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References (18)

Title : Comparative genomic hybridization and transcriptome analysis with a pan-genome microarray reveal distinctions between JP2 and non-JP2 genotypes of Aggregatibacter actinomycetemcomitans - Huang_2013_Mol.Oral.Microbiol_28_1
Author(s) : Huang Y , Kittichotirat W , Mayer MP , Hall R , Bumgarner R , Chen C
Ref : Mol Oral Microbiol , 28 :1 , 2013
Abstract :
PubMedSearch : Huang_2013_Mol.Oral.Microbiol_28_1
PubMedID: 23194436
Gene_locus related to this paper: aggac-i1xqw9 , aggad-c9r4e8

Title : Comparative genomic hybridization and transcriptome analysis with a pan-genome microarray reveal distinctions between JP2 and non-JP2 genotypes of Aggregatibacter actinomycetemcomitans - Huang_2013_Mol.Oral.Microbiol_28_1
Author(s) : Huang Y , Kittichotirat W , Mayer MP , Hall R , Bumgarner R , Chen C
Ref : Mol Oral Microbiol , 28 :1 , 2013
Abstract :
PubMedSearch : Huang_2013_Mol.Oral.Microbiol_28_1
PubMedID: 23194436
Gene_locus related to this paper: aggac-i1xqw9 , aggad-c9r4e8

Title : Comparative genomic hybridization and transcriptome analysis with a pan-genome microarray reveal distinctions between JP2 and non-JP2 genotypes of Aggregatibacter actinomycetemcomitans - Huang_2013_Mol.Oral.Microbiol_28_1
Author(s) : Huang Y , Kittichotirat W , Mayer MP , Hall R , Bumgarner R , Chen C
Ref : Mol Oral Microbiol , 28 :1 , 2013
Abstract :
PubMedSearch : Huang_2013_Mol.Oral.Microbiol_28_1
PubMedID: 23194436
Gene_locus related to this paper: aggac-i1xqw9 , aggad-c9r4e8

Title : Genome sequence of a serotype b non-JP2 aggregatibacter actinomycetemcomitans strain, ANH9381, from a periodontally healthy individual - Chen_2012_J.Bacteriol_194_1837
Author(s) : Chen C , Kittichotirat W , Chen W , Downey JS , Bumgarner R
Ref : Journal of Bacteriology , 194 :1837 , 2012
Abstract :
PubMedSearch : Chen_2012_J.Bacteriol_194_1837
PubMedID: 22408240
Gene_locus related to this paper: aggac-g3zaa7 , aggac-i1xqw9 , aggad-c9r4e8

Title : Genome sequence of a serotype b non-JP2 aggregatibacter actinomycetemcomitans strain, ANH9381, from a periodontally healthy individual - Chen_2012_J.Bacteriol_194_1837
Author(s) : Chen C , Kittichotirat W , Chen W , Downey JS , Bumgarner R
Ref : Journal of Bacteriology , 194 :1837 , 2012
Abstract :
PubMedSearch : Chen_2012_J.Bacteriol_194_1837
PubMedID: 22408240
Gene_locus related to this paper: aggac-g3zaa7 , aggac-i1xqw9 , aggad-c9r4e8

Title : Genome sequence of a serotype b non-JP2 aggregatibacter actinomycetemcomitans strain, ANH9381, from a periodontally healthy individual - Chen_2012_J.Bacteriol_194_1837
Author(s) : Chen C , Kittichotirat W , Chen W , Downey JS , Bumgarner R
Ref : Journal of Bacteriology , 194 :1837 , 2012
Abstract :
PubMedSearch : Chen_2012_J.Bacteriol_194_1837
PubMedID: 22408240
Gene_locus related to this paper: aggac-g3zaa7 , aggac-i1xqw9 , aggad-c9r4e8

