Kuhara S

References (20)

Title : Draft Genome Sequence of Thiostrepton-Producing Streptomyces azureus ATCC 14921 - Sakihara_2015_Genome.Announc_3_e01183
Author(s) : Sakihara K , Maeda J , Tashiro K , Fujino Y , Kuhara S , Ohshima T , Ogata S , Doi K
Ref : Genome Announc , 3 : , 2015
PubMedID: 26494661
Gene_locus related to this paper: straj-a0a0k8pgz2 , straj-a0a0k8pxt3

Title : Draft Genome Sequence of D-Branched-Chain Amino Acid Producer Lactobacillus otakiensis JCM 15040T, Isolated from a Traditional Japanese Pickle - Doi_2013_Genome.Announc_1_e00546
Author(s) : Doi K , Mori K , Mutaguchi Y , Tashiro K , Fujino Y , Ohmori T , Kuhara S , Ohshima T
Ref : Genome Announc , 1 : , 2013
PubMedID: 23929467
Gene_locus related to this paper: 9laco-s4nei2

Title : Draft Genome Sequence of Geobacillus kaustophilus GBlys, a Lysogenic Strain with Bacteriophage OH2 - Doi_2013_Genome.Announc_1_e00634
Author(s) : Doi K , Mori K , Martono H , Nagayoshi Y , Fujino Y , Tashiro K , Kuhara S , Ohshima T
Ref : Genome Announc , 1 :e00634 , 2013
PubMedID: 23950135
Gene_locus related to this paper: bac25-mglp , geoka-q5kvf2 , geoka-q5l3h0 , geotn-a4isp0

Title : Complete genome sequence of Bacillus cereus NC7401, which produces high levels of the emetic toxin cereulide - Takeno_2012_J.Bacteriol_194_4767
Author(s) : Takeno A , Okamoto A , Tori K , Oshima K , Hirakawa H , Toh H , Agata N , Yamada K , Ogasawara N , Hayashi T , Shimizu T , Kuhara S , Hattori M , Ohta M
Ref : Journal of Bacteriology , 194 :4767 , 2012
PubMedID: 22887669
Gene_locus related to this paper: bacce-c2zyv1

Title : Whole-genome sequencing of sake yeast Saccharomyces cerevisiae Kyokai no. 7 - Akao_2011_DNA.Res_18_423
Author(s) : Akao T , Yashiro I , Hosoyama A , Kitagaki H , Horikawa H , Watanabe D , Akada R , Ando Y , Harashima S , Inoue T , Inoue Y , Kajiwara S , Kitamoto K , Kitamoto N , Kobayashi O , Kuhara S , Masubuchi T , Mizoguchi H , Nakao Y , Nakazato A , Namise M , Oba T , Ogata T , Ohta A , Sato M , Shibasaki S , Takatsume Y , Tanimoto S , Tsuboi H , Nishimura A , Yoda K , Ishikawa T , Iwashita K , Fujita N , Shimoi H
Ref : DNA Research , 18 :423 , 2011
PubMedID: 21900213
Gene_locus related to this paper: yeast-YDR428C , yeast-hda1

Title : Whole-genome analyses reveal genetic instability of Acetobacter pasteurianus - Azuma_2009_Nucleic.Acids.Res_37_5768
Author(s) : Azuma Y , Hosoyama A , Matsutani M , Furuya N , Horikawa H , Harada T , Hirakawa H , Kuhara S , Matsushita K , Fujita N , Shirai M
Ref : Nucleic Acids Research , 37 :5768 , 2009
PubMedID: 19638423
Gene_locus related to this paper: acepa-c7jn35 , acepa-c7k2x1 , acepa-c7kgx1 , acepa-c7kzj8 , acepa-este2 , acepa-h1uu55 , acepa-c7jpi3 , acep3-c7jf97

Title : Complete genome sequence of Finegoldia magna, an anaerobic opportunistic pathogen - Goto_2008_DNA.Res_15_39
Author(s) : Goto T , Yamashita A , Hirakawa H , Matsutani M , Todo K , Ohshima K , Toh H , Miyamoto K , Kuhara S , Hattori M , Shimizu T , Akimoto S
Ref : DNA Research , 15 :39 , 2008
PubMedID: 18263572

Title : Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalis - Naito_2008_DNA.Res_15_215
Author(s) : Naito M , Hirakawa H , Yamashita A , Ohara N , Shoji M , Yukitake H , Nakayama K , Toh H , Yoshimura F , Kuhara S , Hattori M , Hayashi T
Ref : DNA Research , 15 :215 , 2008
PubMedID: 18524787
Gene_locus related to this paper: porgi-DPP , porgi-q7mub3 , porgi-q7muw6 , porgi-q7mwa7 , porgi-q7mx03

