| Title : AbGRI4, a novel antibiotic resistance island in multiply antibiotic-resistant Acinetobacter baumannii clinical isolates - Chan_2020_J.Antimicrob.Chemother_75_2760 |
| Author(s) : Chan AP , Choi Y , Clarke TH , Brinkac LM , White RC , Jacobs MR , Bonomo RA , Adams MD , Fouts DE |
| Ref : J Antimicrob Chemother , 75 :2760 , 2020 |
| Abstract : |
| PubMedSearch : Chan_2020_J.Antimicrob.Chemother_75_2760 |
| PubMedID: 32681170 |
| Title : Genome Sequences of the Listeria ivanovii subsp. ivanovii Type Strain and Two Listeria ivanovii subsp. londoniensis Strains - Hupfeld_2015_Genome.Announc_3_e01440 |
| Author(s) : Hupfeld M , Fouts DE , Loessner MJ , Klumpp J |
| Ref : Genome Announc , 3 : , 2015 |
| Abstract : |
| PubMedSearch : Hupfeld_2015_Genome.Announc_3_e01440 |
| PubMedID: 25614561 |
| Gene_locus related to this paper: lismo-LMO2452 , lisip-g2zf96 , lisiv-a0a097bbs7 |
| Title : Genome Sequences of Three Frequently Used Listeria monocytogenes and Listeria ivanovii Strains - Klumpp_2014_Genome.Announc_2_e00404 |
| Author(s) : Klumpp J , Staubli T , Schmitter S , Hupfeld M , Fouts DE , Loessner MJ |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : |
| PubMedSearch : Klumpp_2014_Genome.Announc_2_e00404 |
| PubMedID: 24786957 |
| Gene_locus related to this paper: lisiv-e3zgw7 |
| Title : Whole genome analysis of Leptospira licerasiae provides insight into leptospiral evolution and pathogenicity - Ricaldi_2012_PLoS.Negl.Trop.Dis_6_e1853 |
| Author(s) : Ricaldi JN , Fouts DE , Selengut JD , Harkins DM , Patra KP , Moreno A , Lehmann JS , Purushe J , Sanka R , Torres M , Webster NJ , Vinetz JM , Matthias MA |
| Ref : PLoS Negl Trop Dis , 6 :e1853 , 2012 |
| Abstract : |
| PubMedSearch : Ricaldi_2012_PLoS.Negl.Trop.Dis_6_e1853 |
| PubMedID: 23145189 |
| Gene_locus related to this paper: 9lept-i0xnk5 , 9lept-i0xm07 , 9lept-v6g5z6 , 9lept-i0xpz4 , 9lept-i0xli4 |
| Title : Comparative genomic analysis of Vibrio parahaemolyticus: serotype conversion and virulence - Chen_2011_BMC.Genomics_12_294 |
| Author(s) : Chen Y , Stine OC , Badger JH , Gil AI , Nair GB , Nishibuchi M , Fouts DE |
| Ref : BMC Genomics , 12 :294 , 2011 |
| Abstract : |
| PubMedSearch : Chen_2011_BMC.Genomics_12_294 |
| PubMedID: 21645368 |
| Gene_locus related to this paper: vibpa-PHAC , vibpa-VP0148 , vibpa-VP0409 , vibpa-VP0429 , vibpa-VP0693 , vibpa-VP0837 , vibpa-VP0869 , vibpa-VP1025 , vibpa-VP1181 , vibpa-VP1678 , vibpa-VP2790 , vibpa-VP2974 , vibpa-VPA0054 , vibpa-VPA0070 , vibpa-VPA0468 , vibpa-VPA1061 , vibpa-VPA1249 , vibpa-VPA1467 , vibpa-VPA1496 , vibpa-VPA1595 , vibpa-y674 , vibpa-y969 |
| Title : Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937 - Glasner_2011_J.Bacteriol_193_2076 |
| Author(s) : Glasner JD , Yang CH , Reverchon S , Hugouvieux-Cotte-Pattat N , Condemine G , Bohin JP , Van Gijsegem F , Yang S , Franza T , Expert D , Plunkett G, 3rd , San Francisco MJ , Charkowski AO , Py B , Bell K , Rauscher L , Rodriguez-Palenzuela P , Toussaint A , Holeva MC , He SY , Douet V , Boccara M , Blanco C , Toth I , Anderson BD , Biehl BS , Mau B , Flynn SM , Barras F , Lindeberg M , Birch PR , Tsuyumu S , Shi X , Hibbing M , Yap MN , Carpentier M , Dassa E , Umehara M , Kim JF , Rusch M , Soni P , Mayhew GF , Fouts DE , Gill SR , Blattner FR , Keen NT , Perna NT |
| Ref : Journal of Bacteriology , 193 :2076 , 2011 |
| Abstract : |
