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agrtu-ACVB

Agrobacterium tumefaciens; Agrobacterium radiobacter; Agrobacterium fabrum, virulence protein b

Comment

Agrobacterium radiobacter || Q9R2G1 The octopine-type Ti plasmid pTiA6 of Agrobacterium tumefaciens contains a gene homologous to the chromosomal virulence gene acvB. almost identical except C-term. We didn't create a separate entry for it. Q8UCG5 is the chromosomal entry Q44405 idem Wirawan et al. Kang et al. Q9R2G1 Kalogeraki et al || Other strains: Agrobacterium tumefaciens complex Rhizobium radiobacter (Agrobacterium tumefaciens) (strain C58 \/ ATCC 33970)\; Agrobacterium radiobacter(strain C58)\; Agrobacterium fabrum (strain C58 \/ ATCC 33970)\; Agrobacterium sp. || (Agrobacterium radiobacter, strain C58))

Relationship

Family : VirJ

Block : X

Position in NCBI Life Tree : Agrobacterium tumefaciens

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Bacteria N E > Proteobacteria N E > Alphaproteobacteria N E > Rhizobiales N E > Rhizobiaceae N E > Rhizobium\/Agrobacterium group N E > Agrobacterium N E > Agrobacterium tumefaciens complex N E > Agrobacterium tumefaciens N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

MMKRNLIGAF IAASTLLSSS VAFSQDKPAY ETGMIPADHI MVPDGDIQAS IFLISDANGW TEADETRAKA LVEKGAAVVG IDFKEYLKAL EADDDECIYM ISDIESLSQQ IQRTAGTGSY RLPIVTGIGK GGTLALAMIA QSPVSTVREA VAVDPKAGLP LEKILCTPAT KDKVDGETVY GLTDGALPAP VSVIFTPDAD QKGRDHVNAL VKLHSDIEVT DVTDKADEVL TQTLSDKVDA AGDSGNPLGL PITVLEAKPV MDTMAVIYSG DGGWRDLDEE VGSALQKQGV PVIGVDALRY FWKEKDPKEV AGDLARIIDT YRKEWKVKNV VLIGYSFGAD IIPATYNLLP DRVKSSVAQL SLLGLSNEVD FEISVQGWLG VAGEGKGGKT VDDIAKIDPK LVQCVYGTEE EDEDPCPGLK AKGVETIGIE GGHHFDEDYE ALAKRIVTSL KTRLAK

References (5)

Title : The genome of the natural genetic engineer Agrobacterium tumefaciens C58 - Wood_2001_Science_294_2317
Author(s) : Wood DW , Setubal JC , Kaul R , Monks DE , Kitajima JP , Okura VK , Zhou Y , Chen L , Wood GE , Almeida NF, Jr. , Woo L , Chen Y , Paulsen IT , Eisen JA , Karp PD , Bovee D, Sr. , Chapman P , Clendenning J , Deatherage G , Gillet W , Grant C , Kutyavin T , Levy R , Li MJ , McClelland E , Palmieri A , Raymond C , Rouse G , Saenphimmachak C , Wu Z , Romero P , Gordon D , Zhang S , Yoo H , Tao Y , Biddle P , Jung M , Krespan W , Perry M , Gordon-Kamm B , Liao L , Kim S , Hendrick C , Zhao ZY , Dolan M , Chumley F , Tingey SV , Tomb JF , Gordon MP , Olson MV , Nester EW
Ref : Science , 294 :2317 , 2001
Abstract :
PubMedSearch : Wood_2001_Science_294_2317
PubMedID: 11743193
Gene_locus related to this paper: agrt5-a9cf94 , agrt5-a9cfa9 , agrt5-a9cfs8 , agrt5-a9cfu7 , agrt5-a9cie7 , agrt5-a9cj11 , agrt5-a9cjp2 , agrt5-a9cki2 , agrt5-a9ckr2 , agrt5-a9ckt2 , agrt5-a9cle4 , agrt5-a9clq8 , agrt5-a9clq9 , agrt5-q7cx24 , agrt5-q7d1j0 , agrt5-q7d1j3 , agrt5-q7d3m5 , agrt5-y5261 , agrtu-ACVB , agrtu-ATTS , agrtu-ATU0253 , agrtu-ATU0403 , agrtu-ATU0841 , agrtu-ATU1045 , agrtu-ATU1102 , agrtu-ATU1572 , agrtu-ATU1617 , agrtu-ATU1826 , agrtu-ATU1842 , agrtu-ATU2061 , agrtu-ATU2126 , agrtu-ATU2171 , agrtu-ATU2409 , agrtu-ATU2452 , agrtu-ATU2481 , agrtu-ATU2497 , agrtu-ATU2576 , agrtu-ATU3428 , agrtu-ATU3651 , agrtu-ATU3652 , agrtu-ATU4238 , agrtu-ATU5190 , agrtu-ATU5193 , agrtu-ATU5275 , agrtu-ATU5296 , agrtu-ATU5348 , agrtu-ATU5389 , agrtu-ATU5446 , agrtu-ATU5495 , agrtu-CPO , agrtu-DHAA , agrtu-DLHH , agrtu-EPHA , agrtu-GRST , agrtu-PCA , agrtu-PCAD , agrtu-PHBC , agrtu-PTRB , agrt5-a9cji8

Title : Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58 - Goodner_2001_Science_294_2323
Author(s) : Goodner B , Hinkle G , Gattung S , Miller N , Blanchard M , Qurollo B , Goldman BS , Cao Y , Askenazi M , Halling C , Mullin L , Houmiel K , Gordon J , Vaudin M , Iartchouk O , Epp A , Liu F , Wollam C , Allinger M , Doughty D , Scott C , Lappas C , Markelz B , Flanagan C , Crowell C , Gurson J , Lomo C , Sear C , Strub G , Cielo C , Slater S
Ref : Science , 294 :2323 , 2001
Abstract :
PubMedSearch : Goodner_2001_Science_294_2323
PubMedID: 11743194
Gene_locus related to this paper: agrt5-a9cf94 , agrt5-a9cfa9 , agrt5-a9cfs8 , agrt5-a9cfu7 , agrt5-a9cie7 , agrt5-a9cj11 , agrt5-a9cjp2 , agrt5-a9cki2 , agrt5-a9ckr2 , agrt5-a9ckt2 , agrt5-a9cle4 , agrt5-a9clq8 , agrt5-a9clq9 , agrt5-q7cx24 , agrt5-q7d1j0 , agrt5-q7d1j3 , agrt5-q7d3m5 , agrt5-q7d3t6 , agrt5-y5261 , agrtu-ACVB , agrtu-ATTS , agrtu-ATU0253 , agrtu-ATU0403 , agrtu-ATU0841 , agrtu-ATU1045 , agrtu-ATU1102 , agrtu-ATU1572 , agrtu-ATU1617 , agrtu-ATU1826 , agrtu-ATU1842 , agrtu-ATU2061 , agrtu-ATU2126 , agrtu-ATU2171 , agrtu-ATU2409 , agrtu-ATU2452 , agrtu-ATU2481 , agrtu-ATU2497 , agrtu-ATU2576 , agrtu-ATU3428 , agrtu-ATU3651 , agrtu-ATU3652 , agrtu-ATU4238 , agrtu-ATU5190 , agrtu-ATU5193 , agrtu-ATU5275 , agrtu-ATU5296 , agrtu-ATU5348 , agrtu-ATU5389 , agrtu-ATU5446 , agrtu-ATU5495 , agrtu-CPO , agrtu-DHAA , agrtu-DLHH , agrtu-EPHA , agrtu-GRST , agrtu-PCA , agrtu-PCAD , agrtu-PHBC , agrtu-PTRB , agrt5-a9cji8

Title : The octopine-type Ti plasmid pTiA6 of Agrobacterium tumefaciens contains a gene homologous to the chromosomal virulence gene acvB - Kalogeraki_1995_J.Bacteriol_177_892
Author(s) : Kalogeraki VS , Winans SC
Ref : Journal of Bacteriology , 177 :892 , 1995
Abstract :
PubMedSearch : Kalogeraki_1995_J.Bacteriol_177_892
PubMedID: 7860597
Gene_locus related to this paper: agrra-VIRJ , agrtu-ACVB

Title : Cellular localization and functional analysis of the protein encoded by the chromosomal virulence gene(acvB) of Agrobacterium tumefaciens - Kang_1994_Biosci.Biotechnol.Biochem_58_2024
Author(s) : Kang HW , Wirawan IG , Kojima M
Ref : Biosci Biotechnol Biochem , 58 :2024 , 1994
Abstract :
PubMedSearch : Kang_1994_Biosci.Biotechnol.Biochem_58_2024
PubMedID: 7765595
Gene_locus related to this paper: agrtu-ACVB

Title : Isolation and characterization of a new chromosomal virulence gene of Agrobacterium tumefaciens - Wirawan_1993_J.Bacteriol_175_3208
Author(s) : Wirawan IG , Kang HW , Kojima M
Ref : Journal of Bacteriology , 175 :3208 , 1993
Abstract :
PubMedSearch : Wirawan_1993_J.Bacteriol_175_3208
PubMedID: 8491736
Gene_locus related to this paper: agrtu-ACVB