Title : Genome sequence of the cat pathogen, Chlamydophila felis - Azuma_2006_DNA.Res_13_15
Author(s) : Azuma Y , Hirakawa H , Yamashita A , Cai Y , Rahman MA , Suzuki H , Mitaku S , Toh H , Goto S , Murakami T , Sugi K , Hayashi H , Fukushi H , Hattori M , Kuhara S , Shirai M
Ref : DNA Research , 13 :15 , 2006
PubMedID: 16766509
Gene_locus related to this paper: chlff-q253e0 , chlff-q254l8

Title : Genome sequencing and analysis of Aspergillus oryzae - Machida_2005_Nature_438_1157
Author(s) : Machida M , Asai K , Sano M , Tanaka T , Kumagai T , Terai G , Kusumoto K , Arima T , Akita O , Kashiwagi Y , Abe K , Gomi K , Horiuchi H , Kitamoto K , Kobayashi T , Takeuchi M , Denning DW , Galagan JE , Nierman WC , Yu J , Archer DB , Bennett JW , Bhatnagar D , Cleveland TE , Fedorova ND , Gotoh O , Horikawa H , Hosoyama A , Ichinomiya M , Igarashi R , Iwashita K , Juvvadi PR , Kato M , Kato Y , Kin T , Kokubun A , Maeda H , Maeyama N , Maruyama J , Nagasaki H , Nakajima T , Oda K , Okada K , Paulsen I , Sakamoto K , Sawano T , Takahashi M , Takase K , Terabayashi Y , Wortman JR , Yamada O , Yamagata Y , Anazawa H , Hata Y , Koide Y , Komori T , Koyama Y , Minetoki T , Suharnan S , Tanaka A , Isono K , Kuhara S , Ogasawara N , Kikuchi H
Ref : Nature , 438 :1157 , 2005
PubMedID: 16372010
Gene_locus related to this paper: aspor-Q2U722 , aspfn-b8mvx2 , aspfn-b8mwk1 , aspfn-b8n1a4 , aspfn-b8n5l3 , aspfn-b8n7y0 , aspfn-b8n829 , aspfn-b8ncj5 , aspfn-b8nhj9 , aspfn-b8njx6 , aspfn-b8nsk2 , aspfu-q4wj61 , aspor-axe1 , aspor-CPI , aspor-cutas , aspor-cuti2 , aspor-DPPIV , aspor-faec , aspor-MDLB , aspor-ppme1 , aspor-q2tw11 , aspor-q2tw16 , aspor-q2tw28 , aspor-q2twc4 , aspor-q2twg0 , aspor-q2twj3 , aspor-q2twv2 , aspor-q2twv4 , aspor-q2tx21 , aspor-q2txq8 , aspor-q2tya1 , aspor-q2tyh6 , aspor-q2tyn9 , aspor-q2typ0 , aspor-q2tyq4 , aspor-q2tyv8 , aspor-q2tz03 , aspor-q2tzh3 , aspor-q2tzr5 , aspor-q2tzv9 , aspor-q2u0k7 , aspor-q2u0q2 , aspor-q2u0r6 , aspor-q2u1a5 , aspor-q2u1a6 , aspor-q2u1k0 , aspor-q2u1k8 , aspor-q2u1m8 , aspor-q2u2a1 , aspor-q2u2a4 , aspor-q2u3a3 , aspor-q2u3a6 , aspor-q2u3k5 , aspor-q2u3l6 , aspor-q2u4a0 , aspor-q2u4e0 , aspor-q2u4f6 , aspor-q2u4g6 , aspor-q2u4h9 , aspor-q2u4w9 , aspor-q2u4y8 , aspor-q2u5f5 , aspor-q2u5n3 , aspor-q2u5y8 , aspor-q2u6h7 , aspor-q2u6j5 , aspor-q2u6m8 , aspor-q2u6m9 , aspor-q2u6n6 , aspor-q2u7i2 , aspor-q2u7v0 , aspor-q2u8j8 , aspor-q2u8r1 , aspor-q2u8r4 , aspor-q2u8t5 , aspor-q2u8z3 , aspor-q2u9a1 , aspor-q2u9n5 , aspor-q2u144 , aspor-q2u161 , aspor-q2u185 , aspor-q2u199 , aspor-q2u212 , aspor-q2u331 , aspor-q2u348 , aspor-q2u400 , aspor-q2u453 , aspor-q2u489 , aspor-q2u704 , aspor-q2u728 , aspor-q2u798 , aspor-q2u822 , aspor-q2u854 , aspor-q2u875 , aspor-q2u908 , aspor-q2ua10 , aspor-q2ua48 , aspor-q2uab6 , aspor-q2uak9 , aspor-q2uaq4 , aspor-q2ub32 , aspor-q2ub76 , aspor-q2uba1 , aspor-q2ubd6 , aspor-q2ubm2 , aspor-q2ubr2 , aspor-q2uc28 , aspor-q2uc65 , aspor-q2uc77 , aspor-q2uc98 , aspor-q2uck0 , aspor-q2ucy7 , aspor-q2ud03 , aspor-q2ud06 , aspor-q2ud08 , aspor-q2ud23 , aspor-q2udn5 , aspor-q2udr0 , aspor-q2uec1 , aspor-q2uef3 , aspor-q2uf10 , aspor-q2uf27 , aspor-q2uf48 , aspor-q2ufd8 , aspor-q2ufe5 , aspor-q2ufm4 , aspor-q2ufr3 , aspor-q2ufz8 , aspor-q2ug78 , aspor-q2ugd6 , aspor-q2uge1 , aspor-q2ugg7 , aspor-q2ugi2 , aspor-q2ugl2 , aspor-q2ugy9 , aspor-q2uh24 , aspor-q2uh73 , aspor-q2uhe4 , aspor-q2uhf0 , aspor-q2uhj6 , aspor-q2uhn1 , aspor-q2uhq0 , aspor-q2ui56 , aspor-q2uib2 , aspor-q2uib5 , aspor-q2uie9 , aspor-q2uih1 , aspor-q2uii1 , aspor-q2uik9 , aspor-q2uiq0 , aspor-q2uiu1 , aspor-q2uix9 , aspor-q2uiy5 , aspor-q2uiz4 , aspor-q2uj89 , aspor-q2uja2 , aspor-q2uju3 , aspor-q2uk31 , aspor-q2uk42 , aspor-q2ukb6 , aspor-q2ukq7 , aspor-q2ul81 , aspor-q2uli9 , aspor-q2ulr2 , aspor-q2ulv7 , aspor-q2umf3 , aspor-q2umv2 , aspor-q2umx6 , aspor-q2unw5 , aspor-q2up23 , aspor-q2up89 , aspor-q2upe6 , aspor-q2upi1 , aspor-q2upl1 , aspor-q2upw4 , aspor-q2uq56 , aspor-q2uqb4 , aspor-q2uqm7 , aspor-q2ur58 , aspor-q2ur64 , aspor-q2ur80 , aspor-q2ur83 , aspor-q2ure7 , aspor-q2urf3 , aspor-q2urg5 , aspor-q2urq0 , aspor-q2urt4 , aspor-q2uru5 , aspor-q2usi0 , aspor-q2usp7 , aspor-q2usq8 , aspor-q2usv6 , aspor-q2uta5 , aspor-q2uu89 , aspor-q2uub4 , aspor-q2uux8 , aspor-q2uv29 , aspor-TGLA , aspor-q2ue03 , aspor-q2uj83 , aspno-a0a0l1j1c9

