Gene_Locus Report

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Gene_locus Report for: agrtu-ATU1572

Agrobacterium tumefaciens (strain C58 / ATCC 33970) hydrolase

Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Agrobacterium tumefaciens
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhizobiales: N E > Rhizobiaceae: N E > Rhizobium/Agrobacterium group: N E > Agrobacterium: N E > Agrobacterium tumefaciens complex: N E > Agrobacterium tumefaciens: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 2 more: AE009115, AE008080, NP_354571
1 UniProt : Q7CYY4
1 UniProt : Q7CYY4
1 Interpro : Q7CYY4
1 Prodom : Q7CYY4
1 Pfam : Q7CYY4
1 PIRSF : Q7CYY4
1 SUPERFAM : Q7CYY4
Sequence
Graphical view for this peptide sequence: agrtu-ATU1572
Colored MSA for 6_AlphaBeta_hydrolase (raw)
MSLMNLNLPQFSDFSHDGLRLAYFDEGDPAGDPVLLIHGFASSANVNWVH
PGWVKTLGEAGYRVIAIDNRGHGASDKPHDSEAYYPSVMAGDAVALLNHL
GIAETHVMGYSMGARISAFLAMAHPERVRSLVFGGLGIGMVEGVGDWDPI
AEALLAPSLDVVTHERGRMFRAFADQTKSDRLALAACIETSRVLVTREQA
QKIDAPTLIAVGTKDDIAGSGAELAAIMPHARAIDIPGRDHMLAVGDRVF
KAAVLEFYRSL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSLMNLNLPQFSDFSHDGLRLAYFDEGDPAGDPVLLIHGFASSANVNWVH
PGWVKTLGEAGYRVIAIDNRGHGASDKPHDSEAYYPSVMAGDAVALLNHL
GIAETHVMGYSMGARISAFLAMAHPERVRSLVFGGLGIGMVEGVGDWDPI
AEALLAPSLDVVTHERGRMFRAFADQTKSDRLALAACIETSRVLVTREQA
QKIDAPTLIAVGTKDDIAGSGAELAAIMPHARAIDIPGRDHMLAVGDRVF
KAAVLEFYRSL


References
    Title: Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58
    Goodner B, Hinkle G, Gattung S, Miller N, Blanchard M, Qurollo B, Goldman BS, Cao Y, Askenazi M and Slater S <21 more author(s)>
    Ref: Science, 294:2323, 2001 : PubMed

            

    Title: The genome of the natural genetic engineer Agrobacterium tumefaciens C58
    Wood DW, Setubal JC, Kaul R, Monks DE, Kitajima JP, Okura VK, Zhou Y, Chen L, Wood GE and Nester EW <41 more author(s)>
    Ref: Science, 294:2317, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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