Title : Genome sequence of Methyloversatilis universalis FAM5T, a methylotrophic representative of the order Rhodocyclales - Kittichotirat_2011_J.Bacteriol_193_4541
Author(s) : Kittichotirat W , Good NM , Hall R , Bringel F , Lajus A , Medigue C , Smalley NE , Beck D , Bumgarner R , Vuilleumier S , Kalyuzhnaya MG
Ref : Journal of Bacteriology , 193 :4541 , 2011
Abstract :
PubMedSearch : Kittichotirat_2011_J.Bacteriol_193_4541
PubMedID: 21725020
Gene_locus related to this paper: 9rhoo-f5rf80 , metuf-f5rhz8 , metuf-f5r7b6

Title : Genome sequence of Methyloversatilis universalis FAM5T, a methylotrophic representative of the order Rhodocyclales - Kittichotirat_2011_J.Bacteriol_193_4541
Author(s) : Kittichotirat W , Good NM , Hall R , Bringel F , Lajus A , Medigue C , Smalley NE , Beck D , Bumgarner R , Vuilleumier S , Kalyuzhnaya MG
Ref : Journal of Bacteriology , 193 :4541 , 2011
Abstract :
PubMedSearch : Kittichotirat_2011_J.Bacteriol_193_4541
PubMedID: 21725020
Gene_locus related to this paper: 9rhoo-f5rf80 , metuf-f5rhz8 , metuf-f5r7b6

Title : Genome sequence of Methyloversatilis universalis FAM5T, a methylotrophic representative of the order Rhodocyclales - Kittichotirat_2011_J.Bacteriol_193_4541
Author(s) : Kittichotirat W , Good NM , Hall R , Bringel F , Lajus A , Medigue C , Smalley NE , Beck D , Bumgarner R , Vuilleumier S , Kalyuzhnaya MG
Ref : Journal of Bacteriology , 193 :4541 , 2011
Abstract :
PubMedSearch : Kittichotirat_2011_J.Bacteriol_193_4541
PubMedID: 21725020
Gene_locus related to this paper: 9rhoo-f5rf80 , metuf-f5rhz8 , metuf-f5r7b6

Title : Genome sequence of naturally competent Aggregatibacter actinomycetemcomitans serotype a strain D7S-1 - Chen_2010_J.Bacteriol_192_2643
Author(s) : Chen C , Kittichotirat W , Chen W , Downey JS , Si Y , Bumgarner R
Ref : Journal of Bacteriology , 192 :2643 , 2010
Abstract :
PubMedSearch : Chen_2010_J.Bacteriol_192_2643
PubMedID: 20348265
Gene_locus related to this paper: aggac-d4ee60 , aggac-d4ee97 , aggac-g3zaa7 , aggac-i1xqw9 , aggad-c9r4e8

Title : Genome sequence of naturally competent Aggregatibacter actinomycetemcomitans serotype a strain D7S-1 - Chen_2010_J.Bacteriol_192_2643
Author(s) : Chen C , Kittichotirat W , Chen W , Downey JS , Si Y , Bumgarner R
Ref : Journal of Bacteriology , 192 :2643 , 2010
Abstract :
PubMedSearch : Chen_2010_J.Bacteriol_192_2643
PubMedID: 20348265
Gene_locus related to this paper: aggac-d4ee60 , aggac-d4ee97 , aggac-g3zaa7 , aggac-i1xqw9 , aggad-c9r4e8

Title : Genome sequence of naturally competent Aggregatibacter actinomycetemcomitans serotype a strain D7S-1 - Chen_2010_J.Bacteriol_192_2643
Author(s) : Chen C , Kittichotirat W , Chen W , Downey JS , Si Y , Bumgarner R
Ref : Journal of Bacteriology , 192 :2643 , 2010
Abstract :
PubMedSearch : Chen_2010_J.Bacteriol_192_2643
PubMedID: 20348265
Gene_locus related to this paper: aggac-d4ee60 , aggac-d4ee97 , aggac-g3zaa7 , aggac-i1xqw9 , aggad-c9r4e8