Title : Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection - Kuroda_2005_Proc.Natl.Acad.Sci.U.S.A_102_13272
Author(s) : Kuroda M , Yamashita A , Hirakawa H , Kumano M , Morikawa K , Higashide M , Maruyama A , Inose Y , Matoba K , Toh H , Kuhara S , Hattori M , Ohta T
Ref : Proc Natl Acad Sci U S A , 102 :13272 , 2005
PubMedID: 16135568
Gene_locus related to this paper: stas1-q4a0b8 , stas1-q4a0z3 , stas1-q4a018 , stas1-q4a076 , stas1-q4a169 , stas1-q49uw5 , stas1-q49vf8 , stas1-q49vg1 , stas1-q49vk0 , stas1-q49w07 , stas1-q49w20 , stas1-q49we3 , stas1-q49wg7 , stas1-q49ws3 , stas1-q49x95 , stas1-q49xp4 , stas1-q49yj4 , stas1-q49zd4 , stas1-q49zs7

Title : Genomic analysis of Bacteroides fragilis reveals extensive DNA inversions regulating cell surface adaptation - Kuwahara_2004_Proc.Natl.Acad.Sci.U.S.A_101_14919
Author(s) : Kuwahara T , Yamashita A , Hirakawa H , Nakayama H , Toh H , Okada N , Kuhara S , Hattori M , Hayashi T , Ohnishi Y
Ref : Proc Natl Acad Sci U S A , 101 :14919 , 2004
PubMedID: 15466707
Gene_locus related to this paper: bacfn-q5lh43 , bacfr-q64mh3 , bacfr-q64n33 , bacfr-q64qs3 , bacfr-q64t24 , bacfr-q64uj8 , bacfr-q64vl4 , bacfr-q64vx6 , bacfr-q64wh2 , bacfr-q64xp9 , bacfr-q64yv4 , bacfr-q650j0

