| Title : Degradation of ester linkages in rice straw components by Sphingobium species recovered from the sea bottom using a non-secretory tannase-family alpha\/beta hydrolase - Ohta_2021_Environ.Microbiol__ |
| Author(s) : Ohta Y , Katsumata M , Kurosawa K , Takaki Y , Nishimura H , Watanabe T , Kasuya KI |
| Ref : Environ Microbiol , : , 2021 |
| Abstract : |
| PubMedSearch : Ohta_2021_Environ.Microbiol__ |
| PubMedID: 33939871 |
| Gene_locus related to this paper: sphxe-a0a401IYY6 |
| Title : Complete genome sequence and expression profile of the commercial lytic enzyme producer Lysobacter enzymogenes M497-1 - Takami_2017_DNA.Res_24_169 |
| Author(s) : Takami H , Toyoda A , Uchiyama I , Itoh T , Takaki Y , Arai W , Nishi S , Kawai M , Shin-Ya K , Ikeda H |
| Ref : DNA Research , 24 :169 , 2017 |
| Abstract : |
| PubMedSearch : Takami_2017_DNA.Res_24_169 |
| PubMedID: 28065880 |
| Gene_locus related to this paper: lysen-a0a1j1ebl3 , lysen-a0a1j1e5b0 , lysen-a0a0s2dfs0 |
| Title : High frequency of phylogenetically diverse reductive dehalogenase-homologous genes in deep subseafloor sedimentary metagenomes - Kawai_2014_Front.Microbiol_5_80 |
| Author(s) : Kawai M , Futagami T , Toyoda A , Takaki Y , Nishi S , Hori S , Arai W , Tsubouchi T , Morono Y , Uchiyama I , Ito T , Fujiyama A , Inagaki F , Takami H |
| Ref : Front Microbiol , 5 :80 , 2014 |
| Abstract : |
| PubMedSearch : Kawai_2014_Front.Microbiol_5_80 |
| PubMedID: 24624126 |
| Gene_locus related to this paper: 9zzzz-x0wci8 , 9zzzz-x1k9j7 , 9zzzz-x0se68 , 9zzzz-x0tpm6 , 9zzzz-x0tv89 , 9zzzz-x0ws69 , 9zzzz-x1tg33 , 9zzzz-x1anx0 , 9zzzz-x1m8t8 , 9zzzz-x1a5i7 , 9zzzz-x1k2t2 , 9zzzz-x0uzq5 |
| Title : Allying with armored snails: the complete genome of gammaproteobacterial endosymbiont - Nakagawa_2014_ISME.J_8_40 |
| Author(s) : Nakagawa S , Shimamura S , Takaki Y , Suzuki Y , Murakami S , Watanabe T , Fujiyoshi S , Mino S , Sawabe T , Maeda T , Makita H , Nemoto S , Nishimura S , Watanabe H , Watsuji TO , Takai K |
| Ref : Isme J , 8 :40 , 2014 |
| Abstract : |
| PubMedSearch : Nakagawa_2014_ISME.J_8_40 |
| PubMedID: 23924784 |
| Gene_locus related to this paper: 9gamm-s6bga5 |
| Title : Draft Genome Sequence of the Dimorphic Prosthecate Bacterium Brevundimonas abyssalis TAR-001T - Tsubouchi_2013_Genome.Announc_1_e00826 |
| Author(s) : Tsubouchi T , Nishi S , Usui K , Shimane Y , Takaki Y , Maruyama T , Hatada Y |
| Ref : Genome Announc , 1 :e00826 , 2013 |
| Abstract : |
| PubMedSearch : Tsubouchi_2013_Genome.Announc_1_e00826 |
| PubMedID: 24136847 |
| Gene_locus related to this paper: 9caul-u2zck3 , 9caul-u2zbn9 , 9caul-u3ap46 , 9caul-u3auy7 |
| Title : A deeply branching thermophilic bacterium with an ancient acetyl-CoA pathway dominates a subsurface ecosystem - Takami_2012_PLoS.One_7_e30559 |
| Author(s) : Takami H , Noguchi H , Takaki Y , Uchiyama I , Toyoda A , Nishi S , Chee GJ , Arai W , Nunoura T , Itoh T , Hattori M , Takai K |
