Gene_Locus Report

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Gene_locus Report for: xanax-XAC0262

Xanthomonas axonopodis, Xanthomonas campestris, Xanthomonas vesicatoria dipeptidyl aminopeptidase

Comment
Other strains: Xanthomonas axonopodis (pv. citri) and Xanthomonas campestris pv. vesicatoria (strain 85-10) Xanthomonas vesicatoria ATCC 35937


Relationship
Family|Prolyl_oligopeptidase_S9
Block| X
Position in NCBI Life Tree|Xanthomonas axonopodis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Xanthomonadales: N E > Xanthomonadaceae: N E > Xanthomonas: N E > Xanthomonas axonopodis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AE011651, AM039952
2 UniProt : Q3BZ12, F0B961
3 UniProt : Q8PQR0, Q3BZ12, F0B961
3 Interpro : Q8PQR0, Q3BZ12, F0B961
3 Pfam : Q8PQR0, Q3BZ12, F0B961
3 PIRSF : Q8PQR0, Q3BZ12, F0B961
3 SUPERFAM : Q8PQR0, Q3BZ12, F0B961
Sequence
Graphical view for this peptide sequence: xanax-XAC0262
Colored MSA for Prolyl_oligopeptidase_S9 (raw)
MQRLLLVSSMLLALSACSDKPAPAPEKAAAPAPATTAPAAPPALITRDAL
FGNPERANVSISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTAR
GIRNYFWTYQPNTLLYLRDNGGDEDFHLFSVNLTDGSSKDLTPFKKTNAE
VYRVSAQHPESIMVGMNDRDAKWHDLYRVDLASGKRTLVQKNTGSLDAYL
LDGGYQLRYATRATDDAGRELLVPDGDGWKSVDRIPFEDVTNTAPEGLTE
DGKTLYMQDSRNRDTAALYAIDTASNTRTLLFENPRADVGATLNDPKTGA
VQAVSTDYLREEWKPLDNGIAADLQKLKSLGGGDASVAARTLDDRIWIVG
YSAAETPLTYYRYDRADGGKLTKLFSARPALEGKPLVPMWPQELTARDGL
KLISYLTLPAEADANHDGKADKLVLFVHGGPWARDSYGYGPYEQWLANRG
YAVLAVNFRGSTGFGKAFTNAGNGEWAGKMHDDLLDAVQWAVKQGVTKPD
EVAIMGGSYGGYATLVGMTFTPDAFKCGVDIVGPANLNTLLGTVPPYWAS
FYKQLTRRMGDPATEAGKQWLTDRSPLTRVDKISKPLLIGQGANDPRVKQ
AESDQIVNAMKAKNIPVTYVLFPDEGHGFRRPENSKAFNAVTESFLSQCL
GGRLQPIGADLEGSSITVPEGADKINGLGEALKTHTQAIRK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MQRLLLVSSMLLALSACSDKPAPAPEKAAAPAPATTAPAAPPALITRDAL
FGNPERANVSISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTAR
GIRNYFWTYQPNTLLYLRDNGGDEDFHLFSVNLTDGSSKDLTPFKKTNAE
VYRVSAQHPESIMVGMNDRDAKWHDLYRVDLASGKRTLVQKNTGSLDAYL
LDGGYQLRYATRATDDAGRELLVPDGDGWKSVDRIPFEDVTNTAPEGLTE
DGKTLYMQDSRNRDTAALYAIDTASNTRTLLFENPRADVGATLNDPKTGA
VQAVSTDYLREEWKPLDNGIAADLQKLKSLGGGDASVAARTLDDRIWIVG
YSAAETPLTYYRYDRADGGKLTKLFSARPALEGKPLVPMWPQELTARDGL
KLISYLTLPAEADANHDGKADKLVLFVHGGPWARDSYGYGPYEQWLANRG
YAVLAVNFRGSTGFGKAFTNAGNGEWAGKMHDDLLDAVQWAVKQGVTKPD
EVAIMGGSYGGYATLVGMTFTPDAFKCGVDIVGPANLNTLLGTVPPYWAS
FYKQLTRRMGDPATEAGKQWLTDRSPLTRVDKISKPLLIGQGANDPRVKQ
AESDQIVNAMKAKNIPVTYVLFPDEGHGFRRPENSKAFNAVTESFLSQCL
GGRLQPIGADLEGSSITVPEGADKINGLGEALKTHTQAIRK


References
    Title: Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper
    Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, Ryan RP, Sharlach M, Behlau F, Dow JM and Jones JB <8 more author(s)>
    Ref: BMC Genomics, 12:146, 2011 : PubMed

            

    Title: Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
    Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A and Kaiser O <19 more author(s)>
    Ref: Journal of Bacteriology, 187:7254, 2005 : PubMed

            

    Title: Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
    da Silva ACR, Ferro JA, Reinach FC, Farah CS, Furlan LR, Quaggio RB, Monteiro-Vitorello CB, Van Sluys MA, Almeida Jr NF and Kitajima JP <55 more author(s)>
    Ref: Nature, 417:459, 2002 : PubMed

            


Other Papers


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Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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