Title : Genome sequence of Aggregatibacter actinomycetemcomitans serotype c strain D11S-1 - Chen_2009_J.Bacteriol_191_7378
Author(s) : Chen C , Kittichotirat W , Si Y , Bumgarner R
Ref : Journal of Bacteriology , 191 :7378 , 2009
Abstract :
PubMedSearch : Chen_2009_J.Bacteriol_191_7378
PubMedID: 19820097
Gene_locus related to this paper: aggac-d4ee60 , aggac-g3zaa7 , aggad-c9r4e8 , aggad-c9r728

Title : Genome sequence of Aggregatibacter actinomycetemcomitans serotype c strain D11S-1 - Chen_2009_J.Bacteriol_191_7378
Author(s) : Chen C , Kittichotirat W , Si Y , Bumgarner R
Ref : Journal of Bacteriology , 191 :7378 , 2009
Abstract :
PubMedSearch : Chen_2009_J.Bacteriol_191_7378
PubMedID: 19820097
Gene_locus related to this paper: aggac-d4ee60 , aggac-g3zaa7 , aggad-c9r4e8 , aggad-c9r728

Title : Genome sequence of Aggregatibacter actinomycetemcomitans serotype c strain D11S-1 - Chen_2009_J.Bacteriol_191_7378
Author(s) : Chen C , Kittichotirat W , Si Y , Bumgarner R
Ref : Journal of Bacteriology , 191 :7378 , 2009
Abstract :
PubMedSearch : Chen_2009_J.Bacteriol_191_7378
PubMedID: 19820097
Gene_locus related to this paper: aggac-d4ee60 , aggac-g3zaa7 , aggad-c9r4e8 , aggad-c9r728

Title : Evolutionary and biomedical insights from the rhesus macaque genome - Gibbs_2007_Science_316_222
Author(s) : Gibbs RA , Rogers J , Katze MG , Bumgarner R , Weinstock GM , Mardis ER , Remington KA , Strausberg RL , Venter JC , Wilson RK , Batzer MA , Bustamante CD , Eichler EE , Hahn MW , Hardison RC , Makova KD , Miller W , Milosavljevic A , Palermo RE , Siepel A , Sikela JM , Attaway T , Bell S , Bernard KE , Buhay CJ , Chandrabose MN , Dao M , Davis C , Delehaunty KD , Ding Y , Dinh HH , Dugan-Rocha S , Fulton LA , Gabisi RA , Garner TT , Godfrey J , Hawes AC , Hernandez J , Hines S , Holder M , Hume J , Jhangiani SN , Joshi V , Khan ZM , Kirkness EF , Cree A , Fowler RG , Lee S , Lewis LR , Li Z , Liu YS , Moore SM , Muzny D , Nazareth LV , Ngo DN , Okwuonu GO , Pai G , Parker D , Paul HA , Pfannkoch C , Pohl CS , Rogers YH , Ruiz SJ , Sabo A , Santibanez J , Schneider BW , Smith SM , Sodergren E , Svatek AF , Utterback TR , Vattathil S , Warren W , White CS , Chinwalla AT , Feng Y , Halpern AL , Hillier LW , Huang X , Minx P , Nelson JO , Pepin KH , Qin X , Sutton GG , Venter E , Walenz BP , Wallis JW , Worley KC , Yang SP , Jones SM , Marra MA , Rocchi M , Schein JE , Baertsch R , Clarke L , Csuros M , Glasscock J , Harris RA , Havlak P , Jackson AR , Jiang H , Liu Y , Messina DN , Shen Y , Song HX , Wylie T , Zhang L , Birney E , Han K , Konkel MK , Lee J , Smit AF , Ullmer B , Wang H , Xing J , Burhans R , Cheng Z , Karro JE , Ma J , Raney B , She X , Cox MJ , Demuth JP , Dumas LJ , Han SG , Hopkins J , Karimpour-Fard A , Kim YH , Pollack JR , Vinar T , Addo-Quaye C , Degenhardt J , Denby A , Hubisz MJ , Indap A , Kosiol C , Lahn BT , Lawson HA , Marklein A , Nielsen R , Vallender EJ , Clark AG , Ferguson B , Hernandez RD , Hirani K , Kehrer-Sawatzki H , Kolb J , Patil S , Pu LL , Ren Y , Smith DG , Wheeler DA , Schenck I , Ball EV , Chen R , Cooper DN , Giardine B , Hsu F , Kent WJ , Lesk A , Nelson DL , O'Brien W E , Prufer K , Stenson PD , Wallace JC , Ke H , Liu XM , Wang P , Xiang AP , Yang F , Barber GP , Haussler D , Karolchik D , Kern AD , Kuhn RM , Smith KE , Zwieg AS
Ref : Science , 316 :222 , 2007
Abstract :
PubMedSearch : Gibbs_2007_Science_316_222
PubMedID: 17431167
Gene_locus related to this paper: macmu-3neur , macmu-ACHE , macmu-BCHE , macmu-f6rul6 , macmu-f6sz31 , macmu-f6the6 , macmu-f6unj2 , macmu-f6wtx1 , macmu-f6zkq5 , macmu-f7aa58 , macmu-f7ai42 , macmu-f7aim4 , macmu-f7buk8 , macmu-f7cfi8 , macmu-f7cnr2 , macmu-f7cu68 , macmu-f7flv1 , macmu-f7ggk1 , macmu-f7hir7 , macmu-g7n054 , macmu-KANSL3 , macmu-TEX30 , macmu-Y4neur , macmu-g7n4x3 , macmu-i2cy02 , macmu-f7ba84 , macmu-CES2 , macmu-h9er02 , macmu-a0a1d5rbr3 , macmu-a0a1d5q4k5 , macmu-g7mxj6 , macmu-f7dn71 , macmu-f7hkw9 , macmu-f7hm08 , macmu-g7mke4 , macmu-a0a1d5rh04 , macmu-h9fud6 , macmu-f6qwx1 , macmu-f7h4t2 , macmu-h9zaw9 , macmu-f7h550 , macmu-a0a1d5q9w1 , macmu-f7gkb9 , macmu-f7hp78 , macmu-a0a1d5qvu5 , macmu-f7fpd7 , macmu-f7gax6 , macmu-f7gay0 , macmu-f6pye7 , macmu-g7n9h5 , macmu-h9fr54 , macmu-f6wc85 , macmu-a0a1d5qd40 , macmu-g7nq76

