lacrh-pepr

Lactobacillus rhamnosus, Lactobacillus casei, Lactobacillus paracasei , Lactobacillus zeae, Prolyl aminopeptidase pepR gene

Comment

Other strains: Lactobacillus rhamnosus (strains Lc 705\; ATCC 53103 \/ GG\; LMS2-1\; HN001\; ATCC 8530\; ATCC 21052\; R0011\; LRHMDP3\; LRHMDP2\; LOCK900\; 2166) Lactobacillus casei (strains Zhang\; BD-II\; W56\; 12A\; M36\; 32G\; 21\/1\; A2-362\; CRF28\; UCD174\; T71499\; UW1\; UW4\; Lc-10\; Lpc-37\; LOCK919\; 5b\; N1115) Lactobacillus casei (BL23\; ATCC 334) Lactobacillus paracasei (subsp. paracasei (Lpp230\; Lpp122\; Lpp17\; Lpp46\; Lpp226\; Lpp22\; Lpp120\; Lpp225\; Lpp223\; Lpp219\; CNCM I-4270\; Lpp74\; Lpp229\; Lpp189\; Lpp14\; Lpp228\; Lpp41\; Lpp126\; Lpp71\; Lpl14\; Lpp37\; Lpp43\; Lpp7\; Lpp49\; Lpp227\; CNCM I-4648\; CNCM I-2877\; Lpp70\; Lpp125\; JCM 8130 8700:2\; ATCC 25302)\; subsp. tolerans Lpl7), Lactobacillus zeae

Relationship

Family : Proline_iminopeptidase

Block : X

Position in NCBI Life Tree : Lactobacillus rhamnosus

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Bacteria N E > Terrabacteria group N E > Firmicutes N E > Bacilli N E > Lactobacillales N E > Lactobacillaceae N E > Lactobacillus N E > Lactobacillus rhamnosus N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

MKQGTTILTL DNGYHLWTNT QGEGDIHLLC LHGGPGGTHE YWENFGEELA DLGVQVHMYD QLGSFYSDQP DYSDPEIAKK YLTTDYFLGE VEEVRKKLGL DHFYLIGQSW GGALTQLYAL KYGQHLKGAI ISSMVDNINE YVEHINLVRE EALPPSAVKY MKKIEKAGDW DDPQYQKYVD VLNRGYVDRK QPPAISHLIS TMATPVYNAF QGDNEFVVTG KLKDWDISDQ IHNIKVPTLL TFGEHETMPL KAAQRMAEVI PHARLVTTPN GGHHHMIDNA PVYFKHLKQF ISDVENGTFN D

References (17)

Title : Whole Genome Sequence of the Probiotic Strain Lactobacillus paracasei N1115, Isolated from Traditional Chinese Fermented Milk - Wang_2014_Genome.Announc_2_e00059
Author(s) : Wang S , Zhu H , He F , Luo Y , Kang Z , Lu C , Feng L , Lu X , Xue Y , Wang H
Ref : Genome Announc , 2 : , 2014
PubMedID: 24625864
Gene_locus related to this paper: lacc3-q03b36 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Genome Sequence Analysis of the Biogenic Amine-Degrading Strain Lactobacillus casei 5b - Ladero_2014_Genome.Announc_2_e01199
Author(s) : Ladero V , Herrero-Fresno A , Martinez N , Del Rio B , Linares DM , Fernandez M , Martin MC , Alvarez MA
Ref : Genome Announc , 2 : , 2014
PubMedID: 24435875
Gene_locus related to this paper: lacc3-q03b36 , laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Draft Genome Sequence of Lactobacillus rhamnosus 2166 - Karlyshev_2014_Genome.Announc_2_e01222
Author(s) : Karlyshev AV , Melnikov VG , Kosarev IV , Abramov VM
Ref : Genome Announc , 2 : , 2014
PubMedID: 24558254
Gene_locus related to this paper: lacrh-pepr , lacrl-pip

Title : Genomic adaptation of the Lactobacillus casei group - Toh_2013_PLoS.One_8_e75073
Author(s) : Toh H , Oshima K , Nakano A , Takahata M , Murakami M , Takaki T , Nishiyama H , Igimi S , Hattori M , Morita H
Ref : PLoS ONE , 8 :e75073 , 2013
PubMedID: 24116025
Gene_locus related to this paper: lacc3-q03b36 , laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Complete Genome Sequence of the Probiotic Strain Lactobacillus casei (Formerly Lactobacillus paracasei) LOCK919 - Koryszewska-Baginska_2013_Genome.Announc_1_e00758
Author(s) : Koryszewska-Baginska A , Aleksandrzak-Piekarczyk T , Bardowski J
Ref : Genome Announc , 1 : , 2013
PubMedID: 24072862
Gene_locus related to this paper: lacc3-q03b36 , laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88 , lacca-s4zmx9

