Gene_Locus Report

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Gene_locus Report for: xanax-XAC3371

Xanthomonas axonopodis, Xanthomonas fuscans, Xanthomonas citri, Xanthomonas hortorum, proline imino-peptidase

Comment
Other strains: Xanthomonas axonopodis (pv. citri; subsp. citri Aw12879) Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122, Xanthomonas citri pv. mangiferaeindicae LMG 941, Xanthomonas hortorum pv. carotae str. M081


Relationship
Family|Proline_iminopeptidase
Block| X
Position in NCBI Life Tree|Xanthomonas axonopodis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Xanthomonadales: N E > Xanthomonadaceae: N E > Xanthomonas: N E > Xanthomonas axonopodis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 2 more: AE011983, ACPX01000186, CAHO01000022
2 UniProt : H8FFP6, V7ZH87
3 UniProt : Q8PH88, H8FFP6, V7ZH87
3 Interpro : Q8PH88, H8FFP6, V7ZH87
3 Pfam : Q8PH88, H8FFP6, V7ZH87
3 PIRSF : Q8PH88, H8FFP6, V7ZH87
3 SUPERFAM : Q8PH88, H8FFP6, V7ZH87
Sequence
Graphical view for this peptide sequence: xanax-XAC3371
Colored MSA for Proline_iminopeptidase (raw)
MNDACRVPGSAVHEAGLVQIGGIQQWVTIEGQDCRNPVVLIVHGGPGNPN
TPFAHRLFGSWTRDFTIVQWDQRGSGKTYAASKPADGERLTMRRLTLDGS
EVARYASQRLGKPKLILMGGSWGSALSVTIAKANPNLFHAYVGTAQLVNY
QDDMASSYAKTLSLARAASDADALGKLEKIGPPPWTNPRNFGVLRRLTRK
YEALSTDPAPEDWFTFAAEYDTPDYRAAYEAGEDYSFLQFVGLAGDGMGP
QIDLRTLGPQFAMPVYLIQGEQDLVTPAQISKAYFDGLSARSKEFLLLPR
TGHDPNPPMMAAQLKVLTRIRAAALANDAH
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MNDACRVPGSAVHEAGLVQIGGIQQWVTIEGQDCRNPVVLIVHGGPGNPN
TPFAHRLFGSWTRDFTIVQWDQRGSGKTYAASKPADGERLTMRRLTLDGS
EVARYASQRLGKPKLILMGGSWGSALSVTIAKANPNLFHAYVGTAQLVNY
QDDMASSYAKTLSLARAASDADALGKLEKIGPPPWTNPRNFGVLRRLTRK
YEALSTDPAPEDWFTFAAEYDTPDYRAAYEAGEDYSFLQFVGLAGDGMGP
QIDLRTLGPQFAMPVYLIQGEQDLVTPAQISKAYFDGLSARSKEFLLLPR
TGHDPNPPMMAAQLKVLTRIRAAALANDAH


References
2 more
    Title: Genome sequence of Xanthomonas citri pv. mangiferaeindicae strain LMG 941
    Midha S, Ranjan M, Sharma V, Pinnaka AK, Patil PB
    Ref: Journal of Bacteriology, 194:3031, 2012 : PubMed

            

    Title: Novel insights into the genomic basis of citrus canker based on the genome sequences of two strains of Xanthomonas fuscans subsp. aurantifolii
    Moreira LM, Almeida NF, Jr., Potnis N, Digiampietri LA, Adi SS, Bortolossi JC, da Silva AC, da Silva AM, de Moraes FE and Setubal JC <21 more author(s)>
    Ref: BMC Genomics, 11:238, 2010 : PubMed

            

    Title: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
    da Silva ACR, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida Jr NF and Kitajima JP <55 more author(s)>
    Ref: Nature, 417:459, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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