Title : Evolutionary and biomedical insights from the rhesus macaque genome - Gibbs_2007_Science_316_222
Author(s) : Gibbs RA , Rogers J , Katze MG , Bumgarner R , Weinstock GM , Mardis ER , Remington KA , Strausberg RL , Venter JC , Wilson RK , Batzer MA , Bustamante CD , Eichler EE , Hahn MW , Hardison RC , Makova KD , Miller W , Milosavljevic A , Palermo RE , Siepel A , Sikela JM , Attaway T , Bell S , Bernard KE , Buhay CJ , Chandrabose MN , Dao M , Davis C , Delehaunty KD , Ding Y , Dinh HH , Dugan-Rocha S , Fulton LA , Gabisi RA , Garner TT , Godfrey J , Hawes AC , Hernandez J , Hines S , Holder M , Hume J , Jhangiani SN , Joshi V , Khan ZM , Kirkness EF , Cree A , Fowler RG , Lee S , Lewis LR , Li Z , Liu YS , Moore SM , Muzny D , Nazareth LV , Ngo DN , Okwuonu GO , Pai G , Parker D , Paul HA , Pfannkoch C , Pohl CS , Rogers YH , Ruiz SJ , Sabo A , Santibanez J , Schneider BW , Smith SM , Sodergren E , Svatek AF , Utterback TR , Vattathil S , Warren W , White CS , Chinwalla AT , Feng Y , Halpern AL , Hillier LW , Huang X , Minx P , Nelson JO , Pepin KH , Qin X , Sutton GG , Venter E , Walenz BP , Wallis JW , Worley KC , Yang SP , Jones SM , Marra MA , Rocchi M , Schein JE , Baertsch R , Clarke L , Csuros M , Glasscock J , Harris RA , Havlak P , Jackson AR , Jiang H , Liu Y , Messina DN , Shen Y , Song HX , Wylie T , Zhang L , Birney E , Han K , Konkel MK , Lee J , Smit AF , Ullmer B , Wang H , Xing J , Burhans R , Cheng Z , Karro JE , Ma J , Raney B , She X , Cox MJ , Demuth JP , Dumas LJ , Han SG , Hopkins J , Karimpour-Fard A , Kim YH , Pollack JR , Vinar T , Addo-Quaye C , Degenhardt J , Denby A , Hubisz MJ , Indap A , Kosiol C , Lahn BT , Lawson HA , Marklein A , Nielsen R , Vallender EJ , Clark AG , Ferguson B , Hernandez RD , Hirani K , Kehrer-Sawatzki H , Kolb J , Patil S , Pu LL , Ren Y , Smith DG , Wheeler DA , Schenck I , Ball EV , Chen R , Cooper DN , Giardine B , Hsu F , Kent WJ , Lesk A , Nelson DL , O'Brien W E , Prufer K , Stenson PD , Wallace JC , Ke H , Liu XM , Wang P , Xiang AP , Yang F , Barber GP , Haussler D , Karolchik D , Kern AD , Kuhn RM , Smith KE , Zwieg AS
Ref : Science , 316 :222 , 2007
Abstract :
PubMedSearch : Gibbs_2007_Science_316_222
PubMedID: 17431167
Gene_locus related to this paper: macmu-3neur , macmu-ACHE , macmu-BCHE , macmu-f6rul6 , macmu-f6sz31 , macmu-f6the6 , macmu-f6unj2 , macmu-f6wtx1 , macmu-f6zkq5 , macmu-f7aa58 , macmu-f7ai42 , macmu-f7aim4 , macmu-f7buk8 , macmu-f7cfi8 , macmu-f7cnr2 , macmu-f7cu68 , macmu-f7flv1 , macmu-f7ggk1 , macmu-f7hir7 , macmu-g7n054 , macmu-KANSL3 , macmu-TEX30 , macmu-Y4neur , macmu-g7n4x3 , macmu-i2cy02 , macmu-f7ba84 , macmu-CES2 , macmu-h9er02 , macmu-a0a1d5rbr3 , macmu-a0a1d5q4k5 , macmu-g7mxj6 , macmu-f7dn71 , macmu-f7hkw9 , macmu-f7hm08 , macmu-g7mke4 , macmu-a0a1d5rh04 , macmu-h9fud6 , macmu-f6qwx1 , macmu-f7h4t2 , macmu-h9zaw9 , macmu-f7h550 , macmu-a0a1d5q9w1 , macmu-f7gkb9 , macmu-f7hp78 , macmu-a0a1d5qvu5 , macmu-f7fpd7 , macmu-f7gax6 , macmu-f7gay0 , macmu-f6pye7 , macmu-g7n9h5 , macmu-h9fr54 , macmu-f6wc85 , macmu-a0a1d5qd40 , macmu-g7nq76

