RS , Fulton LA , Cordum HS , Wang C , Elliott G , Edwards J , Mardis ER , Engstrand LG , Gordon JI |
Ref : Proc Natl Acad Sci U S A , 103 :9999 , 2006 |
Abstract : |
PubMedSearch : Oh_2006_Proc.Natl.Acad.Sci.U.S.A_103_9999 |
PubMedID: 16788065 |
Gene_locus related to this paper: helpy-o25061 |
Title : Genomic sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori. - |
Author(s) : Alm RA , Ling L-SL , Moir DT , King BL , Brown ED , Doig PC , Smith DR , Noonan B , Guild BC , deJonge BL , Carmel G , Tummino PJ , Caruso A , Uria-Nickelsen M , Mills DM , Ives C , Gibson R , Merberg D , Mills SD , Jiang Q , Taylor DE , Vovis GF , Trust TJ |
Ref : Nature , 397 :176 , 1999 |
PubMedID: 9923682 |
Gene_locus related to this paper: helpy-JHP0676 , helpy-o25061 |
Title : The complete genome sequence of the gastric pathogen Helicobacter pylori. - Tomb_1997_Nature_388_539 |
Author(s) : Tomb J-F , White O , Kerlavage AR , Clayton RA , Sutton GG , Fleischmann RD , Ketchum KA , Klenk H-P , Gill S , Dougherty BA , Nelson K , Quackenbush J , Zhou L , Kirkness EF , Peterson S , Loftus B , Richardson D , Dodson R , Khalak HG , Glodek A , McKenney K , FitzGerald LM , Lee N , Adams MD , Hickey EK , Berg DE , Gocayne JD , Utterback TR , Peterson JD , Kelley JM , Cotton MD , Weidman JM , Fujii C , Bowman C , Watthey L , Wallin E , Hayes WS , Borodovsky M , Karp PD , Smith HO , Fraser CM , Venter JC |
Ref : Nature , 388 :539 , 1997 |
Abstract : |
PubMedSearch : Tomb_1997_Nature_388_539 |
PubMedID: 9252185 |
Gene_locus related to this paper: helpy-HP0739 , helpy-o25061 |