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lacpa-s2rz88

Lactobacillus paracasei subsp. paracasei; Lactobacillus casei. Uncharacterized protein

Comment

Other strains: Lactobacillus casei Lpc-37\; W56\; 32G\; 5b\; UW1\; BD-II\; LOCK919\; M36\; LC2W\; ATCC 334 12A\; Lc-10\; T71499\; 21\/1\; A2-362\; UCD174\; BL23\; UW4\; Zhang Lactobacillus paracasei subsp. paracasei Lpp126\; Lpp122\; Lpp125\; CNCM I-2877\; Lpp41\; Lpp71\; Lpp228\; Lpp227\; Lpp74\; CNCM I-4270\; Lpp189\; 8700:2\; Lpp219\; Lpp14\; CNCM I-4649\; N1115\; ATCC 25302\; Lpp221\; Lpp48\; Lpp43\; Lpp49\; Lpp229\; Lpp48\; Lpp43\; Lpp71\; Lpp225\; Lpp7\; JCM 8130\; Lpp123\; CRF28\; Lpp37\; Lpp230\; Lpp70 subsp. tolerans Lpl7\; Lpl14

Relationship

Family : Duf_915

Block : X

Position in NCBI Life Tree : Lactobacillus paracasei

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Bacteria N E > Terrabacteria group N E > Firmicutes N E > Bacilli N E > Lactobacillales N E > Lactobacillaceae N E > Lactobacillus N E > Lactobacillus casei group N E > Lactobacillus paracasei N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

MSGWFWIVAA IGLVVVVGGL ADYLLLARPG YQPVPLVMDP VPTLFIPGHL GTRYSFGHML WRLQRRYGLS KDVVAIVAPD GKVHLRGQLN LNHHAAVQVL FTDKAVRPAA QLHGLEKVIA ALQTQQAFAE VNIVGHSMGG VTAVLYLLSK PTVPVANLVT IAAPMNDLEV AQRSPILNWR LTRTGPEHAA PIYQQFQKTI GNLPANLRWL NIAGDLLIGG RHDGEVAINS SFAIRYLVKD RIKDYTEVVI RGPRAAHSLL HENRLVDHDI VEYLWQRQRD F

References (10)

Title : Whole Genome Sequence of the Probiotic Strain Lactobacillus paracasei N1115, Isolated from Traditional Chinese Fermented Milk - Wang_2014_Genome.Announc_2_e00059
Author(s) : Wang S , Zhu H , He F , Luo Y , Kang Z , Lu C , Feng L , Lu X , Xue Y , Wang H
Ref : Genome Announc , 2 : , 2014
PubMedID: 24625864
Gene_locus related to this paper: lacc3-q03b36 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Genome Sequence Analysis of the Biogenic Amine-Degrading Strain Lactobacillus casei 5b - Ladero_2014_Genome.Announc_2_e01199
Author(s) : Ladero V , Herrero-Fresno A , Martinez N , Del Rio B , Linares DM , Fernandez M , Martin MC , Alvarez MA
Ref : Genome Announc , 2 : , 2014
PubMedID: 24435875
Gene_locus related to this paper: lacc3-q03b36 , laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Genomic adaptation of the Lactobacillus casei group - Toh_2013_PLoS.One_8_e75073
Author(s) : Toh H , Oshima K , Nakano A , Takahata M , Murakami M , Takaki T , Nishiyama H , Igimi S , Hattori M , Morita H
Ref : PLoS ONE , 8 :e75073 , 2013
PubMedID: 24116025
Gene_locus related to this paper: lacc3-q03b36 , laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Complete Genome Sequence of the Probiotic Strain Lactobacillus casei (Formerly Lactobacillus paracasei) LOCK919 - Koryszewska-Baginska_2013_Genome.Announc_1_e00758
Author(s) : Koryszewska-Baginska A , Aleksandrzak-Piekarczyk T , Bardowski J
Ref : Genome Announc , 1 : , 2013
PubMedID: 24072862
Gene_locus related to this paper: lacc3-q03b36 , laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88 , lacca-s4zmx9