Title : Draft Genome Sequences of Two Clinical Isolates of Lactobacillus rhamnosus from Initial Stages of Dental Pulp Infection - Chen_2013_Genome.Announc_1_E00073
Author(s) : Chen Z , Wilkins MR , Hunter N , Nadkarni MA
Ref : Genome Announc , 1 : , 2013
PubMedID: 23405363
Gene_locus related to this paper: lacrh-B2CZF3 , lacrh-pepr , lacrl-pip

Title : Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation - Broadbent_2012_BMC.Genomics_13_533
Author(s) : Broadbent JR , Neeno-Eckwall EC , Stahl B , Tandee K , Cai H , Morovic W , Horvath P , Heidenreich J , Perna NT , Barrangou R , Steele JL
Ref : BMC Genomics , 13 :533 , 2012
PubMedID: 23035691
Gene_locus related to this paper: lacc3-q03b36 , laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Draft genome sequence of Lactobacillus casei W56 - Hochwind_2012_J.Bacteriol_194_6638
Author(s) : Hochwind K , Weinmaier T , Schmid M , van Hemert S , Hartmann A , Rattei T , Rothballer M
Ref : Journal of Bacteriology , 194 :6638 , 2012
PubMedID: 23144392
Gene_locus related to this paper: laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Draft genome sequence of probiotic strain Lactobacillus rhamnosus R0011 - Tompkins_2012_J.Bacteriol_194_902
Author(s) : Tompkins TA , Barreau G , de Carvalho VG
Ref : Journal of Bacteriology , 194 :902 , 2012
PubMedID: 22275100
Gene_locus related to this paper: lacrh-pepr , lacrl-pip

Title : Genome sequence of Lactobacillus rhamnosus ATCC 8530 - Pittet_2012_J.Bacteriol_194_726
Author(s) : Pittet V , Ewen E , Bushell BR , Ziola B
Ref : Journal of Bacteriology , 194 :726 , 2012
PubMedID: 22247527
Gene_locus related to this paper: lacrh-pepr , lacrl-pip

Title : Complete genome sequence of the probiotic strain Lactobacillus casei BD-II - Ai_2011_J.Bacteriol_193_3160
Author(s) : Ai L , Chen C , Zhou F , Wang L , Zhang H , Chen W , Guo B
Ref : Journal of Bacteriology , 193 :3160 , 2011
PubMedID: 21478345
Gene_locus related to this paper: lacc3-q03b36 , lacc3-q035l1 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Complete genome sequence of Lactobacillus casei Zhang, a new probiotic strain isolated from traditional homemade koumiss in Inner Mongolia, China - Zhang_2010_J.Bacteriol_192_5268
Author(s) : Zhang W , Yu D , Sun Z , Wu R , Chen X , Chen W , Meng H , Hu S , Zhang H
Ref : Journal of Bacteriology , 192 :5268 , 2010
PubMedID: 20675486
Gene_locus related to this paper: lacc3-q03b36 , lacc3-q035l1 , laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Complete genome sequence of the probiotic Lactobacillus casei strain BL23 - Maze_2010_J.Bacteriol_192_2647
Author(s) : Maze A , Boel G , Zuniga M , Bourand A , Loux V , Yebra MJ , Monedero V , Correia K , Jacques N , Beaufils S , Poncet S , Joyet P , Milohanic E , Casaregola S , Auffray Y , Perez-Martinez G , Gibrat JF , Zagorec M , Francke C , Hartke A , Deutscher J
Ref : Journal of Bacteriology , 192 :2647 , 2010
PubMedID: 20348264
Gene_locus related to this paper: lacc3-q03b36 , lacc3-q036j3 , lacca-q6edz1 , laccb-b3w942 , laccb-b3wcx2 , lacrh-pepr

