cioin-cxest

Ciona intestinalis cDNA, clone:cicl047k12 gene ci0100143569

Comment

ci0100143569 is on scaffold_38(400Kb) there is another short scaffold of 3.6kb containing at one end a little of the same sequence Scaffold_2439 the gene is partial ci0100148102. Differences between XM_002123632 and F6UTQ2

Relationship

Family : Carb_B_Chordata

Block : C

Position in NCBI Life Tree : Ciona intestinalis

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Eukaryota N E > Opisthokonta N E > Metazoa N E > Eumetazoa N E > Bilateria N E > Deuterostomia N E > Chordata N E > Tunicata N E > Ascidiacea N E > Enterogona N E > Phlebobranchia N E > Cionidae N E > Ciona N E > Ciona intestinalis N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

MAHSTFVLLC IFILSTLFSN VVDATEELNV KTLYGWVEGT TRRALESNRD VYSFFGIPYA RSPDYTFRFR PPVDPWVWEG VKDTTNQNVP FCSQDPVLLK NLRQDTWFSY VIDANNTMKE DCLTVNVFSP TKPSKVQQTK KLPVLVWIHG GGLSFTATTN KLWMLPAFED VVVVTIQYRL GVFGFLTLED NWAPGNTGLL DQVKALEWVR DNIQAFGGDP EKVTIFGQSS GGFSVSAHML SPRSRGLFHR AFAMSGVAIL PYNDPEFSKK NPAADALKLA EKLGCKFWDN AHTSTCLRNH VTTSEMLAAT KSLQMRFGTN IDVDFFPDFP RLTANAFNKS IPLMLGVVSG EMDFILGEKM IPNYNKVSSH TPKSAESLIR NDLAKYHPQL KNPDRIVREY LTNIKPGIDT VKAESDYLTD SWYTSKLVTV ANAHKGAGGN VYMYEFTKQP SLNQGLKPRL VDFKRADHCD DMIFFQGIPF LPGLKERGLT FTQGEKDLSR KLMNLLANFA RNGSPNSIGS FSWPQYPEYV LINDTMSVHS GFREQKVKLF FEN

References (2)

Title : The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins - Dehal_2002_Science_298_2157
Author(s) : Dehal P , Satou Y , Campbell RK , Chapman J , Degnan B , De Tomaso A , Davidson B , Di Gregorio A , Gelpke M , Goodstein DM , Harafuji N , Hastings KE , Ho I , Hotta K , Huang W , Kawashima T , Lemaire P , Martinez D , Meinertzhagen IA , Necula S , Nonaka M , Putnam N , Rash S , Saiga H , Satake M , Terry A , Yamada L , Wang HG , Awazu S , Azumi K , Boore J , Branno M , Chin-Bow S , DeSantis R , Doyle S , Francino P , Keys DN , Haga S , Hayashi H , Hino K , Imai KS , Inaba K , Kano S , Kobayashi K , Kobayashi M , Lee BI , Makabe KW , Manohar C , Matassi G , Medina M , Mochizuki Y , Mount S , Morishita T , Miura S , Nakayama A , Nishizaka S , Nomoto H , Ohta F , Oishi K , Rigoutsos I , Sano M , Sasaki A , Sasakura Y , Shoguchi E , Shin-I T , Spagnuolo A , Stainier D , Suzuki MM , Tassy O , Takatori N , Tokuoka M , Yagi K , Yoshizaki F , Wada S , Zhang C , Hyatt PD , Larimer F , Detter C , Doggett N , Glavina T , Hawkins T , Richardson P , Lucas S , Kohara Y , Levine M , Satoh N , Rokhsar DS
Ref : Science , 298 :2157 , 2002
PubMedID: 12481130
Gene_locus related to this paper: cioin-141645 , cioin-147959 , cioin-150181 , cioin-154370 , cioin-ACHE1 , cioin-ACHE2 , cioin-cxest , cioin-f6qcp0 , cioin-f6r8z1 , cioin-f6u176 , cioin-f6vac9 , cioin-f6x584 , cioin-f6xa69 , cioin-f6y403 , cioin-h2xqb4 , cioin-H2XTI0 , cioin-F6T1M3 , cioin-H2XUP7 , cioin-CIN.7233 , cioin-F6V269 , cioin-Cin16330 , cioin-h2xua2 , cioin-f6vaa5 , cioin-f6v9x6 , cioin-f6swc9 , cioin-f7amz2 , cioin-f6s021 , cioin-h2xxq9 , cioin-h2xne6 , cioin-f6ynr2

Title : A cDNA resource from the basal chordate Ciona intestinalis -
Author(s) : Satou Y , Yamada L , Mochizuki Y , Takatori N , Kawashima T , Sasaki A , Hamaguchi M , Awazu S , Yagi K , Sasakura Y , Nakayama A , Ishikawa H , Inaba K , Satoh N
Ref : Genesis , 33 :153 , 2002
PubMedID: 12203911
Gene_locus related to this paper: cioin-141645 , cioin-147959 , cioin-150181 , cioin-154370 , cioin-ACHE1 , cioin-ACHE2 , cioin-cxest , cioin-F6V269