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agrtu-DHAA

Agrobacterium tumefaciens, Agrobacterium radiobacter, haloalkane dehalogenase DatA

Comment

Other strains: Agrobacterium tumefaciens (strain C58 \/ ATCC 33970) Agrobacterium radiobacter (strain K84 \/ ATCC BAA-868) Rhizobium radiobacter (Agrobacterium tumefaciens)

Relationship

Family : Haloalkane_dehalogenase-HLD2

Block : X

Position in NCBI Life Tree : Agrobacterium tumefaciens

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Bacteria N E > Proteobacteria N E > Alphaproteobacteria N E > Rhizobiales N E > Rhizobiaceae N E > Rhizobium\/Agrobacterium group N E > Agrobacterium N E > Agrobacterium tumefaciens complex N E > Agrobacterium tumefaciens N E

Molecular evidence

Database

Sequence

Peptide

MKEHRHMTEK SPHSAFGDGA KAYDVPAFGL QIHTVEHGSG APIVFLHGNP TSSYLWRHIF RRLHGHGRLL AVDLIGYGQS SKPDIEYTLE NQQRYVDAWF DALDLRNVTL VLQDYGAAFG LNWASRNPDR VRAVAFFEPV LRNIDSVDLS PEFVTRRAKL RQPGEGEIFV QQENRFLTEL FPWFFLTPLA PEDLRQYQTP FPTPHSRKAI LAGPRNLPVD GEPASTVAFL EQAVNWLNTS DTPKLLLTFK PGFLLTDAIL KWSQVTIRNL EIEAAGAGIH FVQEEQPETI ARLLDAWLTR IAGN

References (5)

Title : Crystal structure of the novel haloalkane dehalogenase DatA from Agrobacterium tumefaciens C58 reveals a special halide-stabilizing pair and enantioselectivity mechanism - Guan_2014_Appl.Microbiol.Biotechnol_98_8573
Author(s) : Guan L , Yabuki H , Okai M , Ohtsuka J , Tanokura M
Ref : Applied Microbiology & Biotechnology , 98 :8573 , 2014
Abstract :
PubMedSearch : Guan_2014_Appl.Microbiol.Biotechnol_98_8573
PubMedID: 24770384
Gene_locus related to this paper: agrtu-DHAA

Title : Substrate specificity of haloalkane dehalogenases - Koudelakova_2011_Biochem.J_435_345
Author(s) : Koudelakova T , Chovancova E , Brezovsky J , Monincova M , Fortova A , Jarkovsky J , Damborsky J
Ref : Biochemical Journal , 435 :345 , 2011
Abstract :
PubMedSearch : Koudelakova_2011_Biochem.J_435_345
PubMedID: 21294712
Gene_locus related to this paper: agrtu-DHAA , brael-e2rv62 , braja-dhaa , myctu-linb , myctu-Rv1833c , rhoba-DHLA , rhoso-halo1 , sphpi-linb , xanau-halo1

Title : Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria - Slater_2009_J.Bacteriol_191_2501
Author(s) : Slater SC , Goldman BS , Goodner B , Setubal JC , Farrand SK , Nester EW , Burr TJ , Banta L , Dickerman AW , Paulsen I , Otten L , Suen G , Welch R , Almeida NF , Arnold F , Burton OT , Du Z , Ewing A , Godsy E , Heisel S , Houmiel KL , Jhaveri J , Lu J , Miller NM , Norton S , Chen Q , Phoolcharoen W , Ohlin V , Ondrusek D , Pride N , Stricklin SL , Sun J , Wheeler C , Wilson L , Zhu H , Wood DW
Ref : J. Bacteriol , 191 :2501 , 2009
Abstract :
PubMedSearch : Slater_2009_J.Bacteriol_191_2501
PubMedID: 19251847
Gene_locus related to this paper: agrrk-b9j7k2 , agrrk-b9j8e4 , agrrk-b9j8g5 , agrrk-b9j9n4 , agrrk-b9j9p4 , agrrk-b9ja88 , agrrk-b9jbs5 , agrrk-b9jd67 , agrrk-b9jd85 , agrrk-b9jfh5 , agrrk-b9jfj6 , agrrk-b9jfu6 , agrrk-b9jfy6 , agrrk-b9jh78 , agrrk-b9ji04 , agrrk-b9jih5 , agrrk-b9jih7 , agrrk-b9jj14 , agrrk-b9jjt5 , agrrk-b9jjt6 , agrrk-b9jk42 , agrrk-b9jki6 , agrrk-b9jkt4 , agrrk-b9jla0 , agrrk-b9jlc3 , agrrk-b9jlj1 , agrrk-b9jlj2 , agrrk-b9jlr1 , agrrk-b9jmj9 , agrrk-b9jml0 , agrrk-b9jmn1 , agrrk-b9jnw6 , agrrk-b9jq01 , agrrk-b9jq11 , agrrk-b9jq35 , agrtu-DHAA , agrvs-b9jqv2 , agrvs-b9jr09 , agrvs-b9js24 , agrvs-b9js61 , agrvs-b9ju03 , agrvs-b9jw40 , agrvs-b9jx20 , agrvs-b9jy84 , agrvs-b9k1h8 , agrvs-b9k2m9 , agrvs-b9k3r6 , agrvs-b9k5p9 , agrvs-b9k093 , agrvs-b9k188 , agrvs-b9k312 , agrrk-b9jls9 , agrrk-b9jca1 , agrvs-b9jur1 , agrrk-rutd

Title : The genome of the natural genetic engineer Agrobacterium tumefaciens C58 - Wood_2001_Science_294_2317
Author(s) : Wood DW , Setubal JC , Kaul R , Monks DE , Kitajima JP , Okura VK , Zhou Y , Chen L , Wood GE , Almeida NF, Jr. , Woo L , Chen Y , Paulsen IT , Eisen JA , Karp PD , Bovee D, Sr. , Chapman P , Clendenning J , Deatherage G , Gillet W , Grant C , Kutyavin T , Levy R , Li MJ , McClelland E , Palmieri A , Raymond C , Rouse G , Saenphimmachak C , Wu Z , Romero P , Gordon D , Zhang S , Yoo H , Tao Y , Biddle P , Jung M , Krespan W , Perry M , Gordon-Kamm B , Liao L , Kim S , Hendrick C , Zhao ZY , Dolan M , Chumley F , Tingey SV , Tomb JF , Gordon MP , Olson MV , Nester EW
Ref : Science , 294 :2317 , 2001
Abstract :
PubMedSearch : Wood_2001_Science_294_2317
PubMedID: 11743193
Gene_locus related to this paper: agrt5-a9cf94 , agrt5-a9cfa9 , agrt5-a9cfs8 , agrt5-a9cfu7 , agrt5-a9cie7 , agrt5-a9cj11 , agrt5-a9cjp2 , agrt5-a9cki2 , agrt5-a9ckr2 , agrt5-a9ckt2 , agrt5-a9cle4 , agrt5-a9clq8 , agrt5-a9clq9 , agrt5-q7cx24 , agrt5-q7d1j0 , agrt5-q7d1j3 , agrt5-q7d3m5 , agrt5-y5261 , agrtu-ACVB , agrtu-ATTS , agrtu-ATU0253 , agrtu-ATU0403 , agrtu-ATU0841 , agrtu-ATU1045 , agrtu-ATU1102 , agrtu-ATU1572 , agrtu-ATU1617 , agrtu-ATU1826 , agrtu-ATU1842 , agrtu-ATU2061 , agrtu-ATU2126 , agrtu-ATU2171 , agrtu-ATU2409 , agrtu-ATU2452 , agrtu-ATU2481 , agrtu-ATU2497 , agrtu-ATU2576 , agrtu-ATU3428 , agrtu-ATU3651 , agrtu-ATU3652 , agrtu-ATU4238 , agrtu-ATU5190 , agrtu-ATU5193 , agrtu-ATU5275 , agrtu-ATU5296 , agrtu-ATU5348 , agrtu-ATU5389 , agrtu-ATU5446 , agrtu-ATU5495 , agrtu-CPO , agrtu-DHAA , agrtu-DLHH , agrtu-EPHA , agrtu-GRST , agrtu-PCA , agrtu-PCAD , agrtu-PHBC , agrtu-PTRB , agrt5-a9cji8

Title : Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58 - Goodner_2001_Science_294_2323
Author(s) : Goodner B , Hinkle G , Gattung S , Miller N , Blanchard M , Qurollo B , Goldman BS , Cao Y , Askenazi M , Halling C , Mullin L , Houmiel K , Gordon J , Vaudin M , Iartchouk O , Epp A , Liu F , Wollam C , Allinger M , Doughty D , Scott C , Lappas C , Markelz B , Flanagan C , Crowell C , Gurson J , Lomo C , Sear C , Strub G , Cielo C , Slater S
Ref : Science , 294 :2323 , 2001
Abstract :
PubMedSearch : Goodner_2001_Science_294_2323
PubMedID: 11743194
Gene_locus related to this paper: agrt5-a9cf94 , agrt5-a9cfa9 , agrt5-a9cfs8 , agrt5-a9cfu7 , agrt5-a9cie7 , agrt5-a9cj11 , agrt5-a9cjp2 , agrt5-a9cki2 , agrt5-a9ckr2 , agrt5-a9ckt2 , agrt5-a9cle4 , agrt5-a9clq8 , agrt5-a9clq9 , agrt5-q7cx24 , agrt5-q7d1j0 , agrt5-q7d1j3 , agrt5-q7d3m5 , agrt5-q7d3t6 , agrt5-y5261 , agrtu-ACVB , agrtu-ATTS , agrtu-ATU0253 , agrtu-ATU0403 , agrtu-ATU0841 , agrtu-ATU1045 , agrtu-ATU1102 , agrtu-ATU1572 , agrtu-ATU1617 , agrtu-ATU1826 , agrtu-ATU1842 , agrtu-ATU2061 , agrtu-ATU2126 , agrtu-ATU2171 , agrtu-ATU2409 , agrtu-ATU2452 , agrtu-ATU2481 , agrtu-ATU2497 , agrtu-ATU2576 , agrtu-ATU3428 , agrtu-ATU3651 , agrtu-ATU3652 , agrtu-ATU4238 , agrtu-ATU5190 , agrtu-ATU5193 , agrtu-ATU5275 , agrtu-ATU5296 , agrtu-ATU5348 , agrtu-ATU5389 , agrtu-ATU5446 , agrtu-ATU5495 , agrtu-CPO , agrtu-DHAA , agrtu-DLHH , agrtu-EPHA , agrtu-GRST , agrtu-PCA , agrtu-PCAD , agrtu-PHBC , agrtu-PTRB , agrt5-a9cji8