Gene_Locus Report

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Gene_locus Report for: psepu-PP3404

Pseudomonas putida, conserved hypothetical protein

Comment
Other strains: Pseudomonas putida (strain KT2440 and strain F1)


Relationship
Family|AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Pseudomonas putida
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Pseudomonadales: N E > Pseudomonadaceae: N E > Pseudomonas: N E > Pseudomonas putida group: N E > Pseudomonas putida: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AE016786, AALM01000002
1 UniProt : Q88HF5
1 Interpro : Q88HF5
1 Pfam : Q88HF5
1 PIRSF : Q88HF5
1 SUPERFAM : Q88HF5
Sequence
Graphical view for this peptide sequence: psepu-PP3404
Colored MSA for AlphaBeta_hydrolase (raw)
MQLIPWSHECAEGFTLRGWRTPASGKPLLHFLHGNGFCCLAYQPLLMRLG
EHFDLWLCDVQGHGDSDHGGVFRGWNRTAALAVEAFQGGRGEYGDVQRFA
AGHSFGGVLTGLILGSEPQLFARAVLLDPVLFSRRMIGVMGAAALVGLHQ
RHALARKAASRRSHWPDRESALASLEGRGIFKGWTHAALQAYVEHAIGDC
GEAVVLKCRPSREVEIFSSFPKRMWASLAAIRTPTRVLYGEDTYPFVPHS
VNRLALLNRNVTARQVPGGHCFMQEDPAMAAEQVLDFLQG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MQLIPWSHECAEGFTLRGWRTPASGKPLLHFLHGNGFCCLAYQPLLMRLG
EHFDLWLCDVQGHGDSDHGGVFRGWNRTAALAVEAFQGGRGEYGDVQRFA
AGHSFGGVLTGLILGSEPQLFARAVLLDPVLFSRRMIGVMGAAALVGLHQ
RHALARKAASRRSHWPDRESALASLEGRGIFKGWTHAALQAYVEHAIGDC
GEAVVLKCRPSREVEIFSSFPKRMWASLAAIRTPTRVLYGEDTYPFVPHS
VNRLALLNRNVTARQVPGGHCFMQEDPAMAAEQVLDFLQG


Reference
    Title: Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
    Nelson KE, Weinel C, Paulsen IT, Dodson RJ, Hilbert H, Martins dos Santos VA, Fouts DE, Gill SR, Pop M and Fraser CM <33 more author(s)>
    Ref: Environ Microbiol, 4:799, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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