Gene_Locus Report

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Gene_locus Report for: drovi-b4m918

Drosophila virilis (Fruit fly) GJ18005

Relationship
Family|Gliotactin
Block| C
Position in NCBI Life Tree|Drosophila virilis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Brachycera: N E > Muscomorpha: N E > Eremoneura: N E > Cyclorrhapha: N E > Schizophora: N E > Acalyptratae: N E > Ephydroidea: N E > Drosophilidae: N E > Drosophilinae: N E > Drosophilini: N E > Drosophila [fruit fly, genus]: N E > Drosophila [fruit fly, subgenus]: N E > virilis group: N E > Drosophila virilis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CH940654
1 UniProt : B4M918
1 UniProt : B4M918
1 Interpro : B4M918
1 Pfam : B4M918
1 PIRSF : B4M918
1 SUPERFAM : B4M918
Sequence
Graphical view for this peptide sequence: drovi-b4m918
Colored MSA for Gliotactin (raw)
MAQKFKYRDKLKCLLAMLMALMLPQSIDAQTRDPRFYSRVGVDYQWPNPG
DPDYRTYTFNDRRYGHYQPNGYGANYPGRNPPGQYPQGMPNEDRFRFDPN
DPNARTQFPGVLAGWREDLQGKQRRDSLTLERDVFVTTNYGQVQGFKVYM
YDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFKPPRLHRG
WQLLQAVDFGPACPQPVRYTGATKGVMDMDEDCLYLNVYSPKTGAGVAQK
YPVMVYIHGGEFVHGASNLFPGHVLASFYDVVVVTLNYRLGALGFLSTGD
ENSPGNYGILDQSMALKWVHDNIEFFNGDRDSITLFGPGAGGASAGLLMV
APQTRNIVKRVIAQSGSALADWALIQDKYRAQNTSRVLGQVLGCSIDSSW
KLVNCLRTGRSFYELGNAEFPPQVGSFPWGPVLDHNFTLPGDDWYEGWRE
KDWRFLTQTPETLIRSGRFNRNIQYMTGVTTQEAAFFVAQNESLAPYYEL
DNRFFEQKVREHVFRYNYTLNPNGVYEAIKYMYTYWPDPNNNTIIRDQYI
NMLSDLYYRAPVDQMVKLLLEQKIPVYMYVLNTTVEALNLPQWRKYPHDT
EHYFLTGAPFMDTEFFPKKEHLQRNMWTDNDRNMSHFFMQTYSNFARYGN
PTPQQVLGMHFQRAYQGEIRYLNINTTYNSSILLNYRQTECAFWTQYLPT
VIGVLVPTYPPTTEYWWEPKEPLQIAFWSMSVACFFLIVLVVICCIMWRN
AKRQSDRFYDEDVFINGEGMEPEPDARGVDNAHMVTNHHALRSRDNIYEY
RDSPSTKTLASKAQTDTTSLRSPSSLAMTQKSGSQASLKSGISLKETNGS
LVKSERAATPRSQTNGTSAKAAPIEEKRLLQPLSSTPVAQLQAEPTKRMA
AAPSVASSSRSTTPVPSARTTTTTATLTAQPAVQPRRTQLVEGVPQTSV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MAQKFKYRDKLKCLLAMLMALMLPQSIDAQTRDPRFYSRVGVDYQWPNPG
DPDYRTYTFNDRRYGHYQPNGYGANYPGRNPPGQYPQGMPNEDRFRFDPN
DPNARTQFPGVLAGWREDLQGKQRRDSLTLERDVFVTTNYGQVQGFKVYM
YDNPDPKSFYRPYHSTVDRVMGECSVFLGIPYALPPTFEGRFKPPRLHRG
WQLLQAVDFGPACPQPVRYTGATKGVMDMDEDCLYLNVYSPKTGAGVAQK
YPVMVYIHGGEFVHGASNLFPGHVLASFYDVVVVTLNYRLGALGFLSTGD
ENSPGNYGILDQSMALKWVHDNIEFFNGDRDSITLFGPGAGGASAGLLMV
APQTRNIVKRVIAQSGSALADWALIQDKYRAQNTSRVLGQVLGCSIDSSW
KLVNCLRTGRSFYELGNAEFPPQVGSFPWGPVLDHNFTLPGDDWYEGWRE
KDWRFLTQTPETLIRSGRFNRNIQYMTGVTTQEAAFFVAQNESLAPYYEL
DNRFFEQKVREHVFRYNYTLNPNGVYEAIKYMYTYWPDPNNNTIIRDQYI
NMLSDLYYRAPVDQMVKLLLEQKIPVYMYVLNTTVEALNLPQWRKYPHDT
EHYFLTGAPFMDTEFFPKKEHLQRNMWTDNDRNMSHFFMQTYSNFARYGN
PTPQQVLGMHFQRAYQGEIRYLNINTTYNSSILLNYRQTECAFWTQYLPT
VIGVLVPTYPPTTEYWWEPKEPLQIAFWSMSVACFFLIVLVVICCIMWRN
AKRQSDRFYDEDVFINGEGMEPEPDARGVDNAHMVTNHHALRSRDNIYEY
RDSPSTKTLASKAQTDTTSLRSPSSLAMTQKSGSQASLKSGISLKETNGS
LVKSERAATPRSQTNGTSAKAAPIEEKRLLQPLSSTPVAQLQAEPTKRMA
AAPSVASSSRSTTPVPSARTTTTTATLTAQPAVQPRRTQLVEGVPQTSV


References
    Title: Assembly reconciliation
    Zimin AV, Smith DR, Sutton G, Yorke JA
    Ref: Bioinformatics, 24:42, 2008 : PubMed

            

    Title: Evolution of genes and genomes on the Drosophila phylogeny
    Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W and MacCallum I <405 more author(s)>
    Ref: Nature, 450:203, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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