Gene_Locus Report

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Gene_locus Report for: yerpe-dlhh

Yersinia pestis, Yersinia pseudotuberculosis, putative carboxymethylenebutenolidase (EC 3.1.1.45) (dlh)

Comment
Other strains: Yersinia pestis CA88-4125; D182038; Pestoides F; Z176003; D106004; Pestoides A; KIM D27; biovars Antiqua (E1979001; Nepal516; B42003004; Angola; Antiqua); UG05-0454), Orientalis (India 195; F1991016; MG05-1020; PEXU2; IP275) Mediaevalis (K1973002; Harbin 35), Yersinia pseudotuberculosis (serotype O:3 YPIII; serotype IB PB1/+; serotype O:1b IP 31758)


Relationship
Family|Dienelactone_hydrolase
Block| X
Position in NCBI Life Tree|Yersinia pestis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Enterobacterales: N E > Yersiniaceae: N E > Yersinia: N E > Yersinia pseudotuberculosis complex: N E > Yersinia pestis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : BX936398, AJ414159
2 UniProt : Q8ZAL4, Q66FT6
2 UniProt : Q8ZAL4, Q66FT6
2 Interpro : Q8ZAL4, Q66FT6
2 Pfam : Q8ZAL4, Q66FT6
2 PIRSF : Q8ZAL4, Q66FT6
2 SUPERFAM : Q8ZAL4, Q66FT6
Sequence
Graphical view for this peptide sequence: yerpe-dlhh
Colored MSA for Dienelactone_hydrolase (raw)
MATAHHTDQLHSLQTHGIHCGETTIPSQGDELPAYIAKPDQHTGPYPVVI
VVQEIFGVHEHIQDICRRLAKQGYLAIAPELYFRQGDAKDYSNINELVNN
LVKKVPDRQVLVDLDHTAHWASRHGGDTKKLAITGFCWGGRIAWLYAAHN
PQLKAAVAWYGKLVGEKTLFLPKYPVDVAIDLCAPVLGLYGGKDTSIPAE
HIETMRQALRAANADAEIIVYPEAGHAFNADYRPSYHAESAQDGWQRMLD
WFTQHGVSAIPIPEETQ
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MATAHHTDQLHSLQTHGIHCGETTIPSQGDELPAYIAKPDQHTGPYPVVI
VVQEIFGVHEHIQDICRRLAKQGYLAIAPELYFRQGDAKDYSNINELVNN
LVKKVPDRQVLVDLDHTAHWASRHGGDTKKLAITGFCWGGRIAWLYAAHN
PQLKAAVAWYGKLVGEKTLFLPKYPVDVAIDLCAPVLGLYGGKDTSIPAE
HIETMRQALRAANADAEIIVYPEAGHAFNADYRPSYHAESAQDGWQRMLD
WFTQHGVSAIPIPEETQ


References
5 more
    Title: Draft genome sequences of Yersinia pestis isolates from natural foci of endemic plague in China
    Eppinger M, Guo Z, Sebastian Y, Song Y, Lindler LE, Yang R, Ravel J
    Ref: Journal of Bacteriology, 191:7628, 2009 : PubMed

            

    Title: Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis
    Chain PS, Carniel E, Larimer FW, Lamerdin J, Stoutland PO, Regala WM, Georgescu AM, Vergez LM, Land ML and Garcia E <13 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 101:13826, 2004 : PubMed

            

    Title: Genome sequence of Yersinia pestis, the causative agent of plague.
    Parkhill J, Wren BW, Thomson NR, Titball RW, Holden MTG, Prentice MB, Sebaihia M, James KD, Churcher C and Barrell BG <25 more author(s)>
    Ref: Nature, 413:523, 2001 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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