Title : Evolutionary and biomedical insights from the rhesus macaque genome - Gibbs_2007_Science_316_222
Author(s) : Gibbs RA , Rogers J , Katze MG , Bumgarner R , Weinstock GM , Mardis ER , Remington KA , Strausberg RL , Venter JC , Wilson RK , Batzer MA , Bustamante CD , Eichler EE , Hahn MW , Hardison RC , Makova KD , Miller W , Milosavljevic A , Palermo RE , Siepel A , Sikela JM , Attaway T , Bell S , Bernard KE , Buhay CJ , Chandrabose MN , Dao M , Davis C , Delehaunty KD , Ding Y , Dinh HH , Dugan-Rocha S , Fulton LA , Gabisi RA , Garner TT , Godfrey J , Hawes AC , Hernandez J , Hines S , Holder M , Hume J , Jhangiani SN , Joshi V , Khan ZM , Kirkness EF , Cree A , Fowler RG , Lee S , Lewis LR , Li Z , Liu YS , Moore SM , Muzny D , Nazareth LV , Ngo DN , Okwuonu GO , Pai G , Parker D , Paul HA , Pfannkoch C , Pohl CS , Rogers YH , Ruiz SJ , Sabo A , Santibanez J , Schneider BW , Smith SM , Sodergren E , Svatek AF , Utterback TR , Vattathil S , Warren W , White CS , Chinwalla AT , Feng Y , Halpern AL , Hillier LW , Huang X , Minx P , Nelson JO , Pepin KH , Qin X , Sutton GG , Venter E , Walenz BP , Wallis JW , Worley KC , Yang SP , Jones SM , Marra MA , Rocchi M , Schein JE , Baertsch R , Clarke L , Csuros M , Glasscock J , Harris RA , Havlak P , Jackson AR , Jiang H , Liu Y , Messina DN , Shen Y , Song HX , Wylie T , Zhang L , Birney E , Han K , Konkel MK , Lee J , Smit AF , Ullmer B , Wang H , Xing J , Burhans R , Cheng Z , Karro JE , Ma J , Raney B , She X , Cox MJ , Demuth JP , Dumas LJ , Han SG , Hopkins J , Karimpour-Fard A , Kim YH , Pollack JR , Vinar T , Addo-Quaye C , Degenhardt J , Denby A , Hubisz MJ , Indap A , Kosiol C , Lahn BT , Lawson HA , Marklein A , Nielsen R , Vallender EJ , Clark AG , Ferguson B , Hernandez RD , Hirani K , Kehrer-Sawatzki H , Kolb J , Patil S , Pu LL , Ren Y , Smith DG , Wheeler DA , Schenck I , Ball EV , Chen R , Cooper DN , Giardine B , Hsu F , Kent WJ , Lesk A , Nelson DL , O'Brien W E , Prufer K , Stenson PD , Wallace JC , Ke H , Liu XM , Wang P , Xiang AP , Yang F , Barber GP , Haussler D , Karolchik D , Kern AD , Kuhn RM , Smith KE , Zwieg AS
Ref : Science , 316 :222 , 2007
Abstract :
PubMedSearch : Gibbs_2007_Science_316_222
PubMedID: 17431167
Gene_locus related to this paper: macmu-3neur , macmu-ACHE , macmu-BCHE , macmu-f6rul6 , macmu-f6sz31 , macmu-f6the6 , macmu-f6unj2 , macmu-f6wtx1 , macmu-f6zkq5 , macmu-f7aa58 , macmu-f7ai42 , macmu-f7aim4 , macmu-f7buk8 , macmu-f7cfi8 , macmu-f7cnr2 , macmu-f7cu68 , macmu-f7flv1 , macmu-f7ggk1 , macmu-f7hir7 , macmu-g7n054 , macmu-KANSL3 , macmu-TEX30 , macmu-Y4neur , macmu-g7n4x3 , macmu-i2cy02 , macmu-f7ba84 , macmu-CES2 , macmu-h9er02 , macmu-a0a1d5rbr3 , macmu-a0a1d5q4k5 , macmu-g7mxj6 , macmu-f7dn71 , macmu-f7hkw9 , macmu-f7hm08 , macmu-g7mke4 , macmu-a0a1d5rh04 , macmu-h9fud6 , macmu-f6qwx1 , macmu-f7h4t2 , macmu-h9zaw9 , macmu-f7h550 , macmu-a0a1d5q9w1 , macmu-f7gkb9 , macmu-f7hp78 , macmu-a0a1d5qvu5 , macmu-f7fpd7 , macmu-f7gax6 , macmu-f7gay0 , macmu-f6pye7 , macmu-g7n9h5 , macmu-h9fr54 , macmu-f6wc85 , macmu-a0a1d5qd40 , macmu-g7nq76