Gene_Locus Report

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Gene_locus Report for: leima-q4fw33

Leishmania major strain Friedlin hypothetical protein

Comment
PGAP1 92 503


Relationship
Family|PGAP1
Block| X
Position in NCBI Life Tree|Leishmania major strain Friedlin
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Euglenozoa: N E > Kinetoplastida: N E > Trypanosomatidae: N E > Leishmaniinae: N E > Leishmania [genus]: N E > Leishmania [subgenus]: N E > Leishmania major species complex: N E > Leishmania major: N E > Leishmania major strain Friedlin: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : CP000081, XP_003722832, CBZ13066
1 UniProt : E9AFR2
1 Interpro : E9AFR2
1 Prodom : E9AFR2
1 Pfam : E9AFR2
1 PIRSF : E9AFR2
1 SUPERFAM : E9AFR2
Sequence
Graphical view for this peptide sequence: leima-q4fw33
Colored MSA for PGAP1 (raw)
MDAPRRLTGGRLLKAVYVFFLLLFGLFATGAYNWAFKVYRTQPQNINPVM
YPLFTEINVSAFAPTMREKYYRLWRTYDWMADSYAAPRVDGVYARVPIVY
VHGNGGSYYCARSLARFVYESNARLRQHAMREYRRHVKRQLFQEYRTNQS
LEEPEEGARIPEWLQHRVEEKIVREEVPLLGAELFSVDFLEESSTQSASI
TLKEARFVNHSVHLVMSGFLRTYADVLAAPPAPAFDSDTLDKNDTRRTSG
TATLSAATMKLLKEVEREYWQSVCSHSSIAADEKMCRQAKHLTKRFSTLE
RVRAEVQRVQQQGIWIWAESLGGVTTLLAAILAPHLYAGVVMVGTPMHYP
PLFFDHASVWIYEILNAAVLRRYPAPEDVQRVRDSTINWADMVADRKRPN
DLLRDLRAVPPAELNHRLRNLTLLGINGGTLDDVIPSISGYLQRSQPRAP
GTLVNRSSLLQDGGYRRDISTETLRGCGTAMDHRGLVYGLQFLQHSADSL
VRAALLPNANAY
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MDAPRRLTGGRLLKAVYVFFLLLFGLFATGAYNWAFKVYRTQPQNINPVM
YPLFTEINVSAFAPTMREKYYRLWRTYDWMADSYAAPRVDGVYARVPIVY
VHGNGGSYYCARSLARFVYESNARLRQHAMREYRRHVKRQLFQEYRTNQS
LEEPEEGARIPEWLQHRVEEKIVREEVPLLGAELFSVDFLEESSTQSASI
TLKEARFVNHSVHLVMSGFLRTYADVLAAPPAPAFDSDTLDKNDTRRTSG
TATLSAATMKLLKEVEREYWQSVCSHSSIAADEKMCRQAKHLTKRFSTLE
RVRAEVQRVQQQGIWIWAESLGGVTTLLAAILAPHLYAGVVMVGTPMHYP
PLFFDHASVWIYEILNAAVLRRYPAPEDVQRVRDSTINWADMVADRKRPN
DLLRDLRAVPPAELNHRLRNLTLLGINGGTLDDVIPSISGYLQRSQPRAP
GTLVNRSSLLQDGGYRRDISTETLRGCGTAMDHRGLVYGLQFLQHSADSL
VRAALLPNANAY


Reference
    Title: The genome of the kinetoplastid parasite, Leishmania major
    Ivens AC, Peacock CS, Worthey EA, Murphy L, Aggarwal G, Berriman M, Sisk E, Rajandream MA, Adlem E and Myler PJ <91 more author(s)>
    Ref: Science, 309:436, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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