Title : Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein - Kankainen_2009_Proc.Natl.Acad.Sci.U.S.A_106_17193
Author(s) : Kankainen M , Paulin L , Tynkkynen S , von Ossowski I , Reunanen J , Partanen P , Satokari R , Vesterlund S , Hendrickx AP , Lebeer S , De Keersmaecker SC , Vanderleyden J , Hamalainen T , Laukkanen S , Salovuori N , Ritari J , Alatalo E , Korpela R , Mattila-Sandholm T , Lassig A , Hatakka K , Kinnunen KT , Karjalainen H , Saxelin M , Laakso K , Surakka A , Palva A , Salusjarvi T , Auvinen P , de Vos WM
Ref : Proc Natl Acad Sci U S A , 106 :17193 , 2009
PubMedID: 19805152
Gene_locus related to this paper: lacrg-c7tei3 , lacrh-B2CZF3 , lacrh-b5qmk1 , lacrh-pepr , lacrh-pepx , lacrl-pip

Title : Complete genome sequence of the probiotic Lactobacillus rhamnosus ATCC 53103 - Morita_2009_J.Bacteriol_191_7630
Author(s) : Morita H , Toh H , Oshima K , Murakami M , Taylor TD , Igimi S , Hattori M
Ref : Journal of Bacteriology , 191 :7630 , 2009
PubMedID: 19820099
Gene_locus related to this paper: lacrg-c7tei3 , lacrh-B2CZF3 , lacrh-b5qmk1 , lacrh-pepr , lacrh-pepx , lacrl-pip

Title : Comparative genomics of the lactic acid bacteria - Makarova_2006_Proc.Natl.Acad.Sci.U.S.A_103_15611
Author(s) : Makarova K , Slesarev A , Wolf Y , Sorokin A , Mirkin B , Koonin E , Pavlov A , Pavlova N , Karamychev V , Polouchine N , Shakhova V , Grigoriev I , Lou Y , Rohksar D , Lucas S , Huang K , Goodstein DM , Hawkins T , Plengvidhya V , Welker D , Hughes J , Goh Y , Benson A , Baldwin K , Lee JH , Diaz-Muniz I , Dosti B , Smeianov V , Wechter W , Barabote R , Lorca G , Altermann E , Barrangou R , Ganesan B , Xie Y , Rawsthorne H , Tamir D , Parker C , Breidt F , Broadbent J , Hutkins R , O'Sullivan D , Steele J , Unlu G , Saier M , Klaenhammer T , Richardson P , Kozyavkin S , Weimer B , Mills D
Ref : Proc Natl Acad Sci U S A , 103 :15611 , 2006
PubMedID: 17030793
Gene_locus related to this paper: 9laco-c0xef2 , lacba-pepx , lacba-q03pm4 , lacba-q03sl1 , lacc3-pepx , lacc3-q03b36 , lacc3-q033u9 , lacc3-q035l1 , lacc3-q036j3 , lacc3-q036j8 , laccb-b3wcx2 , lacda-q1g8l1 , lacdb-q04b33 , lacdb-q04bn2 , lacdb-q04ci8 , lacdb-q04cw3 , lacdl-pepx , lacdl-pip , lacga-q040j4 , lacga-q040j9 , lacga-q040s2 , lacga-q042h9 , lacga-q043a3 , lacga-q043m1 , lacga-q045l3 , lacga-q046w1 , lacga-q047a5 , lacjo-q74hh0 , lacjo-q74ii3 , lacla-pepx , laclk-d2bl62 , lacls-q02y15 , lacls-q030e4 , lacls-q030p2 , lacrh-pepr , leumc-c2kjv5 , leumm-q03x93 , leumm-q03y60 , leumm-q03y71 , leumm-q03z72 , oenob-q04d10 , oenob-q04f06 , oenob-q04f19 , oenob-q04fw8 , oenob-q04ga3 , oenob-q04h47 , oenoe-a0nif9 , oenoe-a0nl98 , oenoe-d3lb54 , pedpa-pepx , pedpa-q03gh4 , pedpa-q03h47 , pedpa-q03hj2 , strt1-q5lz16 , strt1-q5lza1 , strt2-q5m420 , strtr-pepx , oenoe-k6pl10 , lacba-pip , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88 , pedpa-q03hz6 , oenob-q04dp7

Title : Cloning and characterization of a prolinase gene (pepR) from Lactobacillus rhamnosus - Varmanen_1998_Appl.Environ.Microbiol_64_1831
Author(s) : Varmanen P , Rantanen T , Palva A , Tynkkynen S
Ref : Applied Environmental Microbiology , 64 :1831 , 1998
PubMedID: 9572959
Gene_locus related to this paper: lacrh-pepr