| Ref : PLoS ONE , 7 :e30559 , 2012 |
| Abstract : |
| PubMedSearch : Takami_2012_PLoS.One_7_e30559 |
| PubMedID: 22303444 |
| Gene_locus related to this paper: 9bact-h5srl9 , 9chlr-h5sfm8 |
| Title : Genome sequence of a mesophilic hydrogenotrophic methanogen Methanocella paludicola, the first cultivated representative of the order Methanocellales - Sakai_2011_PLoS.One_6_e22898 |
| Author(s) : Sakai S , Takaki Y , Shimamura S , Sekine M , Tajima T , Kosugi H , Ichikawa N , Tasumi E , Hiraki AT , Shimizu A , Kato Y , Nishiko R , Mori K , Fujita N , Imachi H , Takai K |
| Ref : PLoS ONE , 6 :e22898 , 2011 |
| Abstract : |
| PubMedSearch : Sakai_2011_PLoS.One_6_e22898 |
| PubMedID: 21829548 |
| Title : Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group - Nunoura_2011_Nucleic.Acids.Res_39_3204 |
| Author(s) : Nunoura T , Takaki Y , Kakuta J , Nishi S , Sugahara J , Kazama H , Chee GJ , Hattori M , Kanai A , Atomi H , Takai K , Takami H |
| Ref : Nucleic Acids Research , 39 :3204 , 2011 |
| Abstract : |
| PubMedSearch : Nunoura_2011_Nucleic.Acids.Res_39_3204 |
| PubMedID: 21169198 |
| Gene_locus related to this paper: 9arch-e6n6u9 |
| Title : Bacterial lifestyle in a deep-sea hydrothermal vent chimney revealed by the genome sequence of the thermophilic bacterium Deferribacter desulfuricans SSM1 - Takaki_2010_DNA.Res_17_123 |
| Author(s) : Takaki Y , Shimamura S , Nakagawa S , Fukuhara Y , Horikawa H , Ankai A , Harada T , Hosoyama A , Oguchi A , Fukui S , Fujita N , Takami H , Takai K |
| Ref : DNA Research , 17 :123 , 2010 |
| Abstract : |
| PubMedSearch : Takaki_2010_DNA.Res_17_123 |
| PubMedID: 20189949 |
| Gene_locus related to this paper: defds-d3pdu6 , defds-metxa |
| Title : Deep-sea vent epsilon-proteobacterial genomes provide insights into emergence of pathogens - Nakagawa_2007_Proc.Natl.Acad.Sci.U.S.A_104_12146 |
| Author(s) : Nakagawa S , Takaki Y , Shimamura S , Reysenbach AL , Takai K , Horikoshi K |
| Ref : Proc Natl Acad Sci U S A , 104 :12146 , 2007 |
| Abstract : |
| PubMedSearch : Nakagawa_2007_Proc.Natl.Acad.Sci.U.S.A_104_12146 |
| PubMedID: 17615243 |
| Gene_locus related to this paper: nitsb-a6q4h5 , sulnb-a6q8i0 , sulnb-a6q8n3 , sulnb-a6q8n4 , sulnb-a6qb78 , sulnb-a6qch9 , nitsb-a6q4d8 , nitsb-a6q3x9 , sulnb-a6q912 |
| Title : Reduced genome of the thioautotrophic intracellular symbiont in a deep-sea clam, Calyptogena okutanii - Kuwahara_2007_Curr.Biol_17_881 |
| Author(s) : Kuwahara H , Yoshida T , Takaki Y , Shimamura S , Nishi S , Harada M , Matsuyama K , Takishita K , Kawato M , Uematsu K , Fujiwara Y , Sato T , Kato C , Kitagawa M , Kato I , Maruyama T |
| Ref : Current Biology , 17 :881 , 2007 |
| Abstract : |
| PubMedSearch : Kuwahara_2007_Curr.Biol_17_881 |
| PubMedID: 17493812 |
| Gene_locus related to this paper: vesoh-a5cvz2 |
| Title : Genomic characterization of thermophilic Geobacillus species isolated from the deepest sea mud of the Mariana Trench - Takami_2004_Extremophiles_8_351 |
| Author(s) : Takami H , Nishi S , Lu J , Shimamura S , Takaki Y |
| Ref : Extremophiles , 8 :351 , 2004 |
| Abstract : |
| PubMedSearch : Takami_2004_Extremophiles_8_351 |
| PubMedID: 15168170 |
| Gene_locus related to this paper: bac25-mglp |
| Title : Thermoadaptation trait revealed by the genome sequence of thermophilic Geobacillus kaustophilus - Takami_2004_Nucleic.Acids.Res_32_6292 |
| Author(s) : Takami H , Takaki Y , Chee GJ , Nishi S , Shimamura S , Suzuki H , Matsui S , Uchiyama I |
| Ref : Nucleic Acids Research , 32 :6292 , 2004 |
| Abstract : |
| PubMedSearch : Takami_2004_Nucleic.Acids.Res_32_6292 |
| PubMedID: 15576355 |
| Gene_locus related to this paper: bac25-mglp , geoka-q5kva3 , geoka-q5kvf2 , geoka-q5kvx7 , geoka-q5kvz7 , geoka-q5kzv8 , geoka-q5l1a6 , geoka-q5l1d4 , geoka-q5l1n0 , geoka-q5l1u3 , geoka-q5l3h0 , geotn-a4isp0 , geoka-g5eba9 |
| Title : Genome sequence of Oceanobacillus iheyensis isolated from the Iheya Ridge and its unexpected adaptive capabilities to extreme environments - Takami_2002_Nucleic.Acids.Res_30_3927 |
| Author(s) : Takami H , Takaki Y , Uchiyama I |
| Ref : Nucleic Acids Research , 30 :3927 , 2002 |
| Abstract : |
| PubMedSearch : Takami_2002_Nucleic.Acids.Res_30_3927 |
| PubMedID: 12235376 |
| Gene_locus related to this paper: oceih-DHBF , oceih-OB0234 , oceih-OB0300 , oceih-OB0444 , oceih-OB0462 , oceih-OB0555 , oceih-OB0606 , oceih-OB0639 , oceih-OB0706 , oceih-OB0923 , oceih-OB0925 , oceih-OB0963 , oceih-OB0990 , oceih-OB1045 , oceih-OB1074 , oceih-OB1081 , oceih-OB1195 , oceih-OB1231 , oceih-OB1264 , oceih-OB2095 , oceih-OB2324 , oceih-OB2429 , oceih-OB2431 , oceih-OB2463 , oceih-OB2742 , oceih-OB2952 , oceih-OB3344 , oceih-OB3377 |
| Title : Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis - Takami_2000_Nucleic.Acids.Res_28_4317 |
| Author(s) : Takami H , Nakasone K , Takaki Y , Maeno G , Sasaki R , Masui N , Fuji F , Hirama C , Nakamura Y , Ogasawara N , Kuhara S , Horikoshi K |
| Ref : Nucleic Acids Research , 28 :4317 , 2000 |
| Abstract : |
| PubMedSearch : Takami_2000_Nucleic.Acids.Res_28_4317 |
| PubMedID: 11058132 |
| Gene_locus related to this paper: bacha-BH0727 , bacha-BH0763 , bacha-BH0848 , bacha-BH0879 , bacha-BH1308 , bacha-BH1440 , bacha-BH1838 , bacha-BH1839 , bacha-BH2174 , bacha-BH2248 , bacha-BH2279 , bacha-BH2806 , bacha-BH2917 , bacha-BH3288 , bacha-BH3306 , bacha-BH3326 , bacha-BH3554 , bacha-BH3805 , bacha-BH3908 , bacha-YvaM , bachd-q9k8w0 , bachd-q9kbn0 |
| Title : An improved physical and genetic map of the genome of alkaliphilic Bacillus sp. C-125 - Takami_1999_Extremophiles_3_21 |
| Author(s) : Takami H , Nakasone K , Hirama C , Takaki Y , Masui N , Fuji F , Nakamura Y , Inoue A |
| Ref : Extremophiles , 3 :21 , 1999 |
| Abstract : |
| PubMedSearch : Takami_1999_Extremophiles_3_21 |
| PubMedID: 10086841 |