Title : Complete genome sequence of Clostridium perfringens, an anaerobic flesh-eater - Shimizu_2002_Proc.Natl.Acad.Sci.U.S.A_99_996
Author(s) : Shimizu T , Ohtani K , Hirakawa H , Ohshima K , Yamashita A , Shiba T , Ogasawara N , Hattori M , Kuhara S , Hayashi H
Ref : Proc Natl Acad Sci U S A , 99 :996 , 2002
PubMedID: 11792842
Gene_locus related to this paper: clope-CPE0307 , clope-CPE0432 , clope-CPE1581 , clope-CPE1596 , clope-CPE1989 , clope-CPE2231 , clope-CPE2312 , clope-lipa , clope-LIPB , clope-PLDB

Title : Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 - Hayashi_2001_DNA.Res_8_11
Author(s) : Hayashi T , Makino K , Ohnishi M , Kurokawa K , Ishii K , Yokoyama K , Han CG , Ohtsubo E , Nakayama K , Murata T , Tanaka M , Tobe T , Iida T , Takami H , Honda T , Sasakawa C , Ogasawara N , Yasunaga T , Kuhara S , Shiba T , Hattori M , Shinagawa H
Ref : DNA Research , 8 :11 , 2001
PubMedID: 11258796
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-entf , ecoli-fes , ecoli-MCMK , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-Z1341 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR

Title : Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655 - Ohnishi_2000_Syst.Appl.Microbiol_23_315
Author(s) : Ohnishi M , Murata T , Nakayama K , Kuhara S , Hattori M , Kurokawa K , Yasunaga T , Yokoyama K , Makino K , Shinagawa H , Hayashi T
Ref : Syst Appl Microbiol , 23 :315 , 2000
PubMedID: 11108008

Title : Comparison of whole genome sequences of Chlamydia pneumoniae J138 from Japan and CWL029 from USA - Shirai_2000_Nucleic.Acids.Res_28_2311
Author(s) : Shirai M , Hirakawa H , Kimoto M , Tabuchi M , Kishi F , Ouchi K , Shiba T , Ishii K , Hattori M , Kuhara S , Nakazawa T
Ref : Nucleic Acids Research , 28 :2311 , 2000
PubMedID: 10871362
Gene_locus related to this paper: chlpn-CPJ0152 , chlpn-CPJ0342 , chlpn-CPN0161 , chlpn-CPN0271 , chlpn-q9jrv1 , chlpn-q9js10 , chlpn-q9k1u7 , chlpn-q9z6x9

Title : Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis - Takami_2000_Nucleic.Acids.Res_28_4317
Author(s) : Takami H , Nakasone K , Takaki Y , Maeno G , Sasaki R , Masui N , Fuji F , Hirama C , Nakamura Y , Ogasawara N , Kuhara S , Horikoshi K
Ref : Nucleic Acids Research , 28 :4317 , 2000
PubMedID: 11058132
Gene_locus related to this paper: bacha-BH0727 , bacha-BH0763 , bacha-BH0848 , bacha-BH0879 , bacha-BH1308 , bacha-BH1440 , bacha-BH1838 , bacha-BH1839 , bacha-BH2174 , bacha-BH2248 , bacha-BH2279 , bacha-BH2806 , bacha-BH2917 , bacha-BH3288 , bacha-BH3306 , bacha-BH3326 , bacha-BH3554 , bacha-BH3805 , bacha-BH3908 , bacha-YvaM , bachd-q9k8w0 , bachd-q9kbn0

Title : Complete nucleotide sequences of 93-kb and 3.3-kb plasmids of an enterohemorrhagic Escherichia coli O157:H7 derived from Sakai outbreak - Makino_1998_DNA.Res_5_1
Author(s) : Makino K , Ishii K , Yasunaga T , Hattori M , Yokoyama K , Yutsudo CH , Kubota Y , Yamaichi Y , Iida T , Yamamoto K , Honda T , Han CG , Ohtsubo E , Kasamatsu M , Hayashi T , Kuhara S , Shinagawa H
Ref : DNA Research , 5 :1 , 1998
PubMedID: 9628576
Gene_locus related to this paper: ecoli-ypt1