| PubMedSearch : Glasner_2011_J.Bacteriol_193_2076 |
| PubMedID: 21217001 |
| Gene_locus related to this paper: dicd3-e0scu7 , dicd3-e0sjp0 , erwch-INDC , dicd3-e0sgk0 , dicze-c6cmc7 , 9entr-u6zcq0 , dicd3-e0sg49 |
| Title : Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche - Purushe_2010_Microb.Ecol_60_721 |
| Author(s) : Purushe J , Fouts DE , Morrison M , White BA , Mackie RI , Coutinho PM , Henrissat B , Nelson KE |
| Ref : Microb Ecol , 60 :721 , 2010 |
| Abstract : |
| PubMedSearch : Purushe_2010_Microb.Ecol_60_721 |
| PubMedID: 20585943 |
| Gene_locus related to this paper: prebr-d8dt96 , prebr-d8du06 , prebr-d8dv28 , prebr-d8dwg8 , prebr-d8dy06 , prer2-d5esm6 , prebr-d8dul5 , prebr-d8dxa2 , prebr-d8dw03 , prer2-d5erq4 , prer2-d5ewz1 , prebr-d8dv01 , prer2-axea1 , prer2-axfa |
| Title : Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice - Fouts_2008_PLoS.Genet_4_e1000141 |
| Author(s) : Fouts DE , Tyler HL , DeBoy RT , Daugherty S , Ren Q , Badger JH , Durkin AS , Huot H , Shrivastava S , Kothari S , Dodson RJ , Mohamoud Y , Khouri H , Roesch LF , Krogfelt KA , Struve C , Triplett EW , Methe BA |
| Ref : PLoS Genet , 4 :e1000141 , 2008 |
| Abstract : |
| PubMedSearch : Fouts_2008_PLoS.Genet_4_e1000141 |
| PubMedID: 18654632 |
| Gene_locus related to this paper: klep3-b5xp56 , klep3-b5xqp6 , klep3-b5xzn5 , klep3-b5xzy8 , klep3-bioh , klep3-menh , klep7-a6t8q2 , klep7-a6t9v6 , klep7-a6tb98 , klep7-mhpc , klep7-y243 , klep7-y1077 , klepn-c4x8q1 , klepn-w8uta0 , klep3-rutd |
| Title : Insights into plant cell wall degradation from the genome sequence of the soil bacterium Cellvibrio japonicus - DeBoy_2008_J.Bacteriol_190_5455 |
| Author(s) : DeBoy RT , Mongodin EF , Fouts DE , Tailford LE , Khouri H , Emerson JB , Mohamoud Y , Watkins K , Henrissat B , Gilbert HJ , Nelson KE |
| Ref : Journal of Bacteriology , 190 :5455 , 2008 |
| Abstract : |
| PubMedSearch : DeBoy_2008_J.Bacteriol_190_5455 |
| PubMedID: 18556790 |
| Gene_locus related to this paper: celju-b3pei5 , celju-b3pf25 , celju-b3pfb5 , celju-b3pgh5 , celju-b3pgz5 , celju-b3ph03 , celju-b3pi00 , celju-b3pi89 , celju-b3pj26 , celju-b3pju5 , celju-b3pks4 , celju-b3pks5 , celju-b3plp7 , celju-metx , celju-b3phr4 , celju-b3pjj6 , celju-b3pcj5 , celju-b3pcu6 , celju-b3pei0 |
| Title : Complete sequence analysis of novel plasmids from emetic and periodontal Bacillus cereus isolates reveals a common evolutionary history among the B. cereus-group plasmids, including Bacillus anthracis pXO1 - Rasko_2007_J.Bacteriol_189_52 |
| Author(s) : Rasko DA , Rosovitz MJ , Okstad OA , Fouts DE , Jiang L , Cer RZ , Kolsto AB , Gill SR , Ravel J |
| Ref : Journal of Bacteriology , 189 :52 , 2007 |
| Abstract : |
| PubMedSearch : Rasko_2007_J.Bacteriol_189_52 |
| PubMedID: 17041058 |
| Gene_locus related to this paper: bacce-c2zyv1 , bacce-q20cj0 , bacce-q20cj2 , bacti-q3elq7 |
| Title : Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species - Fouts_2005_PLoS.Biol_3_e15 |
| Author(s) : Fouts DE , Mongodin EF , Mandrell RE , Miller WG , Rasko DA , Ravel J , Brinkac LM , DeBoy RT , Parker CT , Daugherty SC , Dodson RJ , Durkin AS , Madupu R , Sullivan SA , Shetty JU , Ayodeji MA , Shvartsbeyn A , Schatz MC , Badger JH , Fraser CM , Nelson KE |
| Ref : PLoS Biol , 3 :e15 , 2005 |
| Abstract : |
| PubMedSearch : Fouts_2005_PLoS.Biol_3_e15 |
| PubMedID: 15660156 |
| Gene_locus related to this paper: camje-CJ0796C , camjr-q5ht69 , camjr-q5ht95 , camjr-q5huc7 , camjr-q5hwg6 , camju-a3yll6 |
| Title : Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes - Seshadri_2005_Science_307_105 |
| Author(s) : Seshadri R , Adrian L , Fouts DE , Eisen JA , Phillippy AM , Methe BA , Ward NL , Nelson WC , DeBoy RT , Khouri HM , Kolonay JF , Dodson RJ , Daugherty SC , Brinkac LM , Sullivan SA , Madupu R , Nelson KE , Kang KH , Impraim M , Tran K , Robinson JM , Forberger HA , Fraser CM , Zinder SH , Heidelberg JF |
| Ref : Science , 307 :105 , 2005 |
| Abstract : |
| PubMedSearch : Seshadri_2005_Science_307_105 |
| PubMedID: 15637277 |
| Gene_locus related to this paper: dehm1-q3z6q3 , dehm1-q3z6x9 , dehm1-q3z6z2 , dehm1-q3z8f3 , dehm1-q3za50 |
| Title : Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes - Seshadri_2004_Proc.Natl.Acad.Sci.U.S.A_101_5646 |
| Author(s) : Seshadri R , Myers GS , Tettelin H , Eisen JA , Heidelberg JF , Dodson RJ , Davidsen TM , DeBoy RT , Fouts DE , Haft DH , Selengut J , Ren Q , Brinkac LM , Madupu R , Kolonay J , Durkin SA , Daugherty SC , Shetty J , Shvartsbeyn A , Gebregeorgis E , Geer K , Tsegaye G , Malek J , Ayodeji B , Shatsman S , McLeod MP , Smajs D , Howell JK , Pal S , Amin A , Vashisth P , McNeill TZ , Xiang Q , Sodergren E , Baca E , Weinstock GM , Norris SJ , Fraser CM , Paulsen IT |
| Ref : Proc Natl Acad Sci U S A , 101 :5646 , 2004 |
| Abstract : |
| PubMedSearch : Seshadri_2004_Proc.Natl.Acad.Sci.U.S.A_101_5646 |
| PubMedID: 15064399 |
| Gene_locus related to this paper: trede-q73j01 , trede-q73kf5 , trede-q73kp3 , trede-q73ks1 , trede-q73nf8 , trede-q73qt5 , trede-q73qv0 , trede-q73ra4 , trede-q73ri8 , trede-Q93EK3 , trede-TDE0521 |
| Title : Complete genome sequence of the oral pathogenic Bacterium porphyromonas gingivalis strain W83 - Nelson_2003_J.Bacteriol_185_5591 |
| Author(s) : Nelson KE , Fleischmann RD , DeBoy RT , Paulsen IT , Fouts DE , Eisen JA , Daugherty SC , Dodson RJ , Durkin AS , Gwinn M , Haft DH , Kolonay JF , Nelson WC , Mason T , Tallon L , Gray J , Granger D , Tettelin H , Dong H , Galvin JL , Duncan MJ , Dewhirst FE , Fraser CM |
| Ref : Journal of Bacteriology , 185 :5591 , 2003 |
| Abstract : |
| PubMedSearch : Nelson_2003_J.Bacteriol_185_5591 |
| PubMedID: 12949112 |
| Gene_locus related to this paper: 9gamm-q4a538 , porgi-DPP , porgi-q7mtk3 , porgi-q7mu18 , porgi-q7mub3 , porgi-q7muw6 , porgi-q7mvp4 , porgi-q7mwa7 , porgi-q7mx03 |
| Title : Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis - Paulsen_2003_Science_299_2071 |
| Author(s) : Paulsen IT , Banerjei L , Myers GS , Nelson KE , Seshadri R , Read TD , Fouts DE , Eisen JA , Gill SR , Heidelberg JF , Tettelin H , Dodson RJ , Umayam L , Brinkac L , Beanan M , Daugherty S , DeBoy RT , Durkin S , Kolonay J , Madupu R , Nelson W , Vamathevan J , Tran B , Upton J , Hansen T , Shetty J , Khouri H , Utterback T , Radune D , Ketchum KA , Dougherty BA , Fraser CM |
| Ref : Science , 299 :2071 , 2003 |
| Abstract : |
| PubMedSearch : Paulsen_2003_Science_299_2071 |
| PubMedID: 12663927 |
| Gene_locus related to this paper: entfa-EF0101 , entfa-EF0274 , entfa-EF0381 , entfa-EF0449 , entfa-EF0667 , entfa-EF0786 , entfa-EF1028 , entfa-EF1236 , entfa-EF1505 , entfa-EF1536 , entfa-EF1670 , entfa-EF2618 , entfa-EF2728 , entfa-EF2792 , entfa-EF2963 , entfa-EF3191 |