Gene_Locus Report

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Gene_locus Report for: trede-q73kp3

Treponema denticola hypothetical protein

Comment
Other strains: Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222), Abiotrophia defectiva ATCC 49176, Treponema vincentii ATCC 35580, Streptococcus anginosus F0211


Relationship
Family|Acyl-CoA_Thioesterase
Block| X
Position in NCBI Life Tree|Treponema denticola
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Spirochaetes: N E > Spirochaetia: N E > Spirochaetales: N E > Spirochaetaceae: N E > Treponema: N E > Treponema denticola: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AE017226
3 UniProt : Q73KP3, C8PPY1, E6J234
3 UniProt : Q73KP3, C8PPY1, E6J234
3 Interpro : Q73KP3, C8PPY1, E6J234
3 Pfam : Q73KP3, C8PPY1, E6J234
3 PIRSF : Q73KP3, C8PPY1, E6J234
3 SUPERFAM : Q73KP3, C8PPY1, E6J234
Sequence
Graphical view for this peptide sequence: trede-q73kp3
Colored MSA for Acyl-CoA_Thioesterase (raw)
MKKEIKTIEKDGYNGVYWPNPNGSKYCMIAMLGDDTKDMMAKGGVKWLQK
KGLNVLTMSPAPKDYGHHNYPLERFEKALAFLKTMGNEEIGIMGASTTGM
LALVAASYFSEITLTIAISPSDFVMEGFYQDGKDGAHERPGDGESSVSYH
GKPLPYLPYAYRHPEYWQKISEETKRRGAMVASRDLFDESEKRHPVQEAE
KIKVENIKGRILLIGAEDDVLWDTCKYIRRMENRLKERDADNSVVLMTYE
HGTHFIFPQTMLTGILPVGSGLFISMAFKEAKQYPKECKQTRIEVDERLS
EELKQWINSAR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKKEIKTIEKDGYNGVYWPNPNGSKYCMIAMLGDDTKDMMAKGGVKWLQK
KGLNVLTMSPAPKDYGHHNYPLERFEKALAFLKTMGNEEIGIMGASTTGM
LALVAASYFSEITLTIAISPSDFVMEGFYQDGKDGAHERPGDGESSVSYH
GKPLPYLPYAYRHPEYWQKISEETKRRGAMVASRDLFDESEKRHPVQEAE
KIKVENIKGRILLIGAEDDVLWDTCKYIRRMENRLKERDADNSVVLMTYE
HGTHFIFPQTMLTGILPVGSGLFISMAFKEAKQYPKECKQTRIEVDERLS
EELKQWINSAR


Reference
    Title: Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes
    Seshadri R, Myers GS, Tettelin H, Eisen JA, Heidelberg JF, Dodson RJ, Davidsen TM, DeBoy RT, Fouts DE and Paulsen IT <29 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 101:5646, 2004 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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