Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: yerpe-PLDB

Yersinia pestis, Yersinia pseudotuberculosis, Yersinia aldovae, putative lysophospholipase l(2)(EC 3.1.1.5)

Comment
Other strains: Yersinia pestis (Pestoides F;D106004;Pestoides A;Z176003;D182038;KIM D27;CA88-4125; biovars: Orientalis (India 195; PEXU2; IP275; F1991016; MG05-1020), Antiqua (Antiqua; Nepal516; E1979001; B42003004; UG05-0454; Angola), Mediaevalis (K1973002; Harbin 35)), Yersinia pseudotuberculosis serotypes (IB (PB1/+); O:3 (YPIII)), Yersinia aldovae ATCC 35236


Relationship
Family|Monoglyceridelipase_lysophospholip
Block| X
Position in NCBI Life Tree|Yersinia pestis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Enterobacterales: N E > Yersiniaceae: N E > Yersinia: N E > Yersinia pseudotuberculosis complex: N E > Yersinia pestis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 2 more: BX936398, AJ414159, AE013640
2 UniProt : Q7CKX6, Q66FY0
2 UniProt : Q7CKX6, Q66FY0
2 Interpro : Q7CKX6, Q66FY0
2 Prodom : Q7CKX6, Q66FY0
2 Pfam : Q7CKX6, Q66FY0
2 PIRSF : Q7CKX6, Q66FY0
2 SUPERFAM : Q7CKX6, Q66FY0
Sequence
Graphical view for this peptide sequence: yerpe-PLDB
Colored MSA for Monoglyceridelipase_lysophospholip (raw)
MLLGHHMNNWLTREEQFAAFINGPLLDFWQQRDEQTFMGVDNIPIRYVRF
RAPHHTQVVVVVPGRIESYVKYPEVAYDLFQQGYDVIVLDHRGQGRSGRM
LDDHNRGHVIKFDDYIEDFAQLVQIEITGSHYQQRFALAHSMGGAILTRF
LAREPDVFNAVALCAPMFGIHLPLPGWLARRIVNWAEGHQKLRDYYAIGT
GHWRPLPYLVNMLTHSRERYRRYLRQYSDTPEIRVGGPTYHWLRESLLVG
EQIIAEAEKITTPVLLLQASEDRVVHNPAHDAFSQAMTLAGHPCEGGRPQ
VIQGARHEILFERDTLRAEALSAILRFFAQHQSSVGH
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLLGHHMNNWLTREEQFAAFINGPLLDFWQQRDEQTFMGVDNIPIRYVRF
RAPHHTQVVVVVPGRIESYVKYPEVAYDLFQQGYDVIVLDHRGQGRSGRM
LDDHNRGHVIKFDDYIEDFAQLVQIEITGSHYQQRFALAHSMGGAILTRF
LAREPDVFNAVALCAPMFGIHLPLPGWLARRIVNWAEGHQKLRDYYAIGT
GHWRPLPYLVNMLTHSRERYRRYLRQYSDTPEIRVGGPTYHWLRESLLVG
EQIIAEAEKITTPVLLLQASEDRVVHNPAHDAFSQAMTLAGHPCEGGRPQ
VIQGARHEILFERDTLRAEALSAILRFFAQHQSSVGH


References
6 more
    Title: Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis
    Chain PS, Carniel E, Larimer FW, Lamerdin J, Stoutland PO, Regala WM, Georgescu AM, Vergez LM, Land ML and Garcia E <13 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 101:13826, 2004 : PubMed

            

    Title: Genome sequence of Yersinia pestis KIM
    Deng W, Burland V, Plunkett G, 3rd, Boutin A, Mayhew GF, Liss P, Perna NT, Rose DJ, Mau B and Perry RD <11 more author(s)>
    Ref: Journal of Bacteriology, 184:4601, 2002 : PubMed

            

    Title: Genome sequence of Yersinia pestis, the causative agent of plague.
    Parkhill J, Wren BW, Thomson NR, Titball RW, Holden MTG, Prentice MB, Sebaihia M, James KD, Churcher C and Barrell BG <25 more author(s)>
    Ref: Nature, 413:523, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer