Gene_Locus Report

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Gene_locus Report for: trede-TDE0521

Treponema denticola carboxylesterase family protein

Comment
Other strains: Treponema denticola (and strain F0402; H-22; OTK; SP44; H1-T; MYR-T; AL-2; ATCC 33521; US-Trep; ASLM; SP23; SP37; ATCC 35404; ATCC 33520) does not seem to have SEDCLYLN


Relationship
Family|Carb_B_Bacteria
Block| C
Position in NCBI Life Tree|Treponema denticola
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Spirochaetes: N E > Spirochaetia: N E > Spirochaetales: N E > Spirochaetaceae: N E > Treponema: N E > Treponema denticola: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: trede-TDE0521
Colored MSA for Carb_B_Bacteria (raw)
MKIIQTEIGKAYANVVGKTKEGTPVYSILSVPYARAERFEYAKILDKQDY
SPDMIINRKETVCFPQRKYPLFFNIFMKHHMLRPEFQPLKDTQTENAFVV
NIWAPENFTERKPVVVFLHGGGEGSGTVPIYTMEHIAEQGVVAVTITYRI
GNFGYMPVFDKGEIKASLAYLDQQTALNWIYNTISSFGGDNTNITLMGHC
GGAVAALYHYLNPVSNKLFHKLILCAGNVPILSEFDFAKNEYAKMLSKNH
LKGLEELKKLSAKKLMKLKGGQNDIVDGIFFAEHPMKLLERGEFPCMPVL
IGSNKDEFSMIELPMFYKALGITKKKKNLKDVLLKKYGEFAETLESEFKS
EANGIVDLQIQIMELLIFHSSALFLMETLSKKCPVYGYRMNYIPHLYNGL
RGSYHGAELAFFFGTIDKMNIPITDENRKAVISIQKDWIEFIRTGKMKDR
TLFNETGKITEYDKDIRTIPFPHAHLIHHIQNSGIADKLRKEYIHNRR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKIIQTEIGKAYANVVGKTKEGTPVYSILSVPYARAERFEYAKILDKQDY
SPDMIINRKETVCFPQRKYPLFFNIFMKHHMLRPEFQPLKDTQTENAFVV
NIWAPENFTERKPVVVFLHGGGEGSGTVPIYTMEHIAEQGVVAVTITYRI
GNFGYMPVFDKGEIKASLAYLDQQTALNWIYNTISSFGGDNTNITLMGHC
GGAVAALYHYLNPVSNKLFHKLILCAGNVPILSEFDFAKNEYAKMLSKNH
LKGLEELKKLSAKKLMKLKGGQNDIVDGIFFAEHPMKLLERGEFPCMPVL
IGSNKDEFSMIELPMFYKALGITKKKKNLKDVLLKKYGEFAETLESEFKS
EANGIVDLQIQIMELLIFHSSALFLMETLSKKCPVYGYRMNYIPHLYNGL
RGSYHGAELAFFFGTIDKMNIPITDENRKAVISIQKDWIEFIRTGKMKDR
TLFNETGKITEYDKDIRTIPFPHAHLIHHIQNSGIADKLRKEYIHNRR


Reference
    Title: Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes
    Seshadri R, Myers GS, Tettelin H, Eisen JA, Heidelberg JF, Dodson RJ, Davidsen TM, DeBoy RT, Fouts DE and Paulsen IT <29 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 101:5646, 2004 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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