takru-2bneur

 
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes) Neuroligin 2b

Comment
SINFRUP00000006149 SINFRUG00000006149 SINFRUP00000006150 SINFRUG00000074777 SINFRUP00000076572 SINFRUP00000006150 SINFRUG00000006150


Relationship
Family Neuroligin
Block C
Takifugu rubripes position in NCBI Life Tree :
N link to NCBI taxonomic web page and E link to ESTHER gene locus found in this strain.
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Actinopterygii: N E > Actinopteri: N E > Neopterygii: N E > Teleostei: N E > Osteoglossocephalai: N E > Clupeocephala: N E > Euteleosteomorpha: N E > Neoteleostei: N E > Eurypterygia: N E > Ctenosquamata: N E > Acanthomorphata: N E > Euacanthomorphacea: N E > Percomorphaceae: N E > Eupercaria: N E > Tetraodontiformes: N E > Tetraodontoidei: N E > Tetradontoidea: N E > Tetraodontidae: N E > Takifugu: N E > Takifugu rubripes: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic



1 Genbank : GQ489199
2 UniProt : D2X2G8, H2RY53
>3 UniProtTrembl links 5 more: D2X2G8, H2RY53, A0A674MTM7
>3 Interpro links 5 more: D2X2G8, H2RY53, A0A674MTM7
>3 Prodom links 5 more: D2X2G8, H2RY53, A0A674MTM7
>3 Pfam links 5 more: D2X2G8, H2RY53, A0A674MTM7
>3 PIRSF links 5 more: D2X2G8, H2RY53, A0A674MTM7
>3 SUPERFAM links 5 more: D2X2G8, H2RY53, A0A674MTM7
>3 QuickSwissBlast links 5 more: D2X2G8, H2RY53, A0A674MTM7
 
Sequence
Graphical view for this peptide sequence: takru-2bneur
Colored MSA for Neuroligin (raw)
MNLIRPPLSKPSQRGFLLSRTHTLNLMTDWCLMGVVGLVLVFSLASSQKL
DPSKHPIVTTNYGKLRGVKKDLNNEILGPVEQYLGVPYATAPIGDRRFQP
PEAPGSWQEIRNATQFAHVCPQNIHGVLPEIMLPVWFTDNLDVAAGYIQN
QSEDCLYLNVYVPTEDGPLTKKHDESSMNKPRDEDIRDRRKKPVMLFIHG
GSYMEGTGNMFDASVLAAYGNVIVVTMNYRLGVLGFLSTGDQSAKGNYGL
LDQIQALRWLNENIGHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFH
RAIAQSGTAISSWSVNYQPLKYTKILARKVGCTYTETADLVDCLRRKNFR
ELVDQDIQPARYHIAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQG
EGLKFVDDSEDNDGISAAAFDYTISNFVDNLYGYPEGKDILRETIKFMYT
DWADRDNGDMRRKTLLALFTDHQWVAPAVATAKLHAEFQSPVYFYTFYHH
CQTETRPEWADAAHGDEIPYVFGVPMIGATDLFPCNFSKNDVMLSAVVMT
YWTNFAKTGDPNLPVPQDTKFIHTKPNRFEEVIWTKFNSKDKQYLHIGLK
PRVRDNYRANKVAFWLELVPHLHSLHEELFPTTTRSPVGPGPGTHRPWSR
TPGPRTTRHPYPTFPSDPEPEGSERPHQNLFPGDTRDYSTELSVTVAVGA
SLLFLNILAFAALYYKRDKRHEMRRHRLSPQRGGPANDLAHSQEEEIMSL
QMKHSEHDAHHDLEPLRPHDILRPACPPDYTLALRRAPDDVPLMTPNTIT
MIPSTITSMQPLHAFNTFPSTGHNNTLPHPHSTTRV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MNLIRPPLSKPSQRGFLLSRTHTLNLMTDWCLMGVVGLVLVFSLASSQKL
DPSKHPIVTTNYGKLRGVKKDLNNEILGPVEQYLGVPYATAPIGDRRFQP
PEAPGSWQEIRNATQFAHVCPQNIHGVLPEIMLPVWFTDNLDVAAGYIQN
QSEDCLYLNVYVPTEDGPLTKKHDESSMNKPRDEDIRDRRKKPVMLFIHG
GSYMEGTGNMFDASVLAAYGNVIVVTMNYRLGVLGFLSTGDQSAKGNYGL
LDQIQALRWLNENIGHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFH
RAIAQSGTAISSWSVNYQPLKYTKILARKVGCTYTETADLVDCLRRKNFR
ELVDQDIQPARYHIAFGPVVDGDVVPDDPEILMQQGEFLNYDILIGVNQG
EGLKFVDDSEDNDGISAAAFDYTISNFVDNLYGYPEGKDILRETIKFMYT
DWADRDNGDMRRKTLLALFTDHQWVAPAVATAKLHAEFQSPVYFYTFYHH
CQTETRPEWADAAHGDEIPYVFGVPMIGATDLFPCNFSKNDVMLSAVVMT
YWTNFAKTGDPNLPVPQDTKFIHTKPNRFEEVIWTKFNSKDKQYLHIGLK
PRVRDNYRANKVAFWLELVPHLHSLHEELFPTTTRSPVGPGPGTHRPWSR
TPGPRTTRHPYPTFPSDPEPEGSERPHQNLFPGDTRDYSTELSVTVAVGA
SLLFLNILAFAALYYKRDKRHEMRRHRLSPQRGGPANDLAHSQEEEIMSL
QMKHSEHDAHHDLEPLRPHDILRPACPPDYTLALRRAPDDVPLMTPNTIT
MIPSTITSMQPLHAFNTFPSTGHNNTLPHPHSTTRV

no DNA




References
    Title: Characterization of the neuroligin gene family expression and evolution in zebrafish
    Rissone A, Sangiorgio L, Monopoli M, Beltrame M, Zucchi I, Bussolino F, Arese M, Cotelli F
    Ref: Developmental Dynamics, 239:688, 2010 : PubMed

            

    Title: The medaka draft genome and insights into vertebrate genome evolution
    Kasahara M, Naruse K, Sasaki S, Nakatani Y, Qu W, Ahsan B, Yamada T, Nagayasu Y, Doi K and Kohara Y <28 more author(s)>
    Ref: Nature, 447:714, 2007 : PubMed

            

    Title: Whole-genome shotgun assembly and analysis of the genome of Fugu rubripes
    Aparicio S, Chapman J, Stupka E, Putnam N, Chia JM, Dehal P, Christoffels A, Rash S, Hoon S and Brenner S <31 more author(s)>
    Ref: Science, 297:1301, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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