Title : Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation - Broadbent_2012_BMC.Genomics_13_533
Author(s) : Broadbent JR , Neeno-Eckwall EC , Stahl B , Tandee K , Cai H , Morovic W , Horvath P , Heidenreich J , Perna NT , Barrangou R , Steele JL
Ref : BMC Genomics , 13 :533 , 2012
PubMedID: 23035691
Gene_locus related to this paper: lacc3-q03b36 , laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Draft genome sequence of Lactobacillus casei W56 - Hochwind_2012_J.Bacteriol_194_6638
Author(s) : Hochwind K , Weinmaier T , Schmid M , van Hemert S , Hartmann A , Rattei T , Rothballer M
Ref : Journal of Bacteriology , 194 :6638 , 2012
PubMedID: 23144392
Gene_locus related to this paper: laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Complete genome sequence of the probiotic bacterium Lactobacillus casei LC2W - Chen_2011_J.Bacteriol_193_3419
Author(s) : Chen C , Ai L , Zhou F , Wang L , Zhang H , Chen W , Guo B
Ref : Journal of Bacteriology , 193 :3419 , 2011
PubMedID: 21515769
Gene_locus related to this paper: lacc3-q03b36 , lacc3-q035l1 , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Complete genome sequence of the probiotic strain Lactobacillus casei BD-II - Ai_2011_J.Bacteriol_193_3160
Author(s) : Ai L , Chen C , Zhou F , Wang L , Zhang H , Chen W , Guo B
Ref : Journal of Bacteriology , 193 :3160 , 2011
PubMedID: 21478345
Gene_locus related to this paper: lacc3-q03b36 , lacc3-q035l1 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Complete genome sequence of Lactobacillus casei Zhang, a new probiotic strain isolated from traditional homemade koumiss in Inner Mongolia, China - Zhang_2010_J.Bacteriol_192_5268
Author(s) : Zhang W , Yu D , Sun Z , Wu R , Chen X , Chen W , Meng H , Hu S , Zhang H
Ref : Journal of Bacteriology , 192 :5268 , 2010
PubMedID: 20675486
Gene_locus related to this paper: lacc3-q03b36 , lacc3-q035l1 , laccb-b3wcx2 , lacrh-pepr , lacca-b5qt93 , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88

Title : Comparative genomics of the lactic acid bacteria - Makarova_2006_Proc.Natl.Acad.Sci.U.S.A_103_15611
Author(s) : Makarova K , Slesarev A , Wolf Y , Sorokin A , Mirkin B , Koonin E , Pavlov A , Pavlova N , Karamychev V , Polouchine N , Shakhova V , Grigoriev I , Lou Y , Rohksar D , Lucas S , Huang K , Goodstein DM , Hawkins T , Plengvidhya V , Welker D , Hughes J , Goh Y , Benson A , Baldwin K , Lee JH , Diaz-Muniz I , Dosti B , Smeianov V , Wechter W , Barabote R , Lorca G , Altermann E , Barrangou R , Ganesan B , Xie Y , Rawsthorne H , Tamir D , Parker C , Breidt F , Broadbent J , Hutkins R , O'Sullivan D , Steele J , Unlu G , Saier M , Klaenhammer T , Richardson P , Kozyavkin S , Weimer B , Mills D
Ref : Proc Natl Acad Sci U S A , 103 :15611 , 2006
PubMedID: 17030793
Gene_locus related to this paper: 9laco-c0xef2 , lacba-pepx , lacba-q03pm4 , lacba-q03sl1 , lacc3-pepx , lacc3-q03b36 , lacc3-q033u9 , lacc3-q035l1 , lacc3-q036j3 , lacc3-q036j8 , laccb-b3wcx2 , lacda-q1g8l1 , lacdb-q04b33 , lacdb-q04bn2 , lacdb-q04ci8 , lacdb-q04cw3 , lacdl-pepx , lacdl-pip , lacga-q040j4 , lacga-q040j9 , lacga-q040s2 , lacga-q042h9 , lacga-q043a3 , lacga-q043m1 , lacga-q045l3 , lacga-q046w1 , lacga-q047a5 , lacjo-q74hh0 , lacjo-q74ii3 , lacla-pepx , laclk-d2bl62 , lacls-q02y15 , lacls-q030e4 , lacls-q030p2 , lacrh-pepr , leumc-c2kjv5 , leumm-q03x93 , leumm-q03y60 , leumm-q03y71 , leumm-q03z72 , oenob-q04d10 , oenob-q04f06 , oenob-q04f19 , oenob-q04fw8 , oenob-q04ga3 , oenob-q04h47 , oenoe-a0nif9 , oenoe-a0nl98 , oenoe-d3lb54 , pedpa-pepx , pedpa-q03gh4 , pedpa-q03h47 , pedpa-q03hj2 , strt1-q5lz16 , strt1-q5lza1 , strt2-q5m420 , strtr-pepx , oenoe-k6pl10 , lacba-pip , lacca-k0n1x0 , lacpa-s2ter8 , lacpa-s2rz88 , pedpa-q03hz6 